Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0549200-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:27561766:27565153:1 gene:Os08g0549200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 10 description:Glycoside hydrolase, family 35 protein. (Os08t0549200-01);Similar to Beta-galactosidase. (Os08t0549200-02)
Sequence	GAGTACCAGCACCTGGAGGTGGCATTCAAAGAGGCTGGCACCAAGTACATCAACTGGGCA GCTAAGATGGCCATCGCAACCAACACTGGTGTCCCGTGGATCATGTGCAAGCAGACTAAA GCTCCTGGTGAAGTGATCCCTACCTGCAATGGGAGGCACTGTGGAGATACTTGGCCGGGT CCAGCTGACAAGAAGAAGCCCCTCTTGTGGACTGAAAACTGGACTGCTCAGTACAGAGTT TTCGGTGATCCACCGTCCCAACGTTCTGCGGAGGACATTGCCTTCTCCGTGGCGCGCTTC TTCTCCGTTGGCGGCACAATGGCAAACTACTACATGTACCATGGAGGAACCAACTTTGGA AGGAACGGCGCCGCGTTCGTGATGCCGAGATACTACGACGAGGCCCCCCTCGACGAATTC GGCCTGTACAAGGAGCCTAAATGGGGCCATCTCAGGGACCTGCACCACGCTCTCCGTCAC TGCAAGAAGGCCCTCCTCTGGGGCAACCCCTCCGTTCAGCCCCTCGGCAAACTCTACGAG GCTCGGGTGTTCGAGATGAAGGAGAAGAACGTGTGCGTGGCGTTCCTGTCGAACCACAAC ACCAAGGAGGACGGGACGGTGACGTTCAGGGGGCAGAAGTACTTCGTGGCGCGGCGGTCG ATCAGCATCCTCGCCGACTGCAAGACGGTGGTGTTCAGCACGCAGCACGTCAACTCGCAG CACAACCAGCGCACCTTCCACTTCGCCGACCAGACGGTGCAGGACAACGTGTGGGAGATG TACAGTGAGGAGAAGATCCCCCGCTACAGCAAGACCTCCATCCGCACACAGAGGCCACTC GAGCAGTACAACCAGACCAAGGACAAGACCGACTACCTCTGGTACACCACCAGCTTCCGG CTGGAGACGGACGACCTGCCGTACCGGAAGGAGGTCAAGCCGGTGCTGGAGGTGAGCAGC CATGGACACGCCATCGTGGCGTTTGTCAATGACGCTTTCGTAGGGTGCGGGCACGGGACG AAGATCAACAAGGCGTTCACGATGGAGAAGGCGATGGATCTCAAAGTGGGCGTCAACCAC GTCGCCATCCTCTCCTCCACGCTGGGTCTCATGGACAGTGGGTCATACCTGGAGCACCGG ATGGCCGGGGTGTACACGGTGACGATCCGGGGGCTGAACACGGGGACGCTGGACCTGACG ACGAACGGGTGGGGGCACGTGGTGGGGCTCGACGGCGAGCGGCGGCGGGTGCACTCGGAG CAAGGGATGGGCGCGGTGGCGTGGAAGCCCGGGAAGGACAACCAGCCGCTGACGTGGTAC CGGCGGCGGTTCGACCCGCCGTCGGGGACCGACCCGGTGGTGATCGACCTCACCCCCATG GGGAAGGGCTTCCTCTTCGTCAACGGCGAGGGCCTCGGCCGCTACTGGGTCTCCTACCAC CACGCCCTCGGCAAGCCGTCGCAGTACCTCTACCACGTCCCGAGGTCGCTGCTCCGCCCC AAGGGCAACACGCTCATGTTCTTCGAGGAGGAAGGGGGCAAGCCCGACGCCATCATGATC CTGACGGTGAAGCGGGACAACATCTGCACCTTCATGACGGAGAAGAACCCGGCGCACGTC CGGTGGTCGTGGGAGAGCAAGGACAGCCAACCCAAGGCGGTGGCCGGCGCCGGCGCCGGC GCCGGCGGCCTCAAGCCGACGGCGGTGCTGTCGTGCCCGACCAAGAAGACCATCCAGTCC GTGGTGTTCGCCAGCTACGGCAACCCGCTCGGCATCTGCGGCAACTACACCGTCGGCAGC TGCCACGCGCCGCGCACCAAGGAGGTGGTCGAGAAGGCCTGCATCGGCCGGAAGACCTGC TCCCTCGTCGTCTCCAGCGAGGTCTACGGCGGCGACGTCCACTGCCCCGGCACCACCGGC ACGCTCGCCGTCCAGGCCAAGTGCTCCAAGAGGCCTCCTCGTTCCGCCGCCACCGCGCAA TAA

Peptide Sequence

PEP ID	Os08t0549200-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:27561766:27565153:1 gene:Os08g0549200 transcript:Os08t0549200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 10 description:Glycoside hydrolase, family 35 protein. (Os08t0549200-01);Similar to Beta-galactosidase. (Os08t0549200-02)
Sequence	EYQHLEVAFKEAGTKYINWAAKMAIATNTGVPWIMCKQTKAPGEVIPTCNGRHCGDTWPG PADKKKPLLWTENWTAQYRVFGDPPSQRSAEDIAFSVARFFSVGGTMANYYMYHGGTNFG RNGAAFVMPRYYDEAPLDEFGLYKEPKWGHLRDLHHALRHCKKALLWGNPSVQPLGKLYE ARVFEMKEKNVCVAFLSNHNTKEDGTVTFRGQKYFVARRSISILADCKTVVFSTQHVNSQ HNQRTFHFADQTVQDNVWEMYSEEKIPRYSKTSIRTQRPLEQYNQTKDKTDYLWYTTSFR LETDDLPYRKEVKPVLEVSSHGHAIVAFVNDAFVGCGHGTKINKAFTMEKAMDLKVGVNH VAILSSTLGLMDSGSYLEHRMAGVYTVTIRGLNTGTLDLTTNGWGHVVGLDGERRRVHSE QGMGAVAWKPGKDNQPLTWYRRRFDPPSGTDPVVIDLTPMGKGFLFVNGEGLGRYWVSYH HALGKPSQYLYHVPRSLLRPKGNTLMFFEEEGGKPDAIMILTVKRDNICTFMTEKNPAHV RWSWESKDSQPKAVAGAGAGAGGLKPTAVLSCPTKKTIQSVVFASYGNPLGICGNYTVGS CHAPRTKEVVEKACIGRKTCSLVVSSEVYGGDVHCPGTTGTLAVQAKCSKRPPRSAATAQ

Transcript Sequence

Transcript ID	Os08t0549200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27561766:27565153:1 gene:Os08g0549200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-GALACTOSIDASE 10 description:Glycoside hydrolase, family 35 protein. (Os08t0549200-01);Similar to Beta-galactosidase. (Os08t0549200-02)
Sequence	TGAGTACCAGCACCTGGAGGTGGCATTCAAAGAGGCTGGCACCAAGTACATCAACTGGGC AGCTAAGATGGCCATCGCAACCAACACTGGTGTCCCGTGGATCATGTGCAAGCAGACTAA AGCTCCTGGTGAAGTGATCCCTACCTGCAATGGGAGGCACTGTGGAGATACTTGGCCGGG TCCAGCTGACAAGAAGAAGCCCCTCTTGTGGACTGAAAACTGGACTGCTCAGTACAGAGT TTTCGGTGATCCACCGTCCCAACGTTCTGCGGAGGACATTGCCTTCTCCGTGGCGCGCTT CTTCTCCGTTGGCGGCACAATGGCAAACTACTACATGTACCATGGAGGAACCAACTTTGG AAGGAACGGCGCCGCGTTCGTGATGCCGAGATACTACGACGAGGCCCCCCTCGACGAATT CGGCCTGTACAAGGAGCCTAAATGGGGCCATCTCAGGGACCTGCACCACGCTCTCCGTCA CTGCAAGAAGGCCCTCCTCTGGGGCAACCCCTCCGTTCAGCCCCTCGGCAAACTCTACGA GGCTCGGGTGTTCGAGATGAAGGAGAAGAACGTGTGCGTGGCGTTCCTGTCGAACCACAA CACCAAGGAGGACGGGACGGTGACGTTCAGGGGGCAGAAGTACTTCGTGGCGCGGCGGTC GATCAGCATCCTCGCCGACTGCAAGACGGTGGTGTTCAGCACGCAGCACGTCAACTCGCA GCACAACCAGCGCACCTTCCACTTCGCCGACCAGACGGTGCAGGACAACGTGTGGGAGAT GTACAGTGAGGAGAAGATCCCCCGCTACAGCAAGACCTCCATCCGCACACAGAGGCCACT CGAGCAGTACAACCAGACCAAGGACAAGACCGACTACCTCTGGTACACCACCAGCTTCCG GCTGGAGACGGACGACCTGCCGTACCGGAAGGAGGTCAAGCCGGTGCTGGAGGTGAGCAG CCATGGACACGCCATCGTGGCGTTTGTCAATGACGCTTTCGTAGGGTGCGGGCACGGGAC GAAGATCAACAAGGCGTTCACGATGGAGAAGGCGATGGATCTCAAAGTGGGCGTCAACCA CGTCGCCATCCTCTCCTCCACGCTGGGTCTCATGGACAGTGGGTCATACCTGGAGCACCG GATGGCCGGGGTGTACACGGTGACGATCCGGGGGCTGAACACGGGGACGCTGGACCTGAC GACGAACGGGTGGGGGCACGTGGTGGGGCTCGACGGCGAGCGGCGGCGGGTGCACTCGGA GCAAGGGATGGGCGCGGTGGCGTGGAAGCCCGGGAAGGACAACCAGCCGCTGACGTGGTA CCGGCGGCGGTTCGACCCGCCGTCGGGGACCGACCCGGTGGTGATCGACCTCACCCCCAT GGGGAAGGGCTTCCTCTTCGTCAACGGCGAGGGCCTCGGCCGCTACTGGGTCTCCTACCA CCACGCCCTCGGCAAGCCGTCGCAGTACCTCTACCACGTCCCGAGGTCGCTGCTCCGCCC CAAGGGCAACACGCTCATGTTCTTCGAGGAGGAAGGGGGCAAGCCCGACGCCATCATGAT CCTGACGGTGAAGCGGGACAACATCTGCACCTTCATGACGGAGAAGAACCCGGCGCACGT CCGGTGGTCGTGGGAGAGCAAGGACAGCCAACCCAAGGCGGTGGCCGGCGCCGGCGCCGG CGCCGGCGGCCTCAAGCCGACGGCGGTGCTGTCGTGCCCGACCAAGAAGACCATCCAGTC CGTGGTGTTCGCCAGCTACGGCAACCCGCTCGGCATCTGCGGCAACTACACCGTCGGCAG CTGCCACGCGCCGCGCACCAAGGAGGTGGTCGAGAAGGCCTGCATCGGCCGGAAGACCTG CTCCCTCGTCGTCTCCAGCGAGGTCTACGGCGGCGACGTCCACTGCCCCGGCACCACCGG CACGCTCGCCGTCCAGGCCAAGTGCTCCAAGAGGCCTCCTCGTTCCGCCGCCACCGCGCA ATAAGCTAGCCAGCCGCCACATCTCTCTTCTTGTCTCTCATCAGATTCTCAGATAGTTAA AGCTTTGACCTGCTGCTGCTGCCGCCGCTGCTATTGTACTTTGATTGGTTCCATCCATCA TCGATCTCACTCACTTCACTGGGGAATTATTTAGGCAAACAATCAATTCATGCTCAGCTC CTTGTATGCACCATCGTCCATGGTTTTATATGTAGGTAACTGTAGATTGATTAATTGTTG ATGC