Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0550100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27588536:27592035:-1 gene:Os08g0550100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 3 description:Similar to 26S proteasome subunit RPN3a. (Os08t0550100-01);Non-protein coding transcript. (Os08t0550100-02)
Sequence	ATGACGGACGTGCAGATGAGCGACTCCGAGCCGCAGGCGGCGCCTCCCGCGGCGCCGGCG GCCTCCGCCCTCCACCATCTGAAGGAGATCGCCTCGGTGATCGAGGCCGGCTCGCTGTCC AAGGAGGTGCGCCGGATCTCCCGCGCCGTCCGCCTCACCGTCGCCCTCCGCCGCCGCCTC GCCGCCCGCGACGTCTCCGCCTTCCTCGCCTTCGCGCTCCCGCCTTCCTCCGAGGCCTAC ACCCGCCTCACCTCCCTCGTCCCCAAGGAAGATGACACTGAGATGGACATTGACATGGCA GCTCCAGCAACTCAGATTTCGATCAAGCATGGCCTCCCTGAGATTGAAATATATTGCTAT TTGCTTGTCCTGATTTTTCTTATTGACCAGAAGAAATACGACGATGCTAAAGCATGTGCA AATGCAAGCATTGCTCGTCTGAAAAACTTGAACAGGAGAACTGTTGATGTTCTGGCATCT AGACTGTACTTCTATTACTCATATGTGCATGAACTCACCAACAGCCTTGCTGAAATCCGT GGGAATCTGCTAGCCTTACACAGAATGGCAACTCTTCACCGCGATGAACTTGGCCAGGAA ACTTTGCTCAACCTGCTTCTTCGCAATTACCTCCATTATAATTTGTATGATCAAGCAGAG AAACTTAGGTCAAAAGCTCCTCGTTTTGAAGCCCACTCCAATCAACAATTCTGTCGATAC CTGTTCTACTTGGGTAAAATCAGGACAATTCAGTTGGAGTACACTGATGCTAAGGAAAGC CTTCTGCAAGCTGCTCGGAAGGCACCCATTACAGCTCGTGGCTTTCGTATTCAGTGCAAC AAATGGGCTATTATAGTGAGACTACTTCTCGGAGAGATTCCAGAGAGGACTGTGTTCATG CAGAAGGGAATGAAGGAAGCACTGACACCCTACTTCGAGCTTACAAATGCTGTCAGGATC GGTGATCTTGAATTGTTTAGGGCTGTCGCCGACAAATTTGTGAGCACTTTTAGTGCTGAC AGGACTCGCAATTTGATTGTGAGATTGCGCCACAATGTTATTCGAACCGGACTGCGCAAT ATTAGCATTTCATACTCACGGATCTCCCTTGCTGATATTGCCAAGAAGCTAAGGCTCGAC TCTGATAATCCTGTTGCTGATGCGGAGAGCATTGTAGCCAAGGCAATAAGGGATGGCGCA ATTGATGCCACCATAGATCATGCCAACGGCTGGATGGTGTCGAAAGAAACTGGCGATGTC TACTCGACAAATGAACCACAGATTGCATTCAACTCTCGGATTGCATTTTGCCTCAACATG CACAATGAAGCTGTGAAAGCAATGCGGTTCCCCCCGAACTCTCACAAGGAAAAGGAAAGT GCGGAGAAGCGCCGTGAGAGGCTCCAACAGGAGGAGGAGCTGGCAAAACACATGGCTGAG GAAGATGACGATGATTTTTAG

Peptide Sequence

PEP ID	Os08t0550100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27588536:27592035:-1 gene:Os08g0550100 transcript:Os08t0550100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 3 description:Similar to 26S proteasome subunit RPN3a. (Os08t0550100-01);Non-protein coding transcript. (Os08t0550100-02)
Sequence	MTDVQMSDSEPQAAPPAAPAASALHHLKEIASVIEAGSLSKEVRRISRAVRLTVALRRRL AARDVSAFLAFALPPSSEAYTRLTSLVPKEDDTEMDIDMAAPATQISIKHGLPEIEIYCY LLVLIFLIDQKKYDDAKACANASIARLKNLNRRTVDVLASRLYFYYSYVHELTNSLAEIR GNLLALHRMATLHRDELGQETLLNLLLRNYLHYNLYDQAEKLRSKAPRFEAHSNQQFCRY LFYLGKIRTIQLEYTDAKESLLQAARKAPITARGFRIQCNKWAIIVRLLLGEIPERTVFM QKGMKEALTPYFELTNAVRIGDLELFRAVADKFVSTFSADRTRNLIVRLRHNVIRTGLRN ISISYSRISLADIAKKLRLDSDNPVADAESIVAKAIRDGAIDATIDHANGWMVSKETGDV YSTNEPQIAFNSRIAFCLNMHNEAVKAMRFPPNSHKEKESAEKRRERLQQEEELAKHMAE EDDDDF

Transcript Sequence

Transcript ID	Os08t0550100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27588536:27592035:-1 gene:Os08g0550100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:19S REGULATORY PARTICLE NON-ATPASE SUBUNIT 3 description:Similar to 26S proteasome subunit RPN3a. (Os08t0550100-01);Non-protein coding transcript. (Os08t0550100-02)
Sequence	AAGGGAAGGGGAGCGACCTTCTTGAGGCAGAAGTCACGAACCAACCAGCGCCGCCGCCGC GATGACGGACGTGCAGATGAGCGACTCCGAGCCGCAGGCGGCGCCTCCCGCGGCGCCGGC GGCCTCCGCCCTCCACCATCTGAAGGAGATCGCCTCGGTGATCGAGGCCGGCTCGCTGTC CAAGGAGGTGCGCCGGATCTCCCGCGCCGTCCGCCTCACCGTCGCCCTCCGCCGCCGCCT CGCCGCCCGCGACGTCTCCGCCTTCCTCGCCTTCGCGCTCCCGCCTTCCTCCGAGGCCTA CACCCGCCTCACCTCCCTCGTCCCCAAGGAAGATGACACTGAGATGGACATTGACATGGC AGCTCCAGCAACTCAGATTTCGATCAAGCATGGCCTCCCTGAGATTGAAATATATTGCTA TTTGCTTGTCCTGATTTTTCTTATTGACCAGAAGAAATACGACGATGCTAAAGCATGTGC AAATGCAAGCATTGCTCGTCTGAAAAACTTGAACAGGAGAACTGTTGATGTTCTGGCATC TAGACTGTACTTCTATTACTCATATGTGCATGAACTCACCAACAGCCTTGCTGAAATCCG TGGGAATCTGCTAGCCTTACACAGAATGGCAACTCTTCACCGCGATGAACTTGGCCAGGA AACTTTGCTCAACCTGCTTCTTCGCAATTACCTCCATTATAATTTGTATGATCAAGCAGA GAAACTTAGGTCAAAAGCTCCTCGTTTTGAAGCCCACTCCAATCAACAATTCTGTCGATA CCTGTTCTACTTGGGTAAAATCAGGACAATTCAGTTGGAGTACACTGATGCTAAGGAAAG CCTTCTGCAAGCTGCTCGGAAGGCACCCATTACAGCTCGTGGCTTTCGTATTCAGTGCAA CAAATGGGCTATTATAGTGAGACTACTTCTCGGAGAGATTCCAGAGAGGACTGTGTTCAT GCAGAAGGGAATGAAGGAAGCACTGACACCCTACTTCGAGCTTACAAATGCTGTCAGGAT CGGTGATCTTGAATTGTTTAGGGCTGTCGCCGACAAATTTGTGAGCACTTTTAGTGCTGA CAGGACTCGCAATTTGATTGTGAGATTGCGCCACAATGTTATTCGAACCGGACTGCGCAA TATTAGCATTTCATACTCACGGATCTCCCTTGCTGATATTGCCAAGAAGCTAAGGCTCGA CTCTGATAATCCTGTTGCTGATGCGGAGAGCATTGTAGCCAAGGCAATAAGGGATGGCGC AATTGATGCCACCATAGATCATGCCAACGGCTGGATGGTGTCGAAAGAAACTGGCGATGT CTACTCGACAAATGAACCACAGATTGCATTCAACTCTCGGATTGCATTTTGCCTCAACAT GCACAATGAAGCTGTGAAAGCAATGCGGTTCCCCCCGAACTCTCACAAGGAAAAGGAAAG TGCGGAGAAGCGCCGTGAGAGGCTCCAACAGGAGGAGGAGCTGGCAAAACACATGGCTGA GGAAGATGACGATGATTTTTAGACTGGCTGGCCACTTCTTTGGCACTTTGGGCTGCCAAA TTGCAATGTTGAGTTGGTTGATCTGAGAGACCGTAACACACCTATACATGCCACTCACAA ATGATATTTGAGTCATGCAAAAACCCTTTGCTTCATCTGCCGGAAATTTATGTCGATGAG AAATTTATGACTCC