Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0553700-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27691880:27692897:1 gene:Os08g0553700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0553700-00)
Sequence

ATGGTATTCCACCTCAGATCCGCGAGCGTGCCTTCCAGCCCTTGCTCCAATGAAACCAAC
ATCGAAGAACAGCTGGCGAGCCTCAGGGAGATCATCTGTTCACCCTCTGCAACCATGGAA
ACAATGTGCAATGGTTTCAGGAGGCTTACAGATGTGTACAGCTGCATGGATGAGATCATG
TGCTTGCCCAGCAGCCAAGCTAGCCTTTGCAAGCATCAGCAGAGGAGAGAAGTGGAGAAA
GAGCTGGAGCGGTCTCTCACCTTGCTTGACCTCTGCAACGCCATGCAAGAGAGCTTCTCT
GAGCTCAAGGCAACCACCCAGGAGATGCAGTTGGCCATCAAGAGAGGAGAAGATGCAGCA
GTTCAGACCAATGTTCAGTCTTACACCCGCCTGACCAAGAAGGCACATAAACAGTGCAAG
AAGATCAACAAGAAGCCTGCTAGTTCAGCTGATCAGGAGAGCTGCAGGGTGGTCAAGCTG
ATGGCTGATGCCAGAGAGATCACTTTCTCAGTGCTTGAATCAACTTTGCATCTCCTGTCA
AAGCAGATTGCGGTGCCGAGTTCCAGCAAGTGGTCTCTTAAGGCATTCCAGAAGACAAGG
GTTACATGCCAGGAGGAGCAATTACAGGTGTTGGAGTTGGACATCGTTGATCTTCAGAGC
GGAGTTGAGACTTTGTTCAGGAGATTGATCCAGAGCAGAGTTTCTCTTTTGAATGCTCTT
AGCTTGTAG

Peptide Sequence

PEP ID

Os08t0553700-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27691880:27692897:1 gene:Os08g0553700 transcript:Os08t0553700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0553700-00)
Sequence

MVFHLRSASVPSSPCSNETNIEEQLASLREIICSPSATMETMCNGFRRLTDVYSCMDEIM
CLPSSQASLCKHQQRREVEKELERSLTLLDLCNAMQESFSELKATTQEMQLAIKRGEDAA
VQTNVQSYTRLTKKAHKQCKKINKKPASSADQESCRVVKLMADAREITFSVLESTLHLLS
KQIAVPSSSKWSLKAFQKTRVTCQEEQLQVLELDIVDLQSGVETLFRRLIQSRVSLLNAL
SL

Transcript Sequence

Transcript ID

Os08t0553700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27691880:27692897:1 gene:Os08g0553700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0553700-00)
Sequence

GATTCTTTCTGTCTGCTGGTCCAGTAATGAGACTGCTTCTCCCTCCTTCGTTATATATAG
AGAAGCCATGGTTTGCTGTTGACAACATTGCAAAGCAGTCTGTTCTCTTCCATTTCTAGA
GAGAAACGAGTCATCAGCTTCCATCCCAACCATGGTATTCCACCTCAGATCCGCGAGCGT
GCCTTCCAGCCCTTGCTCCAATGAAACCAACATCGAAGAACAGCTGGCGAGCCTCAGGGA
GATCATCTGTTCACCCTCTGCAACCATGGAAACAATGTGCAATGGTTTCAGGAGGCTTAC
AGATGTGTACAGCTGCATGGATGAGATCATGTGCTTGCCCAGCAGCCAAGCTAGCCTTTG
CAAGCATCAGCAGAGGAGAGAAGTGGAGAAAGAGCTGGAGCGGTCTCTCACCTTGCTTGA
CCTCTGCAACGCCATGCAAGAGAGCTTCTCTGAGCTCAAGGCAACCACCCAGGAGATGCA
GTTGGCCATCAAGAGAGGAGAAGATGCAGCAGTTCAGACCAATGTTCAGTCTTACACCCG
CCTGACCAAGAAGGCACATAAACAGTGCAAGAAGATCAACAAGAAGCCTGCTAGTTCAGC
TGATCAGGAGAGCTGCAGGGTGGTCAAGCTGATGGCTGATGCCAGAGAGATCACTTTCTC
AGTGCTTGAATCAACTTTGCATCTCCTGTCAAAGCAGATTGCGGTGCCGAGTTCCAGCAA
GTGGTCTCTTAAGGCATTCCAGAAGACAAGGGTTACATGCCAGGAGGAGCAATTACAGGT
GTTGGAGTTGGACATCGTTGATCTTCAGAGCGGAGTTGAGACTTTGTTCAGGAGATTGAT
CCAGAGCAGAGTTTCTCTTTTGAATGCTCTTAGCTTGTAGATAGATCATACACCAACTCT
AATCCCCTGTGATTGGCATCCGCCTTTTCGAGGATTTGCTGATCATTGAATCAATTTTGT
CATGTGTACATAAATGAGAGGAAATGTACAGAAATTTATGCGATTGAAAAACAAAGGA