Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0551300-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27643356:27644156:1 gene:Os08g0551300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0551300-00)
Sequence

ATGGCTGGCCATCAAAGATCGACAAGCCTGCCGTCTATGCCTCACCCCAACTACATCAAG
ATCGAAGAAGAGCTGCGCAACATATGCTCAGGCATCTCATCGCCATCCGCCACCATCGAA
ATGGTGTCTGACGCTCTGAGGAGGCTTGGTGGCGTCTACAACTGCATCAACGAGATCATA
AGCTTGCATAGCAACCAAGCACATGGCAAGAAGCTGGAGGAAGAGATGGAGCGGTCTCTG
GAGGTGCTGGATCTTTGCAGCGCCATGCAAGAGATGTTCGCTGACCTGAAGATGACCATC
CAAGAGCTGCAGATGGTTCTCAACAGGGGAGACCATGCAGTTGTTCAAGTGAAGGCTCAG
TCATACATCCGCCTGGTGAAGAAGGCTAAGCATCACCTGAAGAAGGCCAGCAACAAGTCT
ACCTCTGATGAGGATGGAAGGCTTGTCAGTCTGTTGACAACAGCGAGAGGGATCACTGCC
TCGGTCCTGAAATCTGCCCTAGAGCTCCTGTCGAAGCAAATCTCCACCTGCAATCCAAGC
AAGTGGTCTCTTATCTCCAAATCGTTCCAGAAGGCCAAAGTTTCATGCGAGGAGGTGCAA
TTGCAGGCATTAGAGTTGGGCATCGTTGGCCTAGAGAGCGGAGCTGAGAATCTGTTCAGG
AGATTGATCCAAACCAGGGCTTCCCTTCTGAACACTCTTAGCTCATAG

Peptide Sequence

PEP ID

Os08t0551300-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27643356:27644156:1 gene:Os08g0551300 transcript:Os08t0551300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0551300-00)
Sequence

MAGHQRSTSLPSMPHPNYIKIEEELRNICSGISSPSATIEMVSDALRRLGGVYNCINEII
SLHSNQAHGKKLEEEMERSLEVLDLCSAMQEMFADLKMTIQELQMVLNRGDHAVVQVKAQ
SYIRLVKKAKHHLKKASNKSTSDEDGRLVSLLTTARGITASVLKSALELLSKQISTCNPS
KWSLISKSFQKAKVSCEEVQLQALELGIVGLESGAENLFRRLIQTRASLLNTLSS

Transcript Sequence

Transcript ID

Os08t0551300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27643356:27644156:1 gene:Os08g0551300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF241, plant family protein. (Os08t0551300-00)
Sequence

TTTCATTCCAAACATGGCTGGCCATCAAAGATCGACAAGCCTGCCGTCTATGCCTCACCC
CAACTACATCAAGATCGAAGAAGAGCTGCGCAACATATGCTCAGGCATCTCATCGCCATC
CGCCACCATCGAAATGGTGTCTGACGCTCTGAGGAGGCTTGGTGGCGTCTACAACTGCAT
CAACGAGATCATAAGCTTGCATAGCAACCAAGCACATGGCAAGAAGCTGGAGGAAGAGAT
GGAGCGGTCTCTGGAGGTGCTGGATCTTTGCAGCGCCATGCAAGAGATGTTCGCTGACCT
GAAGATGACCATCCAAGAGCTGCAGATGGTTCTCAACAGGGGAGACCATGCAGTTGTTCA
AGTGAAGGCTCAGTCATACATCCGCCTGGTGAAGAAGGCTAAGCATCACCTGAAGAAGGC
CAGCAACAAGTCTACCTCTGATGAGGATGGAAGGCTTGTCAGTCTGTTGACAACAGCGAG
AGGGATCACTGCCTCGGTCCTGAAATCTGCCCTAGAGCTCCTGTCGAAGCAAATCTCCAC
CTGCAATCCAAGCAAGTGGTCTCTTATCTCCAAATCGTTCCAGAAGGCCAAAGTTTCATG
CGAGGAGGTGCAATTGCAGGCATTAGAGTTGGGCATCGTTGGCCTAGAGAGCGGAGCTGA
GAATCTGTTCAGGAGATTGATCCAAACCAGGGCTTCCCTTCTGAACACTCTTAGCTCATA
GATGCTCCATTGGCATTGGCATCCAACTTTTATAGGACCTGTCAATCACCACAAATTTTG
AATAATATGTACGTAAGTCTA