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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0548400-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27507734:27508477:1 gene:Os08g0548400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C66, rice DJC23 homolog description:Similar to chaperone protein dnaJ 11. (Os08t0548400-00)
Sequence

ATGATTTCTGCGCCTTCTGTGGGGATCGCCTTCGCGCCCAAGCCGCCACCGGCAGCGGCG
GTTGGGTCGTACCGGGCAAGGAAGGTCCGGTGCGCGGTGGCCGTGGCTCCTGCGCCGGCG
CCGGCGGGGACGCTGTACGACGTGCTGGGGCTGCGTGCCGGCGCCACGGTGCGGGAGATC
AAGGCGGCGTACCGGCGCCTCGCGCGGGAGCGGCACCCCGACGTGGCCGCCAGCGCCGGG
GCCGACGACTTCGTCAGGCTCCACGACGCCTACGCCACGCTCTCCGACCCCGACAGCCGC
GCGCGCTACGACCGCGACGTCGTCGCCGTCGCCTCCATGGCGCGCGGCGCGCACCACCGG
ACGATGGCGGCTCCCGCCGCCGCGCCGCGCTGGTACGGCCGCCGCCCACGCCGCACCTGG
GAGACCGACCAGTGCTGGTAG

Peptide Sequence

PEP ID

Os08t0548400-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27507734:27508477:1 gene:Os08g0548400 transcript:Os08t0548400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C66, rice DJC23 homolog description:Similar to chaperone protein dnaJ 11. (Os08t0548400-00)
Sequence

MISAPSVGIAFAPKPPPAAAVGSYRARKVRCAVAVAPAPAPAGTLYDVLGLRAGATVREI
KAAYRRLARERHPDVAASAGADDFVRLHDAYATLSDPDSRARYDRDVVAVASMARGAHHR
TMAAPAAAPRWYGRRPRRTWETDQCW

Transcript Sequence

Transcript ID

Os08t0548400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27507734:27508477:1 gene:Os08g0548400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C66, rice DJC23 homolog description:Similar to chaperone protein dnaJ 11. (Os08t0548400-00)
Sequence

ATCTGCTTCTTGCCCACCATTCCTCTCTTCCTTCCTTCTCATGATTTCTGCGCCTTCTGT
GGGGATCGCCTTCGCGCCCAAGCCGCCACCGGCAGCGGCGGTTGGGTCGTACCGGGCAAG
GAAGGTCCGGTGCGCGGTGGCCGTGGCTCCTGCGCCGGCGCCGGCGGGGACGCTGTACGA
CGTGCTGGGGCTGCGTGCCGGCGCCACGGTGCGGGAGATCAAGGCGGCGTACCGGCGCCT
CGCGCGGGAGCGGCACCCCGACGTGGCCGCCAGCGCCGGGGCCGACGACTTCGTCAGGCT
CCACGACGCCTACGCCACGCTCTCCGACCCCGACAGCCGCGCGCGCTACGACCGCGACGT
CGTCGCCGTCGCCTCCATGGCGCGCGGCGCGCACCACCGGACGATGGCGGCTCCCGCCGC
CGCGCCGCGCTGGTACGGCCGCCGCCCACGCCGCACCTGGGAGACCGACCAGTGCTGGTA
GCGCACACACGCGATTTCTGTCTCTTCACGGCCATGGCCGCTCACCTCACAAATTTTTAG
TTACGGTGATCACCCATGCCTGCCTATGTAAAAAAAAAGTAAAATCTTCCTCCTCGCATC
GATCCCTTGTGTATGAATGTAAAATGCAAAATTGAGACTAGGTAGCGTATTAGGAATCCA
GACTTAACCCAATCATCATCATGTACTGTGAATATGTACTTACTACTGTATTGTACTAGC
GTGTTTTGACGCGAGGTTTGAAGG