Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0553300-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27684127:27685646:1 gene:Os08g0553300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0553300-00)
Sequence

ATGGCTTTCCACCAAAGATCAATTAGCTTGCCTTCTAGGCCTCTCTCCAAAGTTGAAGAT
GAGTTGCACAGCATAGAGGCATGCATCTCATCACCCTCCACGACCATCGAGGTGGTCTCT
GATGGTTTGAGGCGGCTTGGGGACATCTACAGCTCCATTGTGGAGATCATGTGCCTGCCT
AGCAACCAAATTTGCTCATCCCAACAGAGGAGGTTGTTGGATGGAGAAATGGAATGCTCC
CTTCAGCTACTGGATCTCTGCAACTCTATGAGTGAGGTCTTCACCGAGTTGAAGGTCATC
ATCCAAGATCTGCAAGTACATCTCAGAAAAGGAGATGGTGCAGTTGTTCAAGCCAAGATC
CAGTCATTCATCCGCTTGATGAAGAACGCGAAGAAGCATTCCAAGAAGACTGTGAAGAAG
GTTGTCTCAGACAACGACTGCAGGATAGTGAAGCTGATGAGCGAGGCTAGAGAGATCACT
ACCTCACTATTCGAGTCAATATTGTACCTCTTGTCAAAGCAAATTACAATGCCAAAATCA
TCTCTCATCCCCAAGGCATTCCAGAAGAAAAACCTGGTGATTTGCAATGAGGAGCAGTTG
CAGGCATTAGAGTGCTGCATCGGAGATCTTGAGGCTGGAGCAGGACTTCTGTTCAGGAGA
TTGATCCAGACCAGGGTTACTCTCCTCAACATTCTTAGCTCATAG

Peptide Sequence

PEP ID

Os08t0553300-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27684127:27685646:1 gene:Os08g0553300 transcript:Os08t0553300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0553300-00)
Sequence

MAFHQRSISLPSRPLSKVEDELHSIEACISSPSTTIEVVSDGLRRLGDIYSSIVEIMCLP
SNQICSSQQRRLLDGEMECSLQLLDLCNSMSEVFTELKVIIQDLQVHLRKGDGAVVQAKI
QSFIRLMKNAKKHSKKTVKKVVSDNDCRIVKLMSEAREITTSLFESILYLLSKQITMPKS
SLIPKAFQKKNLVICNEEQLQALECCIGDLEAGAGLLFRRLIQTRVTLLNILSS

Transcript Sequence

Transcript ID

Os08t0553300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27684127:27685646:1 gene:Os08g0553300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0553300-00)
Sequence

CAAGTGGGTCATGTCACTACGATGACATTTGTTGCCTCACTAGCAAGCAAAGGATCCATG
TAAAGTGGATCTTGCTGCTGCAGCTAAAACAAGCCAACTACAATACATGAGATTAAGCAA
CAATCAGTTGTTAACAAGAGCATAAAAAATAGATAACACATGTAATAACAATAACACTGT
TGTAGCAATCAATTAAAATAATCCCTTGAGAGCATGCAATTATGCCAAAAACCACAGGTA
GAGCTAACTAACCTGTTGGTTCTTGCTGCTGATAGTTGAGACATGACAATGTGATAACTC
TCTTGGAAGATAGATGCCAGTACATTAAAAATGAGAACAGAACACGAGAGATTCCATATG
CTGTTTATTGCTGCTGCCAGATCTCATACCATGATAGACAGCATCAGGGAGCTGAACTGG
AATGATTCTGTTTGTCTACCAACCAAATGGTGCTGTGTCTAGCACATCCCCTGAATAAAT
AGGCCTCAGCACAAAGCTAGACACATCATACCATCAGTTTCCTTTCCTTCTCATCTCTTG
GATTCAGCACAAAGAGGCAGAGCTAGCAACAGACATGGCTTTCCACCAAAGATCAATTAG
CTTGCCTTCTAGGCCTCTCTCCAAAGTTGAAGATGAGTTGCACAGCATAGAGGCATGCAT
CTCATCACCCTCCACGACCATCGAGGTGGTCTCTGATGGTTTGAGGCGGCTTGGGGACAT
CTACAGCTCCATTGTGGAGATCATGTGCCTGCCTAGCAACCAAATTTGCTCATCCCAACA
GAGGAGGTTGTTGGATGGAGAAATGGAATGCTCCCTTCAGCTACTGGATCTCTGCAACTC
TATGAGTGAGGTCTTCACCGAGTTGAAGGTCATCATCCAAGATCTGCAAGTACATCTCAG
AAAAGGAGATGGTGCAGTTGTTCAAGCCAAGATCCAGTCATTCATCCGCTTGATGAAGAA
CGCGAAGAAGCATTCCAAGAAGACTGTGAAGAAGGTTGTCTCAGACAACGACTGCAGGAT
AGTGAAGCTGATGAGCGAGGCTAGAGAGATCACTACCTCACTATTCGAGTCAATATTGTA
CCTCTTGTCAAAGCAAATTACAATGCCAAAATCATCTCTCATCCCCAAGGCATTCCAGAA
GAAAAACCTGGTGATTTGCAATGAGGAGCAGTTGCAGGCATTAGAGTGCTGCATCGGAGA
TCTTGAGGCTGGAGCAGGACTTCTGTTCAGGAGATTGATCCAGACCAGGGTTACTCTCCT
CAACATTCTTAGCTCATAGATACTCCTCAAGATCTGACACTCTTAAGACCCTGCGATTGG
CATCCGTCTTTTAAAGGATTTGCTGATCCTTCCCATTTGTATATGTTATAGGCTTACTGT
ACAGCAAAGAAAATACATGAAAAGAGACAAAGTTTTGATCCAATTC