Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0545000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27306912:27309437:-1 gene:Os08g0545000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os08t0545000-01)
Sequence	ATGCTCTTGCTCATCAACAAGTACCTGTCCAGGAGCAAGAACCCGGCAGCCGGCGACGAC AAGGAGATGCCACCGCCGCCGCCGCCACCGCCGGCGAACGGAGCGGAGCGTGAGTTCATG TGCATCCCCGGCTGCGTGCCGGTGCGCGTCAAGAGGGGAACCACGACGACGACGACGACG ACGACCACGGCGAGGACGTCGCGGCACAATTTCGTCAAGTCGGCGGCGTCAGGGCTGTTC CCCGGCGCGCAGTTCACCAACCACGAGTCGCTCCCGGCGATGGAGGAGGCGTACGCCGAG TTCGTCGCCGCGTTCCCGCAGTACGCCGGGCTCGCCCAGGCCGACGCCATCAGGGACGGC GAGTACCAGCACCTCGACCGCCACGTGTGCCTCGACTACACCGGCATCAACCTCTTCTCC CACGCGCAGATGAACTCGTCGGTGCCGTCGACGTCGGCCACGCCGCCGGCGTCGTCGTCG GGCGCGGCGTGGCAGCCGCCGTTCTTTGACATCGCGTACAAGTCCACGAGCCTGCGGTCG CAGGTGCAATGCGGGGACGACGTCGCGGCGGCGTCCGCGGCGGGCGGGATCGGCGGCGCC GTGACGAGGCGCGTCATGGCGTCGCTCAACATCCCCGACGACGAGTACGCCATGGTGTGC ACGGCGAACCGGACCACCGCGTTCCGGCTGCTGGCGGAGTCCTACTCCTTCCAGCAGCAC GGCAAGCGGCTGCTCACCGTGTACGACTACGAGAGCGAGGCGGCGGGCGCGATGGCGGAG AGCGCGCGCCGCCGCGGTGCGGAGGTGATGTCGGCGACGTTCGCGTGGCCGGGCATGCGC GTCCACGCCGCCGACCTCCGCAAGAAGCTGCTCCGCGGGAGGCGGCGCGGCGGCGGCGGC GGGCACCGGAGGGGGCTCTTCGTGTTCCCGCTGGTGTCGCGGATGACGGGGGCCAGGTAC CCATACCTGTGGATGAGCGCGGCGCACGAACAAGGGTGGCACGTCGCGCTCGACGCGTGC GCGCTGGGCACCAAGGACCTCGACACGCTGGGCCTCTCCCTCCTCCGCCCGGACTTCATC GTCTGCAACTTCTTCAAGGTGTTCGGCGAGAACCCCTCCGGCTTCGCGGGCCTCTTCGTC AAGAAGTCCAGCCTCGCCGCGCTGGAGCGCTCCGTCATCGCCCGCAGCATCGGCATCGTC AGCATCGTCCCCGCACGCCGCTGGTCGCTCCACGACGGCTACTCCACCGAGCTCGACCCG GTCGCCGCGGCGGCGGACGACCTCGACACCACCAGCTCCTTCTCCGGCCCACTCAGTGGC ACCCTCATCGCGCTCACACTCAAGAACGTACCGGAGATGGACGCCGCAGGCGAGGAGAAC GGCCACTCGCCGGAGATCCGCGAGGCCGATCCGCCGCCACCACCACCGCCAATAATGGAG GTGGAGTGCAGGGGGCTGGACCACGCGGACGCGCTGGGGCTGATCGCCATAGGCAACCGG CTGAGGTGCATCAGCAACTGGCTGGTGGTGGCGATGCAGAAGCTGCGGCACCCGCAGTCG GAGCAGGGGAAGGCGCTGGTGCGGGTGTACGGGCCGCGGGTGAAGTTCGAGCGGGGGCCA TCGCTGGCGTTCAACGTGTTCGACTGGAAGGGGGAGAAGGTGGCGCCGCCGCTGGTGCAG AAGCTCGCCGACCGCCACAACATCTCCCTCACCTGCGGCTTCCTCCGCCACATCTGCTTC TCCGACAAGTACGACGCCGACAGGGCCGCCGTCCTCGAGCACATCGACGGCGGCGGCAAG AGGAAGGACGCCGCCGGCGAGATGGGGATCTACGTGGTGAACGCGTCGCTGGGGTTCTTG ACCAACTTCGACGACGCCTACAGGTTGTGGGCGTTCGTGGCCAAGTTCTTGGACGCCGAT TTCGTGGAGAAGGAGCGGTGGAGGTACACCGCGCTCAACCAGAAGACGGTGGAGGTGTAG

Peptide Sequence

PEP ID	Os08t0545000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27306912:27309437:-1 gene:Os08g0545000 transcript:Os08t0545000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os08t0545000-01)
Sequence	MLLLINKYLSRSKNPAAGDDKEMPPPPPPPPANGAEREFMCIPGCVPVRVKRGTTTTTTT TTTARTSRHNFVKSAASGLFPGAQFTNHESLPAMEEAYAEFVAAFPQYAGLAQADAIRDG EYQHLDRHVCLDYTGINLFSHAQMNSSVPSTSATPPASSSGAAWQPPFFDIAYKSTSLRS QVQCGDDVAAASAAGGIGGAVTRRVMASLNIPDDEYAMVCTANRTTAFRLLAESYSFQQH GKRLLTVYDYESEAAGAMAESARRRGAEVMSATFAWPGMRVHAADLRKKLLRGRRRGGGG GHRRGLFVFPLVSRMTGARYPYLWMSAAHEQGWHVALDACALGTKDLDTLGLSLLRPDFI VCNFFKVFGENPSGFAGLFVKKSSLAALERSVIARSIGIVSIVPARRWSLHDGYSTELDP VAAAADDLDTTSSFSGPLSGTLIALTLKNVPEMDAAGEENGHSPEIREADPPPPPPPIME VECRGLDHADALGLIAIGNRLRCISNWLVVAMQKLRHPQSEQGKALVRVYGPRVKFERGP SLAFNVFDWKGEKVAPPLVQKLADRHNISLTCGFLRHICFSDKYDADRAAVLEHIDGGGK RKDAAGEMGIYVVNASLGFLTNFDDAYRLWAFVAKFLDADFVEKERWRYTALNQKTVEV

Transcript Sequence

Transcript ID	Os08t0545000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27306912:27309437:-1 gene:Os08g0545000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein. (Os08t0545000-01)
Sequence	GCTTGGTATGTTGCTGTCACTCCCTGTGAGCCTGTGGCCAACTGAATGAAAAAAAAAAGG AAAAAAAAACAAGCCTTTTTCCCAGCAGCAGGACAGCCACTGGCGCGCACATCGATCCAT CGATCACCACTTCACCACCAAGAGCCGAGCAAAAAAGCTAGCCGGAGAAGAAAACCAGGA GGCGGCGGCGGCGGCGGCCGGCGACGAGGGAGAAGCAGTCGCATGCGGCCACTCGGCGGC CATCCGGTCGCTCTCGCCGTGACAGCAGCAGCAGCAATTGCAACTCGCCGAGCTCATCCA AGACAACCCTATCCATGAGGCAACCATGCTCTTGCTCATCAACAAGTACCTGTCCAGGAG CAAGAACCCGGCAGCCGGCGACGACAAGGAGATGCCACCGCCGCCGCCGCCACCGCCGGC GAACGGAGCGGAGCGTGAGTTCATGTGCATCCCCGGCTGCGTGCCGGTGCGCGTCAAGAG GGGAACCACGACGACGACGACGACGACGACCACGGCGAGGACGTCGCGGCACAATTTCGT CAAGTCGGCGGCGTCAGGGCTGTTCCCCGGCGCGCAGTTCACCAACCACGAGTCGCTCCC GGCGATGGAGGAGGCGTACGCCGAGTTCGTCGCCGCGTTCCCGCAGTACGCCGGGCTCGC CCAGGCCGACGCCATCAGGGACGGCGAGTACCAGCACCTCGACCGCCACGTGTGCCTCGA CTACACCGGCATCAACCTCTTCTCCCACGCGCAGATGAACTCGTCGGTGCCGTCGACGTC GGCCACGCCGCCGGCGTCGTCGTCGGGCGCGGCGTGGCAGCCGCCGTTCTTTGACATCGC GTACAAGTCCACGAGCCTGCGGTCGCAGGTGCAATGCGGGGACGACGTCGCGGCGGCGTC CGCGGCGGGCGGGATCGGCGGCGCCGTGACGAGGCGCGTCATGGCGTCGCTCAACATCCC CGACGACGAGTACGCCATGGTGTGCACGGCGAACCGGACCACCGCGTTCCGGCTGCTGGC GGAGTCCTACTCCTTCCAGCAGCACGGCAAGCGGCTGCTCACCGTGTACGACTACGAGAG CGAGGCGGCGGGCGCGATGGCGGAGAGCGCGCGCCGCCGCGGTGCGGAGGTGATGTCGGC GACGTTCGCGTGGCCGGGCATGCGCGTCCACGCCGCCGACCTCCGCAAGAAGCTGCTCCG CGGGAGGCGGCGCGGCGGCGGCGGCGGGCACCGGAGGGGGCTCTTCGTGTTCCCGCTGGT GTCGCGGATGACGGGGGCCAGGTACCCATACCTGTGGATGAGCGCGGCGCACGAACAAGG GTGGCACGTCGCGCTCGACGCGTGCGCGCTGGGCACCAAGGACCTCGACACGCTGGGCCT CTCCCTCCTCCGCCCGGACTTCATCGTCTGCAACTTCTTCAAGGTGTTCGGCGAGAACCC CTCCGGCTTCGCGGGCCTCTTCGTCAAGAAGTCCAGCCTCGCCGCGCTGGAGCGCTCCGT CATCGCCCGCAGCATCGGCATCGTCAGCATCGTCCCCGCACGCCGCTGGTCGCTCCACGA CGGCTACTCCACCGAGCTCGACCCGGTCGCCGCGGCGGCGGACGACCTCGACACCACCAG CTCCTTCTCCGGCCCACTCAGTGGCACCCTCATCGCGCTCACACTCAAGAACGTACCGGA GATGGACGCCGCAGGCGAGGAGAACGGCCACTCGCCGGAGATCCGCGAGGCCGATCCGCC GCCACCACCACCGCCAATAATGGAGGTGGAGTGCAGGGGGCTGGACCACGCGGACGCGCT GGGGCTGATCGCCATAGGCAACCGGCTGAGGTGCATCAGCAACTGGCTGGTGGTGGCGAT GCAGAAGCTGCGGCACCCGCAGTCGGAGCAGGGGAAGGCGCTGGTGCGGGTGTACGGGCC GCGGGTGAAGTTCGAGCGGGGGCCATCGCTGGCGTTCAACGTGTTCGACTGGAAGGGGGA GAAGGTGGCGCCGCCGCTGGTGCAGAAGCTCGCCGACCGCCACAACATCTCCCTCACCTG CGGCTTCCTCCGCCACATCTGCTTCTCCGACAAGTACGACGCCGACAGGGCCGCCGTCCT CGAGCACATCGACGGCGGCGGCAAGAGGAAGGACGCCGCCGGCGAGATGGGGATCTACGT GGTGAACGCGTCGCTGGGGTTCTTGACCAACTTCGACGACGCCTACAGGTTGTGGGCGTT CGTGGCCAAGTTCTTGGACGCCGATTTCGTGGAGAAGGAGCGGTGGAGGTACACCGCGCT CAACCAGAAGACGGTGGAGGTGTAGCCGACATGTCCATCCACCTTCAGCTTCCACCATTG GTACACTTCACTGTCACTGTCACTGTTCGCCATTCTTTTGGGATCAGCTCGATCGGCTGT GCAGAGCTGCTCCGTCCATTCTTTGTGTGAGAGAGGCTCGCTCCAGTGTGTTCATGATTA TACTGTAAAATGTAGTCTTTGCTTCCTTAGAAAAAAATATGTGCCTATTACTTGTTCGCT ATACTG