Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0554000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27703403:27707229:1 gene:Os08g0554000 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD-40 repeat containing protein. (Os08t0554000-01);Similar to protein TSSC1. (Os08t0554000-02)
Sequence	ATGCAGGGCGGATCTAGCGGCATCGTCTACGGCGGCCTCAAGTACCAGGCGCGGTGCATC GCCGACGTGCGCGCGGCCGCCGGGTCGACCACCTTCCTCGCCGGAACCCTCAGTCTCAAG GAGGAGAACGAGGTGCACCTGATCCGGTTTTCACCGGCGGAGAGCGAGCTGGTGTGCGAC GGGCTGTTCTACCATCCAAACGAGATCTGGGACCTTAAGTCTTGCCCCTTCGATCATAGG GTCTTCTCCACAGTCTACACGTCTGGCGAGGGCTATGGTGCATCTGTTTGGAAGATCCCG GAGCTGCACGGGCAGTCGAATTCGCCGCCACTTGAGCAGCTTTTCACGCTTGATGAGCAC ACGGGCAAAATAAGATGTGTTCTCTGGTGGCCACTAGGGAAGCACGACAAGTTAATTAGT ATTGATGACAGAAATATTTTCCTCTGGAATATAGATGCATCAAATAAGTCAGCCAAGGTG ATGCAAAAGGGGTCTGCTGACATGCTTCCCAATTTACGTGGTGGATCTTGGGATCCACAC GATCACAATTCAATTGCTGCAATTACTGATTCCTCACTTCACTGCTGGGATCTCCGTTCT ATGAAGAAATCAAATGCAATTGAGCATGCGCATTTTCGGGATGTGGATTATAACCCCAAG AAACAGCACTTAATTACAACAGCAGAAGATGAATTTGGTATCCGTTTGTGGGATCTCAGA ATGCTTAAGTATCCTCTGAAGAATCTCCCTGGGCATTCGCATTGGACATGGGCTGTTCGG CACAATCCTGAGCATGACCAGTTGATTCTGAGTGCTGGAACAGATTCAACTGTCAATTTG TGGTTTGCTAAAGTTGGCACTGATGACTCAGGACCTGAAAGTCCTCCTGGTTCACCCACA AGAGAAGAAGAACCATTACTAAATTCATACACTGATTATGAAGATAGCATATACGGTATT GCATGGAGCTCCCATGATCCGTCATTATTTGCTTCTTTATCTTATGACGGAAGGGTTGTT TTAGAATCAGTCAAGCCCTACTTGCAGAGAAAATGA

Peptide Sequence

PEP ID	Os08t0554000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27703403:27707229:1 gene:Os08g0554000 transcript:Os08t0554000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD-40 repeat containing protein. (Os08t0554000-01);Similar to protein TSSC1. (Os08t0554000-02)
Sequence	MQGGSSGIVYGGLKYQARCIADVRAAAGSTTFLAGTLSLKEENEVHLIRFSPAESELVCD GLFYHPNEIWDLKSCPFDHRVFSTVYTSGEGYGASVWKIPELHGQSNSPPLEQLFTLDEH TGKIRCVLWWPLGKHDKLISIDDRNIFLWNIDASNKSAKVMQKGSADMLPNLRGGSWDPH DHNSIAAITDSSLHCWDLRSMKKSNAIEHAHFRDVDYNPKKQHLITTAEDEFGIRLWDLR MLKYPLKNLPGHSHWTWAVRHNPEHDQLILSAGTDSTVNLWFAKVGTDDSGPESPPGSPT REEEPLLNSYTDYEDSIYGIAWSSHDPSLFASLSYDGRVVLESVKPYLQRK

Transcript Sequence

Transcript ID	Os08t0554000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27703403:27707229:1 gene:Os08g0554000 gene_biotype:protein_coding transcript_biotype:protein_coding description:WD-40 repeat containing protein. (Os08t0554000-01);Similar to protein TSSC1. (Os08t0554000-02)
Sequence	AGTCTCGCTCGTCTCCGTGCATTCCGCGATCTCCGTGCCCGTCGACCACCGTGGTGCTCG CCGGCGACGGACGGAGCGAGAATGCAGGGCGGATCTAGCGGCATCGTCTACGGCGGCCTC AAGTACCAGGCGCGGTGCATCGCCGACGTGCGCGCGGCCGCCGGGTCGACCACCTTCCTC GCCGGAACCCTCAGTCTCAAGGAGGAGAACGAGGTGCACCTGATCCGGTTTTCACCGGCG GAGAGCGAGCTGGTGTGCGACGGGCTGTTCTACCATCCAAACGAGATCTGGGACCTTAAG TCTTGCCCCTTCGATCATAGGGTCTTCTCCACAGTCTACACGTCTGGCGAGGGCTATGGT GCATCTGTTTGGAAGATCCCGGAGCTGCACGGGCAGTCGAATTCGCCGCCACTTGAGCAG CTTTTCACGCTTGATGAGCACACGGGCAAAATAAGATGTGTTCTCTGGTGGCCACTAGGG AAGCACGACAAGTTAATTAGTATTGATGACAGAAATATTTTCCTCTGGAATATAGATGCA TCAAATAAGTCAGCCAAGGTGATGCAAAAGGGGTCTGCTGACATGCTTCCCAATTTACGT GGTGGATCTTGGGATCCACACGATCACAATTCAATTGCTGCAATTACTGATTCCTCACTT CACTGCTGGGATCTCCGTTCTATGAAGAAATCAAATGCAATTGAGCATGCGCATTTTCGG GATGTGGATTATAACCCCAAGAAACAGCACTTAATTACAACAGCAGAAGATGAATTTGGT ATCCGTTTGTGGGATCTCAGAATGCTTAAGTATCCTCTGAAGAATCTCCCTGGGCATTCG CATTGGACATGGGCTGTTCGGCACAATCCTGAGCATGACCAGTTGATTCTGAGTGCTGGA ACAGATTCAACTGTCAATTTGTGGTTTGCTAAAGTTGGCACTGATGACTCAGGACCTGAA AGTCCTCCTGGTTCACCCACAAGAGAAGAAGAACCATTACTAAATTCATACACTGATTAT GAAGATAGCATATACGGTATTGCATGGAGCTCCCATGATCCGTCATTATTTGCTTCTTTA TCTTATGACGGAAGGGTTGTTTTAGAATCAGTCAAGCCCTACTTGCAGAGAAAATGAAGC TGCATGTTCTCTCCGTTGTAAGGGCACATAACTCCACTTCTTTGCTCGGTATGTTGTTGA TGCGATTACCAATAGTACCTTCTCTTGTTCTAACAGACCTTCCCTTTTCTGCTCAAGCAG ACTTGTTTGTTGTGCATATTATTGGTGTTGTAGATTTTCTCCTTGCCATCCTATATACTG TACTCTGGTACATGGAGTTGATGCGATGGCCTGATTCGACAGCTTGTGACCCCAGAACAA TAGCAAGCCAATAATGTTTCAGTAACCATCTTGGCAGAAATCCAGTGTCTCATATGATCT GCCACTCTTGTGATTCAGGCCAGCTGTAATTGCAAAATTCAGCCTGGTACAATTGCCAAA TACTGCTCCTCGAGTGATTCTTGAATGTCATATATCTGAGAAAGGTTGGTGTCAATTGTT GCGTTATGTGGTGAAGTACAACCGATCTGAATTTTGTAGAACTGTTGAGATTGACAAGAT CTGAGCTTCTGTTTTTCATTCGATTTTTCACTGTATGAGTGGTTCCCTTACTTTAGCAAA GATTAATATTTCGTCTGTATGTTACAAAATCATTCAGGGAATGAGCAAATTAACTTCAAA TT