Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0548500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27511196:27513554:1 gene:Os08g0548500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os08t0548500-01)
Sequence	ATGGACGACCTGAAGGCGATCTTGGCGCGGCCGATCCAGTTGGCGGAGCAGGTGATCAAG TGGGCGGAGGAGGCGCAGACGTGCCGGCAGGAGTGCCTCGACCTCAAGGCCAAGGTGGAG CGCCTCGCCTCCCTCCTCCGCCAGGCCGCCCGCGCCGACCTCTACGAGCGCCCCGCCCGC CGCATCCTCGACGACACCGGCAAGGCCCTCGACAAGGCCGCCGCCCTCCTCGACCGCTGC CGCGGCCACGGCCTCATCCGCCGCGTCTTCACCATCATCCCCGCGGGCTCCTTCAAGAAG ACCTCCAACCAGCTCGACAACTCCCTCGGCGACCTCTCCTGGATCCTCCGCGTCTCCAAC TACTCCAACGCCGACGACCTCGACGACGACCACATCGGACTCCCCCCCATCGCCCAGAAC GAGCCCATCCTCTTCCTCATCTGGGAGCAGATCGCCGTCCTCTACACCGGCAACCCGGAG GCGCGCGCCGACGCCGCCGCCAGCATCGTCTCCCTCGCCCGCGACAACGACCGCTACGGC AGGCTCATCATCGAGGAGGACGGCGTCCCCCCGCTGCTCCGCCTCATCAAGGAGGGCTCC TCCGAGGGCCAGGAGACCGCCGCCCTCGCCATCGGCCTCCTCGGCCGCGACCCCGAGTGC GTCGAGCTCATGGTCCTCGCCGGCGTCTGCACCGCCTTCGCCAAGATCCTCAAGGACGCA CCCATGAAGGTGCAAGGGATGGTCGCCTGGGCCGTCTCCGAGCTCGCCACCAACCACCCC AAATGCCAGGACGCCTTCCTCCAGAGCAACGTCATCCGCCTCCTCGTCTCCCACCTCGCC TTCGAGACCGTCCAGGAGCACTCCAAGTACGCCGTCGCCTCCAAGATGTCCATACACACC GTCCTCATGGACAAGAAGAACAACGGCTCCACCTCCTCCTCGCACCACCACGACGCGCTA GACGCCGTCGACCACGCCGCCGCCACCACCACCACCACCACCGCCATGGCGGCCAAGCCC ACCGGAGGCGGCGCCGCCAGCTCGAGCGGCGCAGGCGCAGGATCAGCAGGAACCGGGACG ACCTCGAGCAGCAGCGTCAGCGTCGGCGGCACCGTCGCCGGGACGAAGCAGCACAACGCG TCGCTGTCCGGGACGAGCACCAAGGCGCGGGAGTTCGAGGACCCGGAGACGAAAGCCTAC CTCAAGGCCAACGCCGCCAAGGCGCTGTGGCAGCTCGCCATGGGCAACGCGGCCGTGTGC AAGAACATCACCGAGTCCAGGGCGCTGCTCTGCCTCTCCGTCCTCCTCGAGAAAGGCGTC GACGACGTGCGGTACAACTCGGCCATGGCGCTCATGGAGATCTGCCTGGTCGCCGAGCAG AACGCCGACCTCCGGCGATCGGCATTCAAGCCGACATCCCCCGCCGCCCGCGCCGTCGTC GACCAGCTCCTCCGCGTCGTCCACAAGGCCGACTACGACGAGCTCCTCATCCCATGCATC ATTTCGCTCGGCTGCCTTTCCAGAACCTTCCGGGCGACCGAGACCCGGATCATCGGGCCA TTGGTGAACCTCCTCGACGAGAGGGAAGCCGACGTCAGCCGGGAGGCGGCCGCCGCGCTC ACCAAGTTCGCCTGCACGGAGAACTACCTCCATGTCGACCACTCCAAGGCGATCATCCAC CATGGCGGCGCCAAGCACCTCGTCCAGCTCGTCTACTTCGCCGAGCAGGCCGTCCAGATC GCCGCGCTCCTCCTCGTGTGCTACATTGCGCACAACGTCCCCGACAACGAGGAGCTCGCG CAAGCGGAGATCCTCACCTTGCTCGAGTGGGCATCAAAGCAAGCGGCCATGGTGCAAGAT CCATTGATCGAGAACTTGTTGCTGGAGGCCAAGATTAGAATGGAGCTCTACCAATCCAGA GGGGCAAAAGGTTACTACTGA

Peptide Sequence

PEP ID	Os08t0548500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27511196:27513554:1 gene:Os08g0548500 transcript:Os08t0548500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os08t0548500-01)
Sequence	MDDLKAILARPIQLAEQVIKWAEEAQTCRQECLDLKAKVERLASLLRQAARADLYERPAR RILDDTGKALDKAAALLDRCRGHGLIRRVFTIIPAGSFKKTSNQLDNSLGDLSWILRVSN YSNADDLDDDHIGLPPIAQNEPILFLIWEQIAVLYTGNPEARADAAASIVSLARDNDRYG RLIIEEDGVPPLLRLIKEGSSEGQETAALAIGLLGRDPECVELMVLAGVCTAFAKILKDA PMKVQGMVAWAVSELATNHPKCQDAFLQSNVIRLLVSHLAFETVQEHSKYAVASKMSIHT VLMDKKNNGSTSSSHHHDALDAVDHAAATTTTTTAMAAKPTGGGAASSSGAGAGSAGTGT TSSSSVSVGGTVAGTKQHNASLSGTSTKAREFEDPETKAYLKANAAKALWQLAMGNAAVC KNITESRALLCLSVLLEKGVDDVRYNSAMALMEICLVAEQNADLRRSAFKPTSPAARAVV DQLLRVVHKADYDELLIPCIISLGCLSRTFRATETRIIGPLVNLLDEREADVSREAAAAL TKFACTENYLHVDHSKAIIHHGGAKHLVQLVYFAEQAVQIAALLLVCYIAHNVPDNEELA QAEILTLLEWASKQAAMVQDPLIENLLLEAKIRMELYQSRGAKGYY

Transcript Sequence

Transcript ID	Os08t0548500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27511196:27513554:1 gene:Os08g0548500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os08t0548500-01)
Sequence	AGGGCATCCACATCTCGCGCGGCGCTCGCCTCACATGCACATGCCGCTCCCCTTCCCCCA ATTAGCGATCCCACCCCCACCGCCCGCCGGTTTCTCCGCCGCCGCCGCCGGAGGAGCACG GCCGGAATCCCCCCCAAGCCGAGGAGGTGCTCCTCCTCCTCCTGTCTCGCCGCCATTGCT GATCGTCGGCGGGGATCATCATAGATGGACGACCTGAAGGCGATCTTGGCGCGGCCGATC CAGTTGGCGGAGCAGGTGATCAAGTGGGCGGAGGAGGCGCAGACGTGCCGGCAGGAGTGC CTCGACCTCAAGGCCAAGGTGGAGCGCCTCGCCTCCCTCCTCCGCCAGGCCGCCCGCGCC GACCTCTACGAGCGCCCCGCCCGCCGCATCCTCGACGACACCGGCAAGGCCCTCGACAAG GCCGCCGCCCTCCTCGACCGCTGCCGCGGCCACGGCCTCATCCGCCGCGTCTTCACCATC ATCCCCGCGGGCTCCTTCAAGAAGACCTCCAACCAGCTCGACAACTCCCTCGGCGACCTC TCCTGGATCCTCCGCGTCTCCAACTACTCCAACGCCGACGACCTCGACGACGACCACATC GGACTCCCCCCCATCGCCCAGAACGAGCCCATCCTCTTCCTCATCTGGGAGCAGATCGCC GTCCTCTACACCGGCAACCCGGAGGCGCGCGCCGACGCCGCCGCCAGCATCGTCTCCCTC GCCCGCGACAACGACCGCTACGGCAGGCTCATCATCGAGGAGGACGGCGTCCCCCCGCTG CTCCGCCTCATCAAGGAGGGCTCCTCCGAGGGCCAGGAGACCGCCGCCCTCGCCATCGGC CTCCTCGGCCGCGACCCCGAGTGCGTCGAGCTCATGGTCCTCGCCGGCGTCTGCACCGCC TTCGCCAAGATCCTCAAGGACGCACCCATGAAGGTGCAAGGGATGGTCGCCTGGGCCGTC TCCGAGCTCGCCACCAACCACCCCAAATGCCAGGACGCCTTCCTCCAGAGCAACGTCATC CGCCTCCTCGTCTCCCACCTCGCCTTCGAGACCGTCCAGGAGCACTCCAAGTACGCCGTC GCCTCCAAGATGTCCATACACACCGTCCTCATGGACAAGAAGAACAACGGCTCCACCTCC TCCTCGCACCACCACGACGCGCTAGACGCCGTCGACCACGCCGCCGCCACCACCACCACC ACCACCGCCATGGCGGCCAAGCCCACCGGAGGCGGCGCCGCCAGCTCGAGCGGCGCAGGC GCAGGATCAGCAGGAACCGGGACGACCTCGAGCAGCAGCGTCAGCGTCGGCGGCACCGTC GCCGGGACGAAGCAGCACAACGCGTCGCTGTCCGGGACGAGCACCAAGGCGCGGGAGTTC GAGGACCCGGAGACGAAAGCCTACCTCAAGGCCAACGCCGCCAAGGCGCTGTGGCAGCTC GCCATGGGCAACGCGGCCGTGTGCAAGAACATCACCGAGTCCAGGGCGCTGCTCTGCCTC TCCGTCCTCCTCGAGAAAGGCGTCGACGACGTGCGGTACAACTCGGCCATGGCGCTCATG GAGATCTGCCTGGTCGCCGAGCAGAACGCCGACCTCCGGCGATCGGCATTCAAGCCGACA TCCCCCGCCGCCCGCGCCGTCGTCGACCAGCTCCTCCGCGTCGTCCACAAGGCCGACTAC GACGAGCTCCTCATCCCATGCATCATTTCGCTCGGCTGCCTTTCCAGAACCTTCCGGGCG ACCGAGACCCGGATCATCGGGCCATTGGTGAACCTCCTCGACGAGAGGGAAGCCGACGTC AGCCGGGAGGCGGCCGCCGCGCTCACCAAGTTCGCCTGCACGGAGAACTACCTCCATGTC GACCACTCCAAGGCGATCATCCACCATGGCGGCGCCAAGCACCTCGTCCAGCTCGTCTAC TTCGCCGAGCAGGCCGTCCAGATCGCCGCGCTCCTCCTCGTGTGCTACATTGCGCACAAC GTCCCCGACAACGAGGAGCTCGCGCAAGCGGAGATCCTCACCTTGCTCGAGTGGGCATCA AAGCAAGCGGCCATGGTGCAAGATCCATTGATCGAGAACTTGTTGCTGGAGGCCAAGATT AGAATGGAGCTCTACCAATCCAGAGGGGCAAAAGGTTACTACTGAGATGCACGGTTTTGA TGCAGAAAGAGGCACATGTAGGATGATACTACCAAGATGATGGACCGGCTTCTTCTTCTT CGTCGTCGTCTTCGTTGCATCAACCAGCTGACTACTGTATATATATTCAGGTGTTTTTTG GTTGACTTGAATTGAATTGTTGATGCAATCAGTTGGATTCCATGTTTGGTTGGAAGAGAT TGATTTTGTCCCGGGCATC