Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0544800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27296219:27297834:-1 gene:Os08g0544800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROLIFERATING CELL FACTOR 2, PROMOTER BINDING FACTOR2 description:PCF2. (Os08t0544800-01)
Sequence	ATGGAGGCGCAGGCGCAGGACAAGGCGGAGGAGGGGGAGGAGGAGGGCACGCGGCAGCAA CACGCGCAGGCTGGGCCGGTCGGTGCGGCTGGTGGTGGTGGTGGGGGGGGCGCGGCGGCT GTGGCGATGAGCGCCATCCCCATGAACAGCTGGCTCGTGCCCAAGCCCGAACCGGTGGAG TTCTTCGGCGGGATGGCCATGGTGCGCAAGCCGCCGCCGAGGAACCGGGACCGGCACACC AAGGTGGAGGGGCGCGGGAGGCGGATCCGCATGCCGGCGGCGTGCGCGGCCAGGATCTTC CAGCTCACGCGGGAGCTAGGGCACAAGTCCGACGGCGAGACCATCCGGTGGTTGCTGCAG CAGTCGGAGCCGGCAATCATCGCGGCCACCGGAACCGGCACCGTCCCGGCGATCGCGACC ACCGTCGATGGCGTGCTCCGCATCCCCACCCAGTCGTCGTCGTCCTCTGGCCCGGCGTCC TCCGCGGTGGTCGACGGTGAGGAGTCCTCGGCCAAGCGACGCCGCAAGCTGCAGCCCACG CGCGCGGTGGCTGGCGCGTCTCCGCTGGCCACGGCGGCGCCCGCGGCGTACTACCCGGTC ATCGCTGACCCTCTCCTGCAAGGTAGCGGCGGCGCGGCGATTTCAGTCCCGAGCGGCCTC GCTCCCATCACCGCCACCGGCGCTCCCCAAGGCCTCGTGCCCGTCTTCGCCGTCCCGGCC ACTGGCAGCCCCGCGGTCGCCGGCGGCAACCGCATGATCCCGCAAGCCACCGCCGTATGG ATGGTCCCGCAGCCCGCAGGCGCCGCGGGCGCGGGCAACCAACCCACGCAATTCTGGGCC ATCCAATCCGCGCCCCAGCTCGTGAACTTCGCCGGCGCGCAGTTCCCGACGGCGATTAAC GTCGCCGACTTCCAGCAGCAGCAACAACAGCAGCCGGTGTCAACAACCATCGTCCAGAAC AGCAACTCGGGCGAGCACATGCACTTCTCCGGCGCCGACTCCCACGAGCAGCAGCGGCGC GGGCGGAAGGAAGGCAACAGCGGCGGCGTGGTGGACCACCCGGAGGAGGACGAAGACGAC GACGACGACGAGCCGGTCTCCGACTCCAGCCCGGAAGAGTAG

Peptide Sequence

PEP ID	Os08t0544800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27296219:27297834:-1 gene:Os08g0544800 transcript:Os08t0544800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROLIFERATING CELL FACTOR 2, PROMOTER BINDING FACTOR2 description:PCF2. (Os08t0544800-01)
Sequence	MEAQAQDKAEEGEEEGTRQQHAQAGPVGAAGGGGGGGAAAVAMSAIPMNSWLVPKPEPVE FFGGMAMVRKPPPRNRDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSDGETIRWLLQ QSEPAIIAATGTGTVPAIATTVDGVLRIPTQSSSSSGPASSAVVDGEESSAKRRRKLQPT RAVAGASPLATAAPAAYYPVIADPLLQGSGGAAISVPSGLAPITATGAPQGLVPVFAVPA TGSPAVAGGNRMIPQATAVWMVPQPAGAAGAGNQPTQFWAIQSAPQLVNFAGAQFPTAIN VADFQQQQQQQPVSTTIVQNSNSGEHMHFSGADSHEQQRRGRKEGNSGGVVDHPEEDEDD DDDEPVSDSSPEE

Transcript Sequence

Transcript ID	Os08t0544800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27296219:27297834:-1 gene:Os08g0544800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PROLIFERATING CELL FACTOR 2, PROMOTER BINDING FACTOR2 description:PCF2. (Os08t0544800-01)
Sequence	AGCGAAGCGAAGCGAGTGAACACACACCTCTCCCCCCACCCTTTCCCGCAACACGCGAAA AGAGAGGCGAGGCGGAAACAAGCCCGGGCTTTTCCGTCTCGTCTCGTCTCCCTCCCAAAC CGAACCAATCCAATCTCTTCTCATCCATCCCCATGGAGGCGCAGGCGCAGGACAAGGCGG AGGAGGGGGAGGAGGAGGGCACGCGGCAGCAACACGCGCAGGCTGGGCCGGTCGGTGCGG CTGGTGGTGGTGGTGGGGGGGGCGCGGCGGCTGTGGCGATGAGCGCCATCCCCATGAACA GCTGGCTCGTGCCCAAGCCCGAACCGGTGGAGTTCTTCGGCGGGATGGCCATGGTGCGCA AGCCGCCGCCGAGGAACCGGGACCGGCACACCAAGGTGGAGGGGCGCGGGAGGCGGATCC GCATGCCGGCGGCGTGCGCGGCCAGGATCTTCCAGCTCACGCGGGAGCTAGGGCACAAGT CCGACGGCGAGACCATCCGGTGGTTGCTGCAGCAGTCGGAGCCGGCAATCATCGCGGCCA CCGGAACCGGCACCGTCCCGGCGATCGCGACCACCGTCGATGGCGTGCTCCGCATCCCCA CCCAGTCGTCGTCGTCCTCTGGCCCGGCGTCCTCCGCGGTGGTCGACGGTGAGGAGTCCT CGGCCAAGCGACGCCGCAAGCTGCAGCCCACGCGCGCGGTGGCTGGCGCGTCTCCGCTGG CCACGGCGGCGCCCGCGGCGTACTACCCGGTCATCGCTGACCCTCTCCTGCAAGGTAGCG GCGGCGCGGCGATTTCAGTCCCGAGCGGCCTCGCTCCCATCACCGCCACCGGCGCTCCCC AAGGCCTCGTGCCCGTCTTCGCCGTCCCGGCCACTGGCAGCCCCGCGGTCGCCGGCGGCA ACCGCATGATCCCGCAAGCCACCGCCGTATGGATGGTCCCGCAGCCCGCAGGCGCCGCGG GCGCGGGCAACCAACCCACGCAATTCTGGGCCATCCAATCCGCGCCCCAGCTCGTGAACT TCGCCGGCGCGCAGTTCCCGACGGCGATTAACGTCGCCGACTTCCAGCAGCAGCAACAAC AGCAGCCGGTGTCAACAACCATCGTCCAGAACAGCAACTCGGGCGAGCACATGCACTTCT CCGGCGCCGACTCCCACGAGCAGCAGCGGCGCGGGCGGAAGGAAGGCAACAGCGGCGGCG TGGTGGACCACCCGGAGGAGGACGAAGACGACGACGACGACGAGCCGGTCTCCGACTCCA GCCCGGAAGAGTAGCAAACACACACAGCACAACACAAAAAAAGCAAGCGAGGCGAGCACT CCACTGCACGCCAAAAAGTCCACAAGTCCCCCCCACACACAAAGCTTAGGTTCCTTTTTG CTCCGATTCAATTTCTCGATCGTTTCTTTCCCGCAATATTCCTCATCCTTGTCATGATGA ACTAGTAATTACTCCCGCGTGTTGTGCTGTGCTGTGCTGGTACTACTCCTTACTTTCCCG TCCTTAGCTCAGTGTTTAGTCTTAGAGAAGAAGAAGATGATGATGATTTAGCATGCAAAT GAGCAGTTGACAATTTGACATAAGATTAAGTCTAATCCAGTACTACTTGCTGTGAC