Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0553750-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27693974:27696402:1 gene:Os08g0553750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant domain containing protein. (Os08t0553750-00)
Sequence

ATGGCATTCCACCTCAGATCTGCGAGTGTGCCATCCAGCCCTTGCTCCAATGAAACCAAC
GCTGAAGAACTGCTGCAGAGTCTAAAGGTGACCATTTCCTCACCCAGTTCAACCATCGAG
ACGATGAGCAGTGGCTGGAAGAAGCTTGGGAGTATCTACAACTGCATCGATGAGATCATG
TGTCTGCCCAGCAGCCAAGCTCTCCTTTGCCAACCACTGCAGAGGAAAGCAGTGGAGCAA
GAGTTAGAAGGCTCTCTCGTCGTGCTAGACCTCTGCAACGCCATTCACGAGAGCTTTTCC
GGGCTCAAGGCATGCATCCAGGACATGCAGCTGGCTGTCAAGAGAGGAGATGATGCAGCT
GTCCAAGCCAAGATACAGTCTTACATCCGCCTCGCCAAGAAGGGGCGAAAACAGTTCAAG
CATATCAGCAAGAAGTCTTCTTCAGCAGATCAGGAGAGCTGCAGGGTGATCAAGCTGTTG
GCTGAAGCTAGAGAGATAGCTCTGTCAATGCTCGAGTCGTCATCACATCTCCTGTCGAAG
CAGATTGCTTTGCCATGCTCTAGCAAATGGTCTCTTGTCTCCAAGACATTCCAGAAAAGA
AGGCTTGTCTGCGAGGAGGAGCAATTGCAGTTGCAGGTGTTAGAGTGCTGCATCGGAGAT
CTTGAGGCTGGGGCTGGACTTGTGTTCAGGAGATTGGTCCAGAGCAGGGTTACTCTCCTT
AACATTCTTAGCTCATAG

Peptide Sequence

PEP ID

Os08t0553750-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27693974:27696402:1 gene:Os08g0553750 transcript:Os08t0553750-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant domain containing protein. (Os08t0553750-00)
Sequence

MAFHLRSASVPSSPCSNETNAEELLQSLKVTISSPSSTIETMSSGWKKLGSIYNCIDEIM
CLPSSQALLCQPLQRKAVEQELEGSLVVLDLCNAIHESFSGLKACIQDMQLAVKRGDDAA
VQAKIQSYIRLAKKGRKQFKHISKKSSSADQESCRVIKLLAEAREIALSMLESSSHLLSK
QIALPCSSKWSLVSKTFQKRRLVCEEEQLQLQVLECCIGDLEAGAGLVFRRLVQSRVTLL
NILSS

Transcript Sequence

Transcript ID

Os08t0553750-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27693974:27696402:1 gene:Os08g0553750 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant domain containing protein. (Os08t0553750-00)
Sequence

ATGGCATTCCACCTCAGATCTGCGAGTGTGCCATCCAGCCCTTGCTCCAATGAAACCAAC
GCTGAAGAACTGCTGCAGAGTCTAAAGGTGACCATTTCCTCACCCAGTTCAACCATCGAG
ACGATGAGCAGTGGCTGGAAGAAGCTTGGGAGTATCTACAACTGCATCGATGAGATCATG
TGTCTGCCCAGCAGCCAAGCTCTCCTTTGCCAACCACTGCAGAGGAAAGCAGTGGAGCAA
GAGTTAGAAGGCTCTCTCGTCGTGCTAGACCTCTGCAACGCCATTCACGAGAGCTTTTCC
GGGCTCAAGGCATGCATCCAGGACATGCAGCTGGCTGTCAAGAGAGGAGATGATGCAGCT
GTCCAAGCCAAGATACAGTCTTACATCCGCCTCGCCAAGAAGGGGCGAAAACAGTTCAAG
CATATCAGCAAGAAGTCTTCTTCAGCAGATCAGGAGAGCTGCAGGGTGATCAAGCTGTTG
GCTGAAGCTAGAGAGATAGCTCTGTCAATGCTCGAGTCGTCATCACATCTCCTGTCGAAG
CAGATTGCTTTGCCATGCTCTAGCAAATGGTCTCTTGTCTCCAAGACATTCCAGAAAAGA
AGGCTTGTCTGCGAGGAGGAGCAATTGCAGTTGCAGGTGTTAGAGTGCTGCATCGGAGAT
CTTGAGGCTGGGGCTGGACTTGTGTTCAGGAGATTGGTCCAGAGCAGGGTTACTCTCCTT
AACATTCTTAGCTCATAGATACTCCTCTGTCATTCTTGATAGCATGTGATCGGTATCCGC
CTTTTAAAGGATTTGCCGATCCTTCCCATTTGTATATGTAGTGTACAGAAATGTTCATAC
ATGAAGA