Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0545900-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:27345271:27346904:-1 gene:Os08g0545900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os08t0545900-00)
Sequence	ATGTGCCACTGCTCGTCCAAGGTCGTAGCCGTAGCACAATGCCACCAGCCTCTGCTCCCG CCACCGGAGGCATGCCCCGCCCTGCATGACCGCCCCAGGTCGGCGCGCGGCGGCGGCGGC GCGATCGCCGAGGTGGCATCCATCGTGCGGCTCGCCATGCCGATGGTTGGAGCTGGGCTG CTGATGTACATGCGCTCGCTGGTATCCATGCTCTTTCTTGGCCGGCTTGGCCGTCTCCCG CTCGCCGGCGGCTCCCTCGCGCTCGGCTTCGCCAACATCACCGGGTACTCGGTGCTGTCC GGGCTCGCCGCCGGGATGGACCCCGTGTGCGGCCAGGCGTTCGGCGCCGGCCGCACGTCC GTGCTCGCCGCCGCGCTCCGGCGAACGGTCGTGCTGCTCCTCGCCGCGTCCGTGCCCATC GCCGCGCTCTGGCTCGCCATGCACCGGGTCCTCGTCGCCGCCGGCCAGGACCCCGACATT GCCGCCTGCGCCTACGAGTTCATCCTCTGCTCGCTCCCGGACCTCGCCGTGCAGTCCTTC CTCCACCCGCTCCGCGTGTACCTCCGCGCGCAGTCCATCACGCTCCCGCTCACGTACGCC GCCGCCGCCGCGCTCGCGCTCCACGTCCCCGTCAACGTCCTCCTCGTGCACGGCCTCGGC CTCGGGATCCGCGGCGTCGCGCTCGCCGCCGTCTGGACCAACCTCAACTTCTTGCTGTTC CTCGTGGCGTACGCCTACTTCTCAGGTCTGATTCGTGGCGACGACGACGACGACGGCGGC AATGGCAAAGCCGGCGAGGAGGGCGCGACGACGACGACGACGACGATGGAGTGGGGGTGG TTGGTGAAGCTGTCCGTGCACAGCTGCATGTCGGTGTGCTTGGAGTGGTGGTGGTACGAG ATCATGGTGCTGCTCTGCGGCGTGCTCGCCGACCCGAAGGCGGCGGTGGCGGCGATGGGG ATACTGATCCAGACCACGTCGCTGCTGTACATCTTCCCGCACTCCCTCAGCTGCGCCGTG TCGACGCGCGTCGGGCACGAGCTCGGCGCGGGGCGGCCGGAGCGCGCGCGCCTCGCCGCC CGCGTCGGGCTCGCCTGCGGCGCCGCGCTCGGCGTCGTGGCGTGCGCGTTCGCGGCGTCC CTGAGAGGGGTGTGGGCGCGGATGTTCACCGCCGACGCCACCATCCTGCGGCTGGCGTCG TCGGCGCTGCCCATCCTCGGCGCCGCCGAGCTGGGGAACTGCCCGCAGACGGTCGGCTGC GGTGTGCTGCGCGGCAGCGCGCGGCCGGGGAGGGCGGCGAGGATCAACGTCTCGGCGTTC TACGGCGTCGGCATGCCCGCCGCCCTGGCGCTGGCGTTCTGGCCGGCGCGCCTCGACTTC CGCGGCATGTGGGCCGGCATGCTCGCCGCGCAGCTGGTGTGCGCGGCGCTGATGCTGCTC GCCGTGCGGCGCACCGACTGGGACGAGCAGGCCGCCCGCGCGCGCGAGATCACCGGCGCC GTCGCCGGCGTCGTCGTTGGCGATGGCGACGTCGTCGTCAAAGGCGATCATGCAGACGCC GCCAAAGTAAAGGCAGACAGTGGCTTGCTCGTGGTCACAGTGCTAAGTTGA

Peptide Sequence

PEP ID	Os08t0545900-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:27345271:27346904:-1 gene:Os08g0545900 transcript:Os08t0545900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os08t0545900-00)
Sequence	MCHCSSKVVAVAQCHQPLLPPPEACPALHDRPRSARGGGGAIAEVASIVRLAMPMVGAGL LMYMRSLVSMLFLGRLGRLPLAGGSLALGFANITGYSVLSGLAAGMDPVCGQAFGAGRTS VLAAALRRTVVLLLAASVPIAALWLAMHRVLVAAGQDPDIAACAYEFILCSLPDLAVQSF LHPLRVYLRAQSITLPLTYAAAAALALHVPVNVLLVHGLGLGIRGVALAAVWTNLNFLLF LVAYAYFSGLIRGDDDDDGGNGKAGEEGATTTTTTMEWGWLVKLSVHSCMSVCLEWWWYE IMVLLCGVLADPKAAVAAMGILIQTTSLLYIFPHSLSCAVSTRVGHELGAGRPERARLAA RVGLACGAALGVVACAFAASLRGVWARMFTADATILRLASSALPILGAAELGNCPQTVGC GVLRGSARPGRAARINVSAFYGVGMPAALALAFWPARLDFRGMWAGMLAAQLVCAALMLL AVRRTDWDEQAARAREITGAVAGVVVGDGDVVVKGDHADAAKVKADSGLLVVTVLS

Transcript Sequence

Transcript ID	Os08t0545900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27345271:27346904:-1 gene:Os08g0545900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Multi antimicrobial extrusion protein MatE family protein. (Os08t0545900-00)
Sequence	ATGTGCCACTGCTCGTCCAAGGTCGTAGCCGTAGCACAATGCCACCAGCCTCTGCTCCCG CCACCGGAGGCATGCCCCGCCCTGCATGACCGCCCCAGGTCGGCGCGCGGCGGCGGCGGC GCGATCGCCGAGGTGGCATCCATCGTGCGGCTCGCCATGCCGATGGTTGGAGCTGGGCTG CTGATGTACATGCGCTCGCTGGTATCCATGCTCTTTCTTGGCCGGCTTGGCCGTCTCCCG CTCGCCGGCGGCTCCCTCGCGCTCGGCTTCGCCAACATCACCGGGTACTCGGTGCTGTCC GGGCTCGCCGCCGGGATGGACCCCGTGTGCGGCCAGGCGTTCGGCGCCGGCCGCACGTCC GTGCTCGCCGCCGCGCTCCGGCGAACGGTCGTGCTGCTCCTCGCCGCGTCCGTGCCCATC GCCGCGCTCTGGCTCGCCATGCACCGGGTCCTCGTCGCCGCCGGCCAGGACCCCGACATT GCCGCCTGCGCCTACGAGTTCATCCTCTGCTCGCTCCCGGACCTCGCCGTGCAGTCCTTC CTCCACCCGCTCCGCGTGTACCTCCGCGCGCAGTCCATCACGCTCCCGCTCACGTACGCC GCCGCCGCCGCGCTCGCGCTCCACGTCCCCGTCAACGTCCTCCTCGTGCACGGCCTCGGC CTCGGGATCCGCGGCGTCGCGCTCGCCGCCGTCTGGACCAACCTCAACTTCTTGCTGTTC CTCGTGGCGTACGCCTACTTCTCAGGTCTGATTCGTGGCGACGACGACGACGACGGCGGC AATGGCAAAGCCGGCGAGGAGGGCGCGACGACGACGACGACGACGATGGAGTGGGGGTGG TTGGTGAAGCTGTCCGTGCACAGCTGCATGTCGGTGTGCTTGGAGTGGTGGTGGTACGAG ATCATGGTGCTGCTCTGCGGCGTGCTCGCCGACCCGAAGGCGGCGGTGGCGGCGATGGGG ATACTGATCCAGACCACGTCGCTGCTGTACATCTTCCCGCACTCCCTCAGCTGCGCCGTG TCGACGCGCGTCGGGCACGAGCTCGGCGCGGGGCGGCCGGAGCGCGCGCGCCTCGCCGCC CGCGTCGGGCTCGCCTGCGGCGCCGCGCTCGGCGTCGTGGCGTGCGCGTTCGCGGCGTCC CTGAGAGGGGTGTGGGCGCGGATGTTCACCGCCGACGCCACCATCCTGCGGCTGGCGTCG TCGGCGCTGCCCATCCTCGGCGCCGCCGAGCTGGGGAACTGCCCGCAGACGGTCGGCTGC GGTGTGCTGCGCGGCAGCGCGCGGCCGGGGAGGGCGGCGAGGATCAACGTCTCGGCGTTC TACGGCGTCGGCATGCCCGCCGCCCTGGCGCTGGCGTTCTGGCCGGCGCGCCTCGACTTC CGCGGCATGTGGGCCGGCATGCTCGCCGCGCAGCTGGTGTGCGCGGCGCTGATGCTGCTC GCCGTGCGGCGCACCGACTGGGACGAGCAGGCCGCCCGCGCGCGCGAGATCACCGGCGCC GTCGCCGGCGTCGTCGTTGGCGATGGCGACGTCGTCGTCAAAGGCGATCATGCAGACGCC GCCAAAGTAAAGGCAGACAGTGGCTTGCTCGTGGTCACAGTGCTAAGTTGATTGCCATAT AATGGAGTATTCTT