Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0554400-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:27733390:27739327:-1 gene:Os08g0554400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 6 description:Zinc finger, C2H2-type domain containing protein. (Os08t0554400-01);Zinc finger, C2H2-type domain containing protein. (Os08t0554400-02)
Sequence	ATGGCAGCCGCCTCGTCTGCACACTACTTCGGTCTCGGCGAGCCGCAGATGCAGCAGCAG CAGCAGCAGCCTCCCCTGCAGAACAACGCGGCTGCTCCGGTCGCGGCCACGCCGCCGCCC AAGAAGAAGAGGAATCAGCCCGGGAATCCAAATCCTGATGCGGAGGTGGTGGCGCTGTCG CCGCACACGCTGCTGGCGACGAACAGGTTCGTGTGCGAGGTGTGCAACAAGGGGTTCCAG AGGGAGCAGAACCTGCAGCTGCACCGGCGAGGGCACAACCTGCCATGGAAGCTGAAGCAG AAGAACCCCAAGGAGACGCGGCGGCGGGTGTACCTGTGCCCGGAGCCGTCCTGCGTCCAC CACGACCCGTCGCGAGCCCTCGGCGACCTCACCGGCATCAAGAAGCACTACTCCCGCAAG CACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCAACAAGCGCTACGCCGTCCAGTCCGAC TGGAAGGCTCACTCCAAGACCTGCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTC TTCTCCAGGAGGGACAGCTTCATCACCCACCGCGCCTTCTGCGACGCGCTGGCGCAGGAG AGCGGCAGGATTATGCCACCCATGGGCGCCGCCCTGTACGCCGCCGCCGGCGCCGGCATG GCCATCGGCGGCCTCACCGGCATGGCCGCCTCCCACCAGCTCCAACCGTTCCAGGACCAC TCCTCCGCCATCACCACCGCCGCCAACGCCGCCGCGCAGTTCGACCACCTCATGGCCACG TCGTCCGCCGCGGCCGGCTCCCCTGCGTTCCGCGCCGCGCAGCCGACGTCGTCGTCCTCC TCGCCGTTCTACCTCGGCGGCGGCGGCGACGACGGACAGGCCCACACCTCGCTGCTCCAC GGCAAGCCGGCGTTCCACGGCCTAATGCAGCTGCCGGAGCAGCAGGGGAGCAATGGCGGC GGCCTCCTTAACCTGAGCTACTTCTCCGGCGGGAACGGCGGCCACCACCACCACCACCAG GAGGGACGACTCGTCTTCCCGGATCAGTTCAACGGCGTCGCCGCCGGGAACGGCGCCCGC GCCGGCAGCGGCGAGCACGGCAACAGCGGTAACAACGCCGACTCGGGGAGCATCTTCTCC GGGAACATGATGGGCGGCGGCGGCGGCTTCTCGTCCTTGTACAGCTCGTCCGACCAGACC GTCCCGCCGCCGCAGATGTCGGCGACGGCGCTTCTCCAGAAGGCCGCACAGATGGGCGCG ACGACGAGCAGCGGCGGCGCCGGCAGCGTGAACTCGCTACTCAGAGGTCTCGGAAGCGGC GGCGGCGGCGGCGCTCTGAACGGTAAGCCCGCCGGAGCAGCCGGGTTCATCATGTCCGGG GAGAGCTCGTCGAGGAGCACTGCTTCTCAGACGGCGGAGAACGAGAGCCAGCTCCGGGAG CTGATGATGAACACGCTCTCGGCGACCGGGGGCGGCACCGGCGCCGGAACGGTGTTCGTC GGCGGCGGCTTCCCCGGCGTGGACGACGGCAAGCTGAGCACGAGGGACTTCCTCGGCGTG AGCGGCGGCGCGCCGGGGCTTCAACTGCGGCACGGCGGCGCCGCCGGGATGGGCATGGCC GGCTCACTGGACCAAGAGATGAAGTAA

Peptide Sequence

PEP ID	Os08t0554400-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:27733390:27739327:-1 gene:Os08g0554400 transcript:Os08t0554400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 6 description:Zinc finger, C2H2-type domain containing protein. (Os08t0554400-01);Zinc finger, C2H2-type domain containing protein. (Os08t0554400-02)
Sequence	MAAASSAHYFGLGEPQMQQQQQQPPLQNNAAAPVAATPPPKKKRNQPGNPNPDAEVVALS PHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRVYLCPEPSCVH HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCNKRYAVQSDWKAHSKTCGTREYRCDCGTL FSRRDSFITHRAFCDALAQESGRIMPPMGAALYAAAGAGMAIGGLTGMAASHQLQPFQDH SSAITTAANAAAQFDHLMATSSAAAGSPAFRAAQPTSSSSSPFYLGGGGDDGQAHTSLLH GKPAFHGLMQLPEQQGSNGGGLLNLSYFSGGNGGHHHHHQEGRLVFPDQFNGVAAGNGAR AGSGEHGNSGNNADSGSIFSGNMMGGGGGFSSLYSSSDQTVPPPQMSATALLQKAAQMGA TTSSGGAGSVNSLLRGLGSGGGGGALNGKPAGAAGFIMSGESSSRSTASQTAENESQLRE LMMNTLSATGGGTGAGTVFVGGGFPGVDDGKLSTRDFLGVSGGAPGLQLRHGGAAGMGMA GSLDQEMK

Transcript Sequence

Transcript ID	Os08t0554400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27733390:27739327:-1 gene:Os08g0554400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:indeterminate domain 6 description:Zinc finger, C2H2-type domain containing protein. (Os08t0554400-01);Zinc finger, C2H2-type domain containing protein. (Os08t0554400-02)
Sequence	GTTTTCTCCTCTTCCTTTTTTCAACAAGGAGCCTAGCTTGTTTTCTTTAACTTGTTTGTT CGGTTCTCGATCTCCATCTCAGATCGATGACATGTGATTTATTTTTTTTGGTTTTTTCTC CTGCATGTGTTGCTGTTCTTCTTCTACCTCGGTCTCCATGCCTTATCTCATGTTATTGAC CAGTCTCCTTTTTTCAAGCTAGCTAGTTTCTAGCTGCCTTGCTTGTGAGTATGTGCAACG TACGATTGCATGTTTTTTTTTTTGGAACTTTGGATTAATTAGCTTGTGAATTAATTCCTC TCTTATTAATTCCTTGATTAAATTCCCCTCTCGTTTTCGTTTCCTTCCCCCTTTTTGATT TAATTTGTTGCTTTGTTATTAGAGAGGATCTGATCGATCAGCTGCAGGTCAGTCAGTTTG TCTGTCCTATGGCTGCACACAGTCGTGCAAATCGAAGAGGATTGGAAGTCAGCTGGTAGA CTAGCTAGCGTCCAAGATACACATACTACTATCGAAGAGTGTGACTTAATTGGATTGGAT TAATTCCATGCCTATCTTCTTCTTCAGCCACAATTTAACAGAACAAGACAATTAGTCTAT CAGTGGTTTGAGCTGATTAACTATCATCAGAGATAGAGATGGCAGCCGCCTCGTCTGCAC ACTACTTCGGTCTCGGCGAGCCGCAGATGCAGCAGCAGCAGCAGCAGCCTCCCCTGCAGA ACAACGCGGCTGCTCCGGTCGCGGCCACGCCGCCGCCCAAGAAGAAGAGGAATCAGCCCG GGAATCCAAATCCTGATGCGGAGGTGGTGGCGCTGTCGCCGCACACGCTGCTGGCGACGA ACAGGTTCGTGTGCGAGGTGTGCAACAAGGGGTTCCAGAGGGAGCAGAACCTGCAGCTGC ACCGGCGAGGGCACAACCTGCCATGGAAGCTGAAGCAGAAGAACCCCAAGGAGACGCGGC GGCGGGTGTACCTGTGCCCGGAGCCGTCCTGCGTCCACCACGACCCGTCGCGAGCCCTCG GCGACCTCACCGGCATCAAGAAGCACTACTCCCGCAAGCACGGCGAGAAGAAGTGGAAGT GCGACAAGTGCAACAAGCGCTACGCCGTCCAGTCCGACTGGAAGGCTCACTCCAAGACCT GCGGCACCCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCAGGAGGGACAGCTTCA TCACCCACCGCGCCTTCTGCGACGCGCTGGCGCAGGAGAGCGGCAGGATTATGCCACCCA TGGGCGCCGCCCTGTACGCCGCCGCCGGCGCCGGCATGGCCATCGGCGGCCTCACCGGCA TGGCCGCCTCCCACCAGCTCCAACCGTTCCAGGACCACTCCTCCGCCATCACCACCGCCG CCAACGCCGCCGCGCAGTTCGACCACCTCATGGCCACGTCGTCCGCCGCGGCCGGCTCCC CTGCGTTCCGCGCCGCGCAGCCGACGTCGTCGTCCTCCTCGCCGTTCTACCTCGGCGGCG GCGGCGACGACGGACAGGCCCACACCTCGCTGCTCCACGGCAAGCCGGCGTTCCACGGCC TAATGCAGCTGCCGGAGCAGCAGGGGAGCAATGGCGGCGGCCTCCTTAACCTGAGCTACT TCTCCGGCGGGAACGGCGGCCACCACCACCACCACCAGGAGGGACGACTCGTCTTCCCGG ATCAGTTCAACGGCGTCGCCGCCGGGAACGGCGCCCGCGCCGGCAGCGGCGAGCACGGCA ACAGCGGTAACAACGCCGACTCGGGGAGCATCTTCTCCGGGAACATGATGGGCGGCGGCG GCGGCTTCTCGTCCTTGTACAGCTCGTCCGACCAGACCGTCCCGCCGCCGCAGATGTCGG CGACGGCGCTTCTCCAGAAGGCCGCACAGATGGGCGCGACGACGAGCAGCGGCGGCGCCG GCAGCGTGAACTCGCTACTCAGAGGTCTCGGAAGCGGCGGCGGCGGCGGCGCTCTGAACG GTAAGCCCGCCGGAGCAGCCGGGTTCATCATGTCCGGGGAGAGCTCGTCGAGGAGCACTG CTTCTCAGACGGCGGAGAACGAGAGCCAGCTCCGGGAGCTGATGATGAACACGCTCTCGG CGACCGGGGGCGGCACCGGCGCCGGAACGGTGTTCGTCGGCGGCGGCTTCCCCGGCGTGG ACGACGGCAAGCTGAGCACGAGGGACTTCCTCGGCGTGAGCGGCGGCGCGCCGGGGCTTC AACTGCGGCACGGCGGCGCCGCCGGGATGGGCATGGCCGGCTCACTGGACCAAGAGATGA AGTAATTAATTAATTATTATATTAATTAACCACCAGATTATTAGGGTTCATCGATGCATC ATGCAAGCATGGAACTAGCTAATCAATCGATCGATCGATGAGATGATCAAGTTAATGGTG GATTAATGTGGTGTTTTGATTATTTAATTTAGGTGGATCAACTGGTGATAATGCATGTT