Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0551366-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27645208:27645921:1 gene:Os08g0551366 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant domain containing protein. (Os08t0551366-00)
Sequence

ATGGCTTGCCATCAAAGGTCTGCAAGCGTGCCTTCCAGCCCTTGCTCAAATGATACCACA
ATTGAGCAGCAGCTCCAGACCCTAAACACAGTCGTCTCTTCACCATCAGCAACCATCGAC
ACGATGTGCGATGGTTTGAGGAAGCTTGGAGATATCTACAACTCCATTGAGGAGCTGATT
TGCACACCTAGTAACCAAGTTAGCCTTTGCCAGAAGCTGCAAAGGAAGTTGGTGGAGGAA
GAGCTTGGACGGTCACTCGTCTTGCTTGACCTCTGCAATGCCATGCAAGAAAGCTTCATG
GAGTTGAGGATGAGTGTACAAGAGATGATGTTGGCCATCAAAAGGGGAGAAGATGCGTCT
GCTCAAGTCAAGGCATACATCCGGCTAGCCAAGAAGGCGCGGAAGCAATTCAAGAAGGTC
AGCAAAAAGACTGCTTCTGATAAGATGGACTGTAGGGTGGTAAAGCTACTAGCAGAAGCA
AGAGAAATCACCGTCTCATTGCTTGAGTCTACATCCTGTTTCCTGTCGAAGAAAATTGAG
ACGCCTAAGTGGTCTCTTGTCTCCGCCACATTCCAGAAGAGCAAAGTCATGTGCGAAGAG
GAGCAATTGCAGGAATTGGAGCTCACTATCAAAGACCTTGAGAGTGGAGCAGAACTTCTG
TTCAGGAGATTGATCCAGGGCAGAGTTTCTCTTCTGAATACTCTTAGCTCATAG

Peptide Sequence

PEP ID

Os08t0551366-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27645208:27645921:1 gene:Os08g0551366 transcript:Os08t0551366-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant domain containing protein. (Os08t0551366-00)
Sequence

MACHQRSASVPSSPCSNDTTIEQQLQTLNTVVSSPSATIDTMCDGLRKLGDIYNSIEELI
CTPSNQVSLCQKLQRKLVEEELGRSLVLLDLCNAMQESFMELRMSVQEMMLAIKRGEDAS
AQVKAYIRLAKKARKQFKKVSKKTASDKMDCRVVKLLAEAREITVSLLESTSCFLSKKIE
TPKWSLVSATFQKSKVMCEEEQLQELELTIKDLESGAELLFRRLIQGRVSLLNTLSS

Transcript Sequence

Transcript ID

Os08t0551366-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27645208:27645921:1 gene:Os08g0551366 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant domain containing protein. (Os08t0551366-00)
Sequence

ATGGCTTGCCATCAAAGGTCTGCAAGCGTGCCTTCCAGCCCTTGCTCAAATGATACCACA
ATTGAGCAGCAGCTCCAGACCCTAAACACAGTCGTCTCTTCACCATCAGCAACCATCGAC
ACGATGTGCGATGGTTTGAGGAAGCTTGGAGATATCTACAACTCCATTGAGGAGCTGATT
TGCACACCTAGTAACCAAGTTAGCCTTTGCCAGAAGCTGCAAAGGAAGTTGGTGGAGGAA
GAGCTTGGACGGTCACTCGTCTTGCTTGACCTCTGCAATGCCATGCAAGAAAGCTTCATG
GAGTTGAGGATGAGTGTACAAGAGATGATGTTGGCCATCAAAAGGGGAGAAGATGCGTCT
GCTCAAGTCAAGGCATACATCCGGCTAGCCAAGAAGGCGCGGAAGCAATTCAAGAAGGTC
AGCAAAAAGACTGCTTCTGATAAGATGGACTGTAGGGTGGTAAAGCTACTAGCAGAAGCA
AGAGAAATCACCGTCTCATTGCTTGAGTCTACATCCTGTTTCCTGTCGAAGAAAATTGAG
ACGCCTAAGTGGTCTCTTGTCTCCGCCACATTCCAGAAGAGCAAAGTCATGTGCGAAGAG
GAGCAATTGCAGGAATTGGAGCTCACTATCAAAGACCTTGAGAGTGGAGCAGAACTTCTG
TTCAGGAGATTGATCCAGGGCAGAGTTTCTCTTCTGAATACTCTTAGCTCATAG