Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0550400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27602301:27603934:-1 gene:Os08g0550400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL5P. (Os08t0550400-01)
Sequence	ATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCCTACTCCCCTCCGGTGGTCGCCGGC GGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGGAGCATGTCCCGCCTGCCGGCTCGC GTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTCGTCTTCGCCACAGTGGGCACGATC CTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCGACGGAGAGCGGCATGGTGCGGGGC ACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCCATGGAGGTCGTCGACTCCTCCGTC GCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGCGTTCTCTACGTCCTTGACGTGATC TGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAGAACGCG GTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCG GAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGCCACGGGCATGCCGGCGGAC GCCATCGCCGCGCTCCCGGTCACCACGTTCGCCGCCGCCGCCGGCGGCGACGACCGCGCC GGCTGCTCCGTGTGCCTCCAGGACTTGGAGGACGGCGAGCGGGCGCGGAGGCTGCCGGAG TGCGGCCACACGTTCCACCTCCGCTGCATCGACAGCTGGCTGCTCAGGCACGCGTCGTGC CCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACGTCGTCGTCGGC TGA

Peptide Sequence

PEP ID	Os08t0550400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27602301:27603934:-1 gene:Os08g0550400 transcript:Os08t0550400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL5P. (Os08t0550400-01)
Sequence	MEAVAVHASFSSYSPPVVAGGRDDAGSSSSSRSMSRLPARVAGAVARGIVTFVFATVGTI LGAITGGLIGLATESGMVRGTGIGAISGAVVAMEVVDSSVAMWCSHDSGIWSVLYVLDVI WSLLTGRLVREKVDPAVQNAVDSQMNAADAPFRESAPTLAEMFDTGIPGVAAAATGMPAD AIAALPVTTFAAAAGGDDRAGCSVCLQDLEDGERARRLPECGHTFHLRCIDSWLLRHASC PLCRRTVVAAAVAVDDVVVG

Transcript Sequence

Transcript ID	Os08t0550400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27602301:27603934:-1 gene:Os08g0550400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL5P. (Os08t0550400-01)
Sequence	ATATGCTAACAAGATTTTTTTTAGAGACGTACCCAACATCCACAAAGCTAGCTAGCTAGA TCCTCCTCTTCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCC CTTATCCAAATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGC TTCTCGTCCTACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGC AGCAGCAGGAGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATC GTCACCTTCGTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATC GGGCTGGCGACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCG GTGGTCGCCATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGG ATCTGGAGCGTTCTCTACGTCCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTG CGGGAGAAGGTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGAC GCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGC GTCGCCGCCGCCGCCACGGGCATGCCGGCGGACGCCATCGCCGCGCTCCCGGTCACCACG TTCGCCGCCGCCGCCGGCGGCGACGACCGCGCCGGCTGCTCCGTGTGCCTCCAGGACTTG GAGGACGGCGAGCGGGCGCGGAGGCTGCCGGAGTGCGGCCACACGTTCCACCTCCGCTGC ATCGACAGCTGGCTGCTCAGGCACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCC GCCGCCGTCGCCGTCGACGACGTCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTT GGCTCGTTCGTGGTTAATTAGGCTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCA CGGCACGCCGCCGGCGACGGCGTGAGGATCACGACTGACGTGCGTGTGTGTACCTACTAC CTCACCTTCTTTTGATACCTTGATTCGTTTTGGCGTAGTACATATGTGTAGCGGATACTT GCATTATACTAGTATATACACACACACTTGTATGTATTGTAGATTTATATACTTGTACAT GGAGACCTTGTGATTAACATAATAGAGAGATCCAGATTTTGTCTCT