Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0553200-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27682525:27683919:1 gene:Os08g0553200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0553200-00)
Sequence

ATGGCTTTCCACCAAAGATCAATTAGCTTGCCTTCAAGGCCTCTCTCCAAGGTTGAAGAT
GAGTTGCACAGCATAGAGGCATGTGTCTCATCACCCTCCAAGACCATCGAGATGATCTCT
GATGGTTTGAGGAGGCTTGGTGATATATATAGCTCCATTGAGGAGATCATGTGCCTACCT
AGCAACCAAGTTTGCTCATCACAGCAAAGGAAGTTGTTTGACAGAGAGATGGAATGCTCC
CTTGAGCTACTAGATCTCTGCAACGCTATGAACGAGGTCTTCACCGAGTTGAAGTCCATC
ATCCAAGATCTGCAAGTGTCTCTCAGAAAAGGAGATGATGCAGTTGTTCAAGCCAAGATC
CTGTCATACATCCGGCTGGTGAAGAAGGCAAAGAAGCATTCCAAGAAGACTGTGAAGAAG
GTTGCCTCAGACATGGAGGACTCCAAGAAGGTCAAGCTGTTGAGCAACGCTAGACAGATC
ACTACCTCTCTATTTGAATCAACACTGGACCTCTTGTCAAAGCAAATTGTGTTGCCAAAA
TTGTCTCTCATCTCCAAGGCGTTCCAGAAGAAGAACTCGGTGATCTGCAATGAGGAGCAG
TTGCAGGCATTAGAGTGCTGCATCGGAGATCTTGAGGCTGGAGCAGTACTTCTGTTCAGG
AGATTGGTCCAGAGCAGGGTTACTCTCCTCAACATTCTTAGCTCATAG

Peptide Sequence

PEP ID

Os08t0553200-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27682525:27683919:1 gene:Os08g0553200 transcript:Os08t0553200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0553200-00)
Sequence

MAFHQRSISLPSRPLSKVEDELHSIEACVSSPSKTIEMISDGLRRLGDIYSSIEEIMCLP
SNQVCSSQQRKLFDREMECSLELLDLCNAMNEVFTELKSIIQDLQVSLRKGDDAVVQAKI
LSYIRLVKKAKKHSKKTVKKVASDMEDSKKVKLLSNARQITTSLFESTLDLLSKQIVLPK
LSLISKAFQKKNSVICNEEQLQALECCIGDLEAGAVLLFRRLVQSRVTLLNILSS

Transcript Sequence

Transcript ID

Os08t0553200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27682525:27683919:1 gene:Os08g0553200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0553200-00)
Sequence

CAAAGGATCCGTGTGCAGTGGATCTTGCTGCCACAGCTAAAACAGTCCAGCTACCATACA
TGAGGTTGAGCGTGCAAGTACCACTGATTGCACAAAATAGAACACATGTTGAAATTAACA
AGAGCATAAAAAAAGATAAAACACATATAAAAAATACCACTCTGGAAGCAATCAATTAAA
ATAATGCCTTGAGTGCATGCAATTATGTAGAGTGAACTAACCTGCTGTTTCTTCCTGCCA
ACAGTTGAGACATGACAATGTGATAAGTCCTTGGAAGGTAGATGGCAGTATATTAAAGTA
TTGAACATACGAGAGATCCCATATGCTGTTTATTGCTGCTGCCAGACCTCCACCCATTGT
GGACAGCATCAGGAAGCTGAACTGGCAGGATTCTGTTTGTCTACCAACCAGATGATGCTT
TTTCTTGCACATCAACTGAATAAATAGGCCTCAGCACAAAGCTAGACTCATCAAACCATA
AGTTACATTTCCTCCTCATCTCTTGGTTTCAACACAAAGAGGCAGAGTTCTAGCAACAGA
CATGGCTTTCCACCAAAGATCAATTAGCTTGCCTTCAAGGCCTCTCTCCAAGGTTGAAGA
TGAGTTGCACAGCATAGAGGCATGTGTCTCATCACCCTCCAAGACCATCGAGATGATCTC
TGATGGTTTGAGGAGGCTTGGTGATATATATAGCTCCATTGAGGAGATCATGTGCCTACC
TAGCAACCAAGTTTGCTCATCACAGCAAAGGAAGTTGTTTGACAGAGAGATGGAATGCTC
CCTTGAGCTACTAGATCTCTGCAACGCTATGAACGAGGTCTTCACCGAGTTGAAGTCCAT
CATCCAAGATCTGCAAGTGTCTCTCAGAAAAGGAGATGATGCAGTTGTTCAAGCCAAGAT
CCTGTCATACATCCGGCTGGTGAAGAAGGCAAAGAAGCATTCCAAGAAGACTGTGAAGAA
GGTTGCCTCAGACATGGAGGACTCCAAGAAGGTCAAGCTGTTGAGCAACGCTAGACAGAT
CACTACCTCTCTATTTGAATCAACACTGGACCTCTTGTCAAAGCAAATTGTGTTGCCAAA
ATTGTCTCTCATCTCCAAGGCGTTCCAGAAGAAGAACTCGGTGATCTGCAATGAGGAGCA
GTTGCAGGCATTAGAGTGCTGCATCGGAGATCTTGAGGCTGGAGCAGTACTTCTGTTCAG
GAGATTGGTCCAGAGCAGGGTTACTCTCCTCAACATTCTTAGCTCATAGATGAGTCAAGA
TCTGACACTCTTAAGACCCTGCGATCGGCATCTGTCTTTTAAAGGATTTGCTGATCCTTC
CCATTTGTATATGTTATAGGCTCACTGTACAGAAAAGAAAACACACATGAAAGAGACAAA
ATTTTGATCTAATTC