Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0554050-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27708166:27712609:1 gene:Os08g0554050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to auxin-independent growth promoter. (Os08t0554050-01)
Sequence	ATGGCCCAGCCTCGACGGCGCGGCGGCGGAGGCCACAACAAGTGCCCGCGCCCGGCCCTG CTGCCGGCGGCGGCGCTCCTGCTCTTCCTCCTCGCCGCCGTCGCGCTGCTCTACGTCTCC CCGCCGCCGCTCATCGATCACCCGGCCCTCGCTTCCTCTCGCCGCCGCTCCCCTCATGCC CCCCTGCTGAACAGCTCCGGCGGCGGAAGCACGGTGGTGTCCGAGCACAGCGAGATTTCG CGCGTTCCGATAAGCAAAGAGGCAGATGGCCTTTGGGGTTCTAAGTTTGCGAGCAGATTC TATGGGTGCAGCAACTCAAGCAGCAGGTTCCTTGGTTCAAGTGTTATCACGCAACCAGAC CGTTATTTGATGATCGTTACAAGTGGAGGCCTCAATCAACAGAGAACAGGGATAATTGAT GCTGTTGTTGCTGCACGTATCTTAAATGCCACACTTGTTGTTCCCAAATTGGATCAAACA TCTTTCTGGAAAGATGCAAGCAATTTCTCTGAAATTTTTGACGTCGACTGGTTCATCTCG AATCTATCAAAGGATGTAAAGATTGTGAAAGAGCTTCCAGAGATAGGAGGCAAACTGCGG ACTCCTCATAGAATGCGTGTGCCCCGAAAATGTACTCAGAGATGTTATGTGAACCGTGTG TTGCCTGCACTTCTTAAGAAACATGTTGTTCGGCTGACGAAATTTGATTATAGACTAGCA AACAGGTTGGACACAGATCTGCAGAAGCTGAGATGCAGAGTAAACTATCATGGGTTGAGA TTTACTGGCCTAATAGAAGAAATGGGTGAAAAATTAATACAAAGAATGAGAGAGAGAAGC AAACATTTTATTGCTCTTCATTTAAGATTTGAACCTGATATGCTTGCATTTTCGGGGTGC TATTATGGTGGTGGAGAAAAAGAAAGAAAAGAGCTTGGTGCAATACGGAAGAGATGGAAA ACCTTGCATGCTATCAACCCTGAGAAAGGAAGAAGGCAAGGTAGATGCCCATTGACTCCT GAAGAGGTGGGGCTGATGTTGAGGGCACTGGGCTACAGAAATGATGTTCACATTTATGTT GCATCTGGAGAGATATATGGCGGGGCAAGGACATTAGCACCCCTCAAAGCGTTCTTCCCA AATCTCCACACGAAAGAAACAATATCAAGCAAAGAGGAGCTGGCTCCATTCTCTAAATAC TCATCTCGCATGGCTGCACTTGATTTTATTGTATGTGATGGAAGTGATGCTTTTGTGACT AACAACAATGGTAACATGGCTAAAATTTTGGCTGGGCGAAGGAGATATTTTGGGCATAAG AGAACGATCCGGCCAAATGCTAAAAGGCTCTATTCCTTAATTTCGAACAGAAGAAACATG TCATGGGATTCATTCTCCTCAAGAGTGCGCATGGTTCAGAAAGGATTTATGGGAGAGCCC AAGGAACTCAGGCCAGGAAGGGGAGAATTTCATGAGAACCCTTCTACCTGTATATGTGAA AAAACCGTTAGCAAAACAGTAGCCAAATCTAACTCCCAATCTGAGCAAGTCTTAAGTAAT GATACTGAGAGAGGAATAGCCATTCAAACTGAGCAAGTCTCGAGTAATGATACTGAGATG GGAATAGCCACTAGTGAGCCCACAGTTCCTGATCATACTGATGAAGAGGCAGGTGAATCC GAGGCAGATGAAGATGCTCCTGGAGAGAAAGAGGAGATAATTGATCCTGAAGCGGATGAT GATGTGCAGTTCAGACTAGAGGATCCAGAGTTAGAAGGGATTCTTTCAGATTAG

Peptide Sequence

PEP ID	Os08t0554050-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27708166:27712609:1 gene:Os08g0554050 transcript:Os08t0554050-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to auxin-independent growth promoter. (Os08t0554050-01)
Sequence	MAQPRRRGGGGHNKCPRPALLPAAALLLFLLAAVALLYVSPPPLIDHPALASSRRRSPHA PLLNSSGGGSTVVSEHSEISRVPISKEADGLWGSKFASRFYGCSNSSSRFLGSSVITQPD RYLMIVTSGGLNQQRTGIIDAVVAARILNATLVVPKLDQTSFWKDASNFSEIFDVDWFIS NLSKDVKIVKELPEIGGKLRTPHRMRVPRKCTQRCYVNRVLPALLKKHVVRLTKFDYRLA NRLDTDLQKLRCRVNYHGLRFTGLIEEMGEKLIQRMRERSKHFIALHLRFEPDMLAFSGC YYGGGEKERKELGAIRKRWKTLHAINPEKGRRQGRCPLTPEEVGLMLRALGYRNDVHIYV ASGEIYGGARTLAPLKAFFPNLHTKETISSKEELAPFSKYSSRMAALDFIVCDGSDAFVT NNNGNMAKILAGRRRYFGHKRTIRPNAKRLYSLISNRRNMSWDSFSSRVRMVQKGFMGEP KELRPGRGEFHENPSTCICEKTVSKTVAKSNSQSEQVLSNDTERGIAIQTEQVSSNDTEM GIATSEPTVPDHTDEEAGESEADEDAPGEKEEIIDPEADDDVQFRLEDPELEGILSD

Transcript Sequence

Transcript ID	Os08t0554050-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27708166:27712609:1 gene:Os08g0554050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to auxin-independent growth promoter. (Os08t0554050-01)
Sequence	AAACCCACTCATCGAAATTCCACAAGTCTCCCATGTCGCCGCCGTCTCGGCGACCACCCC ACCACCACCGCCGCCGCTGCCGTCGCGGCACTACCTCCCTAGCCTAGCCTGAGATCTCCG GGCTCCGGAGGATGGCCCAGCCTCGACGGCGCGGCGGCGGAGGCCACAACAAGTGCCCGC GCCCGGCCCTGCTGCCGGCGGCGGCGCTCCTGCTCTTCCTCCTCGCCGCCGTCGCGCTGC TCTACGTCTCCCCGCCGCCGCTCATCGATCACCCGGCCCTCGCTTCCTCTCGCCGCCGCT CCCCTCATGCCCCCCTGCTGAACAGCTCCGGCGGCGGAAGCACGGTGGTGTCCGAGCACA GCGAGATTTCGCGCGTTCCGATAAGCAAAGAGGCAGATGGCCTTTGGGGTTCTAAGTTTG CGAGCAGATTCTATGGGTGCAGCAACTCAAGCAGCAGGTTCCTTGGTTCAAGTGTTATCA CGCAACCAGACCGTTATTTGATGATCGTTACAAGTGGAGGCCTCAATCAACAGAGAACAG GGATAATTGATGCTGTTGTTGCTGCACGTATCTTAAATGCCACACTTGTTGTTCCCAAAT TGGATCAAACATCTTTCTGGAAAGATGCAAGCAATTTCTCTGAAATTTTTGACGTCGACT GGTTCATCTCGAATCTATCAAAGGATGTAAAGATTGTGAAAGAGCTTCCAGAGATAGGAG GCAAACTGCGGACTCCTCATAGAATGCGTGTGCCCCGAAAATGTACTCAGAGATGTTATG TGAACCGTGTGTTGCCTGCACTTCTTAAGAAACATGTTGTTCGGCTGACGAAATTTGATT ATAGACTAGCAAACAGGTTGGACACAGATCTGCAGAAGCTGAGATGCAGAGTAAACTATC ATGGGTTGAGATTTACTGGCCTAATAGAAGAAATGGGTGAAAAATTAATACAAAGAATGA GAGAGAGAAGCAAACATTTTATTGCTCTTCATTTAAGATTTGAACCTGATATGCTTGCAT TTTCGGGGTGCTATTATGGTGGTGGAGAAAAAGAAAGAAAAGAGCTTGGTGCAATACGGA AGAGATGGAAAACCTTGCATGCTATCAACCCTGAGAAAGGAAGAAGGCAAGGTAGATGCC CATTGACTCCTGAAGAGGTGGGGCTGATGTTGAGGGCACTGGGCTACAGAAATGATGTTC ACATTTATGTTGCATCTGGAGAGATATATGGCGGGGCAAGGACATTAGCACCCCTCAAAG CGTTCTTCCCAAATCTCCACACGAAAGAAACAATATCAAGCAAAGAGGAGCTGGCTCCAT TCTCTAAATACTCATCTCGCATGGCTGCACTTGATTTTATTGTATGTGATGGAAGTGATG CTTTTGTGACTAACAACAATGGTAACATGGCTAAAATTTTGGCTGGGCGAAGGAGATATT TTGGGCATAAGAGAACGATCCGGCCAAATGCTAAAAGGCTCTATTCCTTAATTTCGAACA GAAGAAACATGTCATGGGATTCATTCTCCTCAAGAGTGCGCATGGTTCAGAAAGGATTTA TGGGAGAGCCCAAGGAACTCAGGCCAGGAAGGGGAGAATTTCATGAGAACCCTTCTACCT GTATATGTGAAAAAACCGTTAGCAAAACAGTAGCCAAATCTAACTCCCAATCTGAGCAAG TCTTAAGTAATGATACTGAGAGAGGAATAGCCATTCAAACTGAGCAAGTCTCGAGTAATG ATACTGAGATGGGAATAGCCACTAGTGAGCCCACAGTTCCTGATCATACTGATGAAGAGG CAGGTGAATCCGAGGCAGATGAAGATGCTCCTGGAGAGAAAGAGGAGATAATTGATCCTG AAGCGGATGATGATGTGCAGTTCAGACTAGAGGATCCAGAGTTAGAAGGGATTCTTTCAG ATTAGTTGAGTTGTCGATGCTTCACCAACCAATTTTTTTGGTGAGCAATTGAGGAATTTT GCCCCTCTAACGCCTAAACTGTACATAACTTGGTTTGCTCTGTCAATGTACATCTCTAGG CTAGTTCATAGTGACATTTTTCTGTAGTTCACTCACTCACAGTGTCACGCCGGCGGTTGA TCTCTTAGAAGCTTTGAGTTTGTAGTACTTGTGGTTTGCATTGATATAGCCTGTAGCATA TGCTCTTGTACCTGTTATTCAACTCCTTTTTGTGGTGTCTAAAATGGATGTTCTATTTTG ACC