Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0551900-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27651568:27652508:1 gene:Os08g0551900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0551900-00)
Sequence

ATGGCATTCCACCTGAGATCTGCAAGTGTGCCATCGAGCCCTCGCTCCAACGAAATCGAT
ATCGAAGGGCAGCTCCAGAACCTGAAGGCAATTGTTTCTTCATCGTCTTCGACCATTGAG
ACAATGAGTAATGGCTTGAAGAGGATCGGGAATATCTACAGCTGCATCAATGAGATCATG
TGCCTGCCAAGCAGCCATGTTGCAATTTGCCAGCCACTGCAGAGGAAAGCAGTGGAGCAA
GAGCTTGAGCGCTCTCTCATCTTGCTCGATTTCTGCAATGCCATGCAGGAGAGCTTTTCC
AACCTTAAGCAAAGCATTCAAGACATGCAGCTGATTATGAAGAGAGGAGATAATGCAGCT
GTGCAAGTGAAGATCCAGTCTTATATCTGCCTTATCAAGAAGGCACAAAAACAGTTCAGG
AAGATCAGCAAGAAGTCTTCTTCAGTTGATCTGGAAAGCTGCAGGGTGGTCAAGCTGTTG
GCTGAAGCAAGAGAGATAGCTATCTTAATGCTTGAAACCTCATTCCATCTTCTCTCAAGG
CAACTTGCGATGCCAAGTTCTAGCAAGTGGTCTCTTGTCTCCAAGACATTCAAGAAGAGA
GCACTTTTCTGCCAAGAGGAGCAATTGCAAGTGTTGGAGTCGAACATTGCTGATTTAGAC
ACTGGAGTCAAGAATCTGTTCAGGAAATCGATCCAGAGCAGAGTTTCTCTTCTCAACACT
CTCAGCTTGTAG

Peptide Sequence

PEP ID

Os08t0551900-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27651568:27652508:1 gene:Os08g0551900 transcript:Os08t0551900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0551900-00)
Sequence

MAFHLRSASVPSSPRSNEIDIEGQLQNLKAIVSSSSSTIETMSNGLKRIGNIYSCINEIM
CLPSSHVAICQPLQRKAVEQELERSLILLDFCNAMQESFSNLKQSIQDMQLIMKRGDNAA
VQVKIQSYICLIKKAQKQFRKISKKSSSVDLESCRVVKLLAEAREIAILMLETSFHLLSR
QLAMPSSSKWSLVSKTFKKRALFCQEEQLQVLESNIADLDTGVKNLFRKSIQSRVSLLNT
LSL

Transcript Sequence

Transcript ID

Os08t0551900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27651568:27652508:1 gene:Os08g0551900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0551900-00)
Sequence

ACCATTGTAGCATACCTTCTCCTCTTCCAACTTCAGAGAGAGGAGGAAAAAAAAAGTATT
ACAGCTTCCTCTGAAGACATGGCATTCCACCTGAGATCTGCAAGTGTGCCATCGAGCCCT
CGCTCCAACGAAATCGATATCGAAGGGCAGCTCCAGAACCTGAAGGCAATTGTTTCTTCA
TCGTCTTCGACCATTGAGACAATGAGTAATGGCTTGAAGAGGATCGGGAATATCTACAGC
TGCATCAATGAGATCATGTGCCTGCCAAGCAGCCATGTTGCAATTTGCCAGCCACTGCAG
AGGAAAGCAGTGGAGCAAGAGCTTGAGCGCTCTCTCATCTTGCTCGATTTCTGCAATGCC
ATGCAGGAGAGCTTTTCCAACCTTAAGCAAAGCATTCAAGACATGCAGCTGATTATGAAG
AGAGGAGATAATGCAGCTGTGCAAGTGAAGATCCAGTCTTATATCTGCCTTATCAAGAAG
GCACAAAAACAGTTCAGGAAGATCAGCAAGAAGTCTTCTTCAGTTGATCTGGAAAGCTGC
AGGGTGGTCAAGCTGTTGGCTGAAGCAAGAGAGATAGCTATCTTAATGCTTGAAACCTCA
TTCCATCTTCTCTCAAGGCAACTTGCGATGCCAAGTTCTAGCAAGTGGTCTCTTGTCTCC
AAGACATTCAAGAAGAGAGCACTTTTCTGCCAAGAGGAGCAATTGCAAGTGTTGGAGTCG
AACATTGCTGATTTAGACACTGGAGTCAAGAATCTGTTCAGGAAATCGATCCAGAGCAGA
GTTTCTCTTCTCAACACTCTCAGCTTGTAGATAGATCATATACCACTTTGATCCCCTGTG
ACTGGTGTCCAAATTTTAAAGGATCTGCTGGTCACTGCAACATTTTAGCAATGTGTATAT
ACATTAGAGGAATTGTACAGATATTAAGTTGAGAAACAAAG