Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0546400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27365138:27370823:-1 gene:Os08g0546400 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain containing protein. (Os08t0546400-01)
Sequence	ATGGTGAGGCCGACGCAGGACGCGATCGACACCTTCGTCGGCATCACCGGCGCCGATGAG GCCGTCGCCGCCCGCAAGCTCGAGGAACATCATGGTGACCTAAATGAAGCTGTGAATGCC TATTTCAATGAAGGAGATAGGACCAGCACCAGAGCCAATGAAAATCCTATACCTACCGGT TATGATGACATGGAGTTGGATGAACCATTTGGTCCTGTTCCTACATTTCACATGCCTTTG GGCAACCCTTTTTCACTTCTGGATCAAGGTTTTTTAGAACGAGCTGCTGCTGTGTATGGT GAGGGACCTCATATTACACACCCTAGGGAGGTGAGGCGGATAGATGTTGAAGTTAAGGAC AACAATACTCCAGCAGGTAGTTCTGGTCATGGTCCTGTTATTGAAGATGTTACTGGACAT GAGTTTTCACATGGGCCGGAAATTCGTGGGACTGTTCTGATTGATGAAGATGATGATGAT GATAACTTGCCATCTGCTCAAGATACTCGTCTCCCAAGCAATCCTTCAACTTCAAACTAT TCTGTACCAAGAGCTCCTCCAATTGCTAATGTTAGTGACTACAACAATGACATAGAAGAG GAGATGGTTCGCGCTGCAATAGAAGCATCAAAAAGGGACGCAGATGGACTGACAAATGGT CTAAGAAGTGGAGAACGTGAAAATGCATCACGTGGCAGAGATGATGATGAGATTGCTCGG GCGGTTTCTATGTCCTTGGAGACAGCAGAACAAGAGAGAGTTCTGCGCCAAGTGGGAGCG CATGTGTCTGATCATTCTGATTTATCCGATAAGGAAGACATTGAAGGAGCAACTGGGACA GTGGAAAGGCAAGTACCAACTTCAGGGAAAGTTGGAACATCTGATCAGTTGGTAGATGAA GAGAATTTCCAGGATGATGACGTTGAGGAACATTCTTTTGTTAGACAACACTCTAGGCGT GTACCATCTGGAAATGATGAGTCCACAGAAGCACTTGAAAGGGCCAACAGTCATCCATCC AGTCTCCTCCCTCATAACATTGAAAACAATCAGCAGTTCAATGGAGTTTTTCCATCAGAG TGGGGTGGCATTTCTTCTGAAGAACATGATGAAGCTGTTATGCTTGAAGCTGCAATGTTT GGTGGAATTCCTGGAAGAGCAGCATATCCATTTTCTCTCCCGTATCATCAAAACTCAAGT CGCTACCCCACGGTTGCTCATCCTCCGTCACCAACATTAACTGCACAACGGTTGTTAAGG GAGCAGCAGGACGATGAGTATCTAGCATCTCTCGAAGCTGACCGAGAAAAAGAATTGAAG GCAGAGCAGGAGGCTGAGCTCCGCAGATTAGAAGCTGCTGCTGAAAGAGAAGCTGCTATT GCAAAGCAAAAACAAGAGGAGGAAGAAAAGCGAAGAAAACAACTCGAGGAAGAGGAATTG GAGTCCAAGCTTGCAGCCAAACAAGCATCATTGCCAAAGGAGCCATTACCAGATGATGTA GGGGCCGTCACTGTTGTAGTTCGCATGCCTGATGGTCGTCGTCAGGGAAGGCGCTTTATG AAATCCGACAACCTTCAGGTCCTTTTTGATTTCATAGATATCTCCAGGACTTTCAAACCA GGAACCTATAGGCTGGTGAGGTCTTATCCCAGGCGTGCATTCACCGACTCTGAGTCTCAG ATGTCTTTAAGTGATCTTGGCCTCAATAGCAAGCAGGAAGCCTTGTTTCTAGAGCAGATT TCAGGATAG

Peptide Sequence

PEP ID	Os08t0546400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27365138:27370823:-1 gene:Os08g0546400 transcript:Os08t0546400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain containing protein. (Os08t0546400-01)
Sequence	MVRPTQDAIDTFVGITGADEAVAARKLEEHHGDLNEAVNAYFNEGDRTSTRANENPIPTG YDDMELDEPFGPVPTFHMPLGNPFSLLDQGFLERAAAVYGEGPHITHPREVRRIDVEVKD NNTPAGSSGHGPVIEDVTGHEFSHGPEIRGTVLIDEDDDDDNLPSAQDTRLPSNPSTSNY SVPRAPPIANVSDYNNDIEEEMVRAAIEASKRDADGLTNGLRSGERENASRGRDDDEIAR AVSMSLETAEQERVLRQVGAHVSDHSDLSDKEDIEGATGTVERQVPTSGKVGTSDQLVDE ENFQDDDVEEHSFVRQHSRRVPSGNDESTEALERANSHPSSLLPHNIENNQQFNGVFPSE WGGISSEEHDEAVMLEAAMFGGIPGRAAYPFSLPYHQNSSRYPTVAHPPSPTLTAQRLLR EQQDDEYLASLEADREKELKAEQEAELRRLEAAAEREAAIAKQKQEEEEKRRKQLEEEEL ESKLAAKQASLPKEPLPDDVGAVTVVVRMPDGRRQGRRFMKSDNLQVLFDFIDISRTFKP GTYRLVRSYPRRAFTDSESQMSLSDLGLNSKQEALFLEQISG

Transcript Sequence

Transcript ID	Os08t0546400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27365138:27370823:-1 gene:Os08g0546400 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain containing protein. (Os08t0546400-01)
Sequence	GCGACTCCTCCTCCTCTTCTCGTCTTGGGTTTCTCTCCCTCCTCCTCGCCGTCGCGTCGC CGCGGAGGCGGAGGCGGAGAGCCAAGGCCGCGGCGGTGCAGCCGCCCTCCCCTCCTCCCG CCGCCATGGTGAGGCCGACGCAGGACGCGATCGACACCTTCGTCGGCATCACCGGCGCCG ATGAGGCCGTCGCCGCCCGCAAGCTCGAGGAACATCATGGTGACCTAAATGAAGCTGTGA ATGCCTATTTCAATGAAGGAGATAGGACCAGCACCAGAGCCAATGAAAATCCTATACCTA CCGGTTATGATGACATGGAGTTGGATGAACCATTTGGTCCTGTTCCTACATTTCACATGC CTTTGGGCAACCCTTTTTCACTTCTGGATCAAGGTTTTTTAGAACGAGCTGCTGCTGTGT ATGGTGAGGGACCTCATATTACACACCCTAGGGAGGTGAGGCGGATAGATGTTGAAGTTA AGGACAACAATACTCCAGCAGGTAGTTCTGGTCATGGTCCTGTTATTGAAGATGTTACTG GACATGAGTTTTCACATGGGCCGGAAATTCGTGGGACTGTTCTGATTGATGAAGATGATG ATGATGATAACTTGCCATCTGCTCAAGATACTCGTCTCCCAAGCAATCCTTCAACTTCAA ACTATTCTGTACCAAGAGCTCCTCCAATTGCTAATGTTAGTGACTACAACAATGACATAG AAGAGGAGATGGTTCGCGCTGCAATAGAAGCATCAAAAAGGGACGCAGATGGACTGACAA ATGGTCTAAGAAGTGGAGAACGTGAAAATGCATCACGTGGCAGAGATGATGATGAGATTG CTCGGGCGGTTTCTATGTCCTTGGAGACAGCAGAACAAGAGAGAGTTCTGCGCCAAGTGG GAGCGCATGTGTCTGATCATTCTGATTTATCCGATAAGGAAGACATTGAAGGAGCAACTG GGACAGTGGAAAGGCAAGTACCAACTTCAGGGAAAGTTGGAACATCTGATCAGTTGGTAG ATGAAGAGAATTTCCAGGATGATGACGTTGAGGAACATTCTTTTGTTAGACAACACTCTA GGCGTGTACCATCTGGAAATGATGAGTCCACAGAAGCACTTGAAAGGGCCAACAGTCATC CATCCAGTCTCCTCCCTCATAACATTGAAAACAATCAGCAGTTCAATGGAGTTTTTCCAT CAGAGTGGGGTGGCATTTCTTCTGAAGAACATGATGAAGCTGTTATGCTTGAAGCTGCAA TGTTTGGTGGAATTCCTGGAAGAGCAGCATATCCATTTTCTCTCCCGTATCATCAAAACT CAAGTCGCTACCCCACGGTTGCTCATCCTCCGTCACCAACATTAACTGCACAACGGTTGT TAAGGGAGCAGCAGGACGATGAGTATCTAGCATCTCTCGAAGCTGACCGAGAAAAAGAAT TGAAGGCAGAGCAGGAGGCTGAGCTCCGCAGATTAGAAGCTGCTGCTGAAAGAGAAGCTG CTATTGCAAAGCAAAAACAAGAGGAGGAAGAAAAGCGAAGAAAACAACTCGAGGAAGAGG AATTGGAGTCCAAGCTTGCAGCCAAACAAGCATCATTGCCAAAGGAGCCATTACCAGATG ATGTAGGGGCCGTCACTGTTGTAGTTCGCATGCCTGATGGTCGTCGTCAGGGAAGGCGCT TTATGAAATCCGACAACCTTCAGGTCCTTTTTGATTTCATAGATATCTCCAGGACTTTCA AACCAGGAACCTATAGGCTGGTGAGGTCTTATCCCAGGCGTGCATTCACCGACTCTGAGT CTCAGATGTCTTTAAGTGATCTTGGCCTCAATAGCAAGCAGGAAGCCTTGTTTCTAGAGC AGATTTCAGGATAGGGGGAAACCGGGAAAGAGTTAATTGCAATTAACACAACAGGGATTC ACAGAATTTTTTTTTCTTTTTACTTATGCCTGGCACATGTTCGTGAAAATATTAGCAAGG TTCGCATGAAACTTGGCGTTAAGGTCTCATGACCCTCTTTTGTGTTTTGGAATGGTGACT CTCAAGTACCGGGTTTCATGTGATACTCACCCTGCATATTTGAACAGTCAGAACTCAGAA TGTACATAGACTGCTGCTTTCAGAGCTACCGCAATTCATC