Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0551500-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27646938:27647642:1 gene:Os08g0551500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0551500-00)
Sequence

ATGGCTTGCCACCTAAGATCAGTCAGTTTGCCATCCAAGAGGCAATCCAATGAAGCTGAA
ATCGAGGATGAGCTGCAAAGCCTAGAGGCAAGCATCTCTTCACCCTCCACGACCATTGAT
GGTCTGAGGAGGCTTGGAGATGTCTACAATCAGATCGAGGAGATGATCCACTTGCCCAGC
AACCAAGTTTTCTCTGCACAGCAAAGGAAAATGTTGGATGGGGAAATGGAGTGCTCCCTC
GAGCTGATCGATCTCTGCAGTGCCATGCAAGAGAACTTCACCGAGTTGAAGACCATCATC
CAAGATCTGCACGCGGCTCTCAGAAGAGGAGACAGTGCAAGCATTCAGGTCAAGATCCAA
TCTTTCACCCGCTTGGCCAAGAAGGCGCAGAAGCAATGCAAGAAGATGAGCAAGAAGACT
ACTTCTGACAAGGAGGACTGCAAGCTGATCAAGCTATTGATCAAGGCTAGAGTGCTCACC
GTCTCTCTACTCGAGTCGACATCGTGCCACCTATCACAGCAACTAGTGGTTCCCAAGATG
TTTCTTGTCTCTAAGGCATTCCAAAAGAAGAGATCAGTTGTTTGTGAGGAGGAGCAATTG
CAGGCATTAGAGTGCATCATTGGAGATCTTGAGAATGGAGCCGAACTTCTGTTCAGGAGA
ATGATCCAGAGCAGAGTAGCGCTCCTAAACACTCTTAGCTCATAG

Peptide Sequence

PEP ID

Os08t0551500-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27646938:27647642:1 gene:Os08g0551500 transcript:Os08t0551500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0551500-00)
Sequence

MACHLRSVSLPSKRQSNEAEIEDELQSLEASISSPSTTIDGLRRLGDVYNQIEEMIHLPS
NQVFSAQQRKMLDGEMECSLELIDLCSAMQENFTELKTIIQDLHAALRRGDSASIQVKIQ
SFTRLAKKAQKQCKKMSKKTTSDKEDCKLIKLLIKARVLTVSLLESTSCHLSQQLVVPKM
FLVSKAFQKKRSVVCEEEQLQALECIIGDLENGAELLFRRMIQSRVALLNTLSS

Transcript Sequence

Transcript ID

Os08t0551500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27646938:27647642:1 gene:Os08g0551500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0551500-00)
Sequence

ATGGCTTGCCACCTAAGATCAGTCAGTTTGCCATCCAAGAGGCAATCCAATGAAGCTGAA
ATCGAGGATGAGCTGCAAAGCCTAGAGGCAAGCATCTCTTCACCCTCCACGACCATTGAT
GGTCTGAGGAGGCTTGGAGATGTCTACAATCAGATCGAGGAGATGATCCACTTGCCCAGC
AACCAAGTTTTCTCTGCACAGCAAAGGAAAATGTTGGATGGGGAAATGGAGTGCTCCCTC
GAGCTGATCGATCTCTGCAGTGCCATGCAAGAGAACTTCACCGAGTTGAAGACCATCATC
CAAGATCTGCACGCGGCTCTCAGAAGAGGAGACAGTGCAAGCATTCAGGTCAAGATCCAA
TCTTTCACCCGCTTGGCCAAGAAGGCGCAGAAGCAATGCAAGAAGATGAGCAAGAAGACT
ACTTCTGACAAGGAGGACTGCAAGCTGATCAAGCTATTGATCAAGGCTAGAGTGCTCACC
GTCTCTCTACTCGAGTCGACATCGTGCCACCTATCACAGCAACTAGTGGTTCCCAAGATG
TTTCTTGTCTCTAAGGCATTCCAAAAGAAGAGATCAGTTGTTTGTGAGGAGGAGCAATTG
CAGGCATTAGAGTGCATCATTGGAGATCTTGAGAATGGAGCCGAACTTCTGTTCAGGAGA
ATGATCCAGAGCAGAGTAGCGCTCCTAAACACTCTTAGCTCATAG