Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0544500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27277738:27290452:-1 gene:Os08g0544500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:less pronounced lobe epidermal cell3 description:NCK-associated protein 1 (NAP1)-like protein, Homolog of SCAR/WAVE complex components, Control of epidermal cell morphogenesis (Os08t0544500-01)
Sequence	ATGGCCCATGTTTCGTTCAAATCCAAGGAAGCTGACAGCATGTCCCGCTGGTCGAAGTAC CTTAGTACTGAAGAGTCACCCCCTTCAGCATCACTAAGCTGGAGGGCTATGGGTGTCGAT GGCCCTCAAGGTTCTGCAAGTGGCCAGAAACATCTTCAGATGGAGCCAGTTGTCCAACTG TCAAAGGTCGCTGAAGGATTGTTAGCCAAAATGTATAGGCTGAATAGCATCTTGGACTAT CCAGATCCAAATGCGCACACATTTTCAGAAGCATTTTGGAAAGCTGGTGTTATGCCAAAT TTCCCAAAAATTTGCATCACATTGTCAAAGAAATTTCCTGAACATCCTAACAAGCTGCAG CTTGAAAAAGTAGATAAGTTTGCTCTTGATGCGCTGAATGAAAACGCAGAAGGTTACATG CAAAACCTTGAGCAATGGATCACGTTGCTTCTTGATTTGCTGGAATTCCGTGAACAAGCT CTTCGACTTATTTTAGATCTGAGCAGCACAGTCATAACATTGCTGCCACATCAGAACTCT TTAATTCTTCATGCTTTTATGGATCTCTTTTGCTCTTTTGTGCGAGTTAACCTTTTCTCT GACAAGATACCAAGAAAGATGATCCTCCAAGTTTACAATATCTTGCATATCATGCTAAAG GGTGGCCGTGATTGTGAATTTTATCATCGATTGGTTCAGTTTGTGGACTTATATGATCCA CCAGTCAAGGGGTTGCATGAAGATCTAAATTTTGTGAGCCCACGTATTGGAGAGGTCCTG GAGGCTGTTGGCCCAATTATCTTTCTTTCAACTGATACAAAAAAGTTAAGAAATGAAGGG TTCCTCAGTCCATTTCATCCACGTTATCCTGACATCCTTACAAACTCTGCTCATCCTATG AGGGCCCAAGACCTGGCTAATGTAACATCATATCGTGAATGGGTTCTTCTTGGATATCTT GTTTGTCCAGATGAACTACTTCGAGTGACCAGTATAGATGTTGCAATGGTTGTTCTGAAA GAAAATTTAGTACTCTCCCTGTTCAGAGATGAGTACATCTTACTCCATGAGAACTATCAA CTCTATGTCCTTCCAAAAGTTTTAGAATCGAAGAGAATGGCTAAATCTGGACGTACTAAG CAAAAGGAAGCTGATCTGGAATACAATGTTGCAAAGCAGGTTGAGAAAATGTTAATGGAA GTACATGAACAAGCATTGGTGTCAGCTGATGCTCTACATCATGAAAGGAGAATTCTTCTG AAACAGGAAATTGGAAGGATGGTTTTGTTTTTCACAGATCAACCTAGTCTTCTTGCTCCT AATATTCAGATGGTCTTTTCTGCTCTTGCTTTGGCTCAATGTGAGGTGGTTTGGTACTTC CAGCATGTGGGGATTGCATCATCGAAATCTAGTCGAGGGAGAACAGTTGACATTGATGCG GCAGACCCAACTATTGGATTCCTATTAGATGGAATGGGCAAACTTTGTTGCCTGGTTCGT AAATATATAGCAGCAATAAAAGGTTATGCATTATCATACTTGTCATCTTGTGCTGGAAGA ATACGGTTCTTACTTGGTACTCCAGGCATGGTTGCTCTTGACCTAGATGCCACACTGAAG GGCCTGTTCCAGCAAGTCCTCCATTGTCTGGAAAACATTCCGAAACCTCAGGGGGAAAAT GTCCCTGCTATTACTTGTGACTTAACTGATTTGCGGAAGCACTGGCTATCCATCTTGATG ATTGTCACATCATCACGATCATCTGTAAATATTAGACATTTGGAGAAGGCTACTGTGTCT ACTGGGAAGGAGGGCCTGGTCTCAGAAGGCAATGCTGCTTACAATTGGTCTAGATGTGTG GATGAACTTGAGGGCCAGCTTTCCAAACATGGAAGCCTGAAAAAACTTTACTTCTACCAT CAGCATCTTACAACGGTCTTCAGAAACACAATGTTTGGTCCAGAAGGCCGTCCCCAACAT TGTTGTGCGTGGCTTGGAGCAGCTTGCTGCTTTCCAGAATGTGCTTCTTCCATTATTCCT GAAGAGGTCAACAAGATTGGCAGAGATTCTATCTCATATGTTGAGTCCCTTATCGAGTCT ATAATGGGTGGATTGGAAGGTTTGATAAATATTCTAGATTCAGAAGGTGGATTTGGTTCA TTAGAGATGCAGCTTTCGCCAGAGCAAGCAGCTATCCGATTGAATAATGCAACAAGAGCA AAAGCTGTTTCAGGCTTGTTAGCACCAGGGCATGAGAGCTATCCTGATAATAGTTCTTCA GTTAAGATGCTGGAAGCTGCTATGCAAAGGCTGACAAGTCTATGCTCTGTGCTAAATGAC ATGGAGCCTATTTGTGTTCTCAATCATGTTTTTATTCTCCGAGAGTACATGAGGGACTGC ATCATAGGTAATTTTAGGAGAAGATTTCACAGCATGATTAGAACTGATAGCTGCCTTCAA CGACCATCAGTCATAGAATCTCTTCTAAGAAGACACCTGAGCATCATCCATCTGGCAGAG CAGCATATCAGTATGGACCTTACTGAAGGTATACGGGAAGTGCTACTTGCAGAGAGTTTT ACTGGGCCATTTCCCAACCTGCAAGTATTTGAGACACCAACAGAAACACATGGAGGAGGA TCTGCCATAGACATAATATCTAATTGGTATATTGATAACTTCGTAAAGGATGCATCTCGC ACTGGAGTTGTTTTTGATGCATCTCAGAATTGCTTTAGGAGCTCACAGCCTATTGGTGGT GGATATTTAGCGGAAGCATTCACAGATAAAAGAGAACTCAAAGCACTTGTTCGTTTATTT GGTGGTTATGGAGTAGATAGGCTGGATAAGTTGTTAAGGGAACATACATCAGCTCTACTA AATTGCATTGACTCAGCGCTTAGGTCAAACCGCGATGCCTTAGAGGGCCTTGCTGGAAGT GTAAACTCTGGTGATAGGATTGAAAGAGATGCAAATCTAAAGCAGATAATTGACATCGAA ACATTGGCTGACTTCTGTATCCAGGCAGGTCAGGCAATAACTTTTCGCCGGTTGTTGGTA GAAGCTGTTGGAGCTGTTCTTGAAGAGAAAGTACCTCTCATATATTCTCTGCTCAAGGGA TTAGCTATGCAGTTGCCAGAAGAGGTACCTGATAAAAATGAGATCATTAGACTAAGAAGG GTTGCTAGCAGTGTTGGTGTCGGTGACAAACATGATGCCGAGTGGGTTCATTCTATTCTG GCAGAAATAGGTTCTGCTAATGATAATTCTTGGACCTTACTTCCATATCTTTGCGCTGCA TTTATGGCATCCAATATGTGGAGCACTACTGCTTATGATGTCAATACAGGTGGATTCAGT AACAATTTGCATTGCTTAGCAAGGTGTGTAAGTGCTGTGGTTGGAGGAAGTGAATACACT AGGATGGAAAGGGAACATCGGAGAAGTTCACTTTCAAATGGGCATATGGATGAGCTGCAA GAGCCTGAATTACTGAGCCGTGTCTCAGCTGAAGCAAATATTAAATCTGCTATGCAACTC TATGTCAAATTGTCTGCAGGGTTAGTCCTGGATTCATGGAATGACACTAGCAGGCCATAC ATTGTTCCAAAGCTAATATTCCTCGATCAACTCTGTGAGATGTCCCCCTACCTCCCAAGG AGCACCTTAGAAGTTCACATACCTTACACGATTCTGCGTTCAATCTACCATCAATTATAT GGAGCTTCACTGATGGCCACAGAACCAATGGAGCCATCCCCAAGGCAGTCCCCTCTGATA TCTCTGGCTCATGCATCACCATCAATGAAGCAAAATCGAGCAGACACAACGCCCAGGTCT CATACTTTCGAGCCTGGATACCACAGTTCATCTGGGTCCCAGTACGATGAAGGTTATGAA GGGGATAGAAGAACTGGAGAGAGGCAACTCCGAAGCATGAGGCGATCTGGGCCACTAGAT TACACTGGAACCAGGAAAGTGAAGTTTGTGGAGGGTTCAAGTTCTGGAAGCCATGGGGCT GGCTCAGGCTCACTACAGAGATTTGCTGTGTCAAGATCTGGCCCCCTATCCTACAAATAA

Peptide Sequence

PEP ID	Os08t0544500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27277738:27290452:-1 gene:Os08g0544500 transcript:Os08t0544500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:less pronounced lobe epidermal cell3 description:NCK-associated protein 1 (NAP1)-like protein, Homolog of SCAR/WAVE complex components, Control of epidermal cell morphogenesis (Os08t0544500-01)
Sequence	MAHVSFKSKEADSMSRWSKYLSTEESPPSASLSWRAMGVDGPQGSASGQKHLQMEPVVQL SKVAEGLLAKMYRLNSILDYPDPNAHTFSEAFWKAGVMPNFPKICITLSKKFPEHPNKLQ LEKVDKFALDALNENAEGYMQNLEQWITLLLDLLEFREQALRLILDLSSTVITLLPHQNS LILHAFMDLFCSFVRVNLFSDKIPRKMILQVYNILHIMLKGGRDCEFYHRLVQFVDLYDP PVKGLHEDLNFVSPRIGEVLEAVGPIIFLSTDTKKLRNEGFLSPFHPRYPDILTNSAHPM RAQDLANVTSYREWVLLGYLVCPDELLRVTSIDVAMVVLKENLVLSLFRDEYILLHENYQ LYVLPKVLESKRMAKSGRTKQKEADLEYNVAKQVEKMLMEVHEQALVSADALHHERRILL KQEIGRMVLFFTDQPSLLAPNIQMVFSALALAQCEVVWYFQHVGIASSKSSRGRTVDIDA ADPTIGFLLDGMGKLCCLVRKYIAAIKGYALSYLSSCAGRIRFLLGTPGMVALDLDATLK GLFQQVLHCLENIPKPQGENVPAITCDLTDLRKHWLSILMIVTSSRSSVNIRHLEKATVS TGKEGLVSEGNAAYNWSRCVDELEGQLSKHGSLKKLYFYHQHLTTVFRNTMFGPEGRPQH CCAWLGAACCFPECASSIIPEEVNKIGRDSISYVESLIESIMGGLEGLINILDSEGGFGS LEMQLSPEQAAIRLNNATRAKAVSGLLAPGHESYPDNSSSVKMLEAAMQRLTSLCSVLND MEPICVLNHVFILREYMRDCIIGNFRRRFHSMIRTDSCLQRPSVIESLLRRHLSIIHLAE QHISMDLTEGIREVLLAESFTGPFPNLQVFETPTETHGGGSAIDIISNWYIDNFVKDASR TGVVFDASQNCFRSSQPIGGGYLAEAFTDKRELKALVRLFGGYGVDRLDKLLREHTSALL NCIDSALRSNRDALEGLAGSVNSGDRIERDANLKQIIDIETLADFCIQAGQAITFRRLLV EAVGAVLEEKVPLIYSLLKGLAMQLPEEVPDKNEIIRLRRVASSVGVGDKHDAEWVHSIL AEIGSANDNSWTLLPYLCAAFMASNMWSTTAYDVNTGGFSNNLHCLARCVSAVVGGSEYT RMEREHRRSSLSNGHMDELQEPELLSRVSAEANIKSAMQLYVKLSAGLVLDSWNDTSRPY IVPKLIFLDQLCEMSPYLPRSTLEVHIPYTILRSIYHQLYGASLMATEPMEPSPRQSPLI SLAHASPSMKQNRADTTPRSHTFEPGYHSSSGSQYDEGYEGDRRTGERQLRSMRRSGPLD YTGTRKVKFVEGSSSGSHGAGSGSLQRFAVSRSGPLSYK

Transcript Sequence

Transcript ID	Os08t0544500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27277738:27290452:-1 gene:Os08g0544500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:less pronounced lobe epidermal cell3 description:NCK-associated protein 1 (NAP1)-like protein, Homolog of SCAR/WAVE complex components, Control of epidermal cell morphogenesis (Os08t0544500-01)
Sequence	AGCGAGATCTCGCCGCGGCTGAAAGCTACGGGCCTACCACTACTACCTGCGTGCGTGCGG TGCGTCCCCCATAGTTGTTCTGTACTCAAAACATGGCCCATGTTTCGTTCAAATCCAAGG AAGCTGACAGCATGTCCCGCTGGTCGAAGTACCTTAGTACTGAAGAGTCACCCCCTTCAG CATCACTAAGCTGGAGGGCTATGGGTGTCGATGGCCCTCAAGGTTCTGCAAGTGGCCAGA AACATCTTCAGATGGAGCCAGTTGTCCAACTGTCAAAGGTCGCTGAAGGATTGTTAGCCA AAATGTATAGGCTGAATAGCATCTTGGACTATCCAGATCCAAATGCGCACACATTTTCAG AAGCATTTTGGAAAGCTGGTGTTATGCCAAATTTCCCAAAAATTTGCATCACATTGTCAA AGAAATTTCCTGAACATCCTAACAAGCTGCAGCTTGAAAAAGTAGATAAGTTTGCTCTTG ATGCGCTGAATGAAAACGCAGAAGGTTACATGCAAAACCTTGAGCAATGGATCACGTTGC TTCTTGATTTGCTGGAATTCCGTGAACAAGCTCTTCGACTTATTTTAGATCTGAGCAGCA CAGTCATAACATTGCTGCCACATCAGAACTCTTTAATTCTTCATGCTTTTATGGATCTCT TTTGCTCTTTTGTGCGAGTTAACCTTTTCTCTGACAAGATACCAAGAAAGATGATCCTCC AAGTTTACAATATCTTGCATATCATGCTAAAGGGTGGCCGTGATTGTGAATTTTATCATC GATTGGTTCAGTTTGTGGACTTATATGATCCACCAGTCAAGGGGTTGCATGAAGATCTAA ATTTTGTGAGCCCACGTATTGGAGAGGTCCTGGAGGCTGTTGGCCCAATTATCTTTCTTT CAACTGATACAAAAAAGTTAAGAAATGAAGGGTTCCTCAGTCCATTTCATCCACGTTATC CTGACATCCTTACAAACTCTGCTCATCCTATGAGGGCCCAAGACCTGGCTAATGTAACAT CATATCGTGAATGGGTTCTTCTTGGATATCTTGTTTGTCCAGATGAACTACTTCGAGTGA CCAGTATAGATGTTGCAATGGTTGTTCTGAAAGAAAATTTAGTACTCTCCCTGTTCAGAG ATGAGTACATCTTACTCCATGAGAACTATCAACTCTATGTCCTTCCAAAAGTTTTAGAAT CGAAGAGAATGGCTAAATCTGGACGTACTAAGCAAAAGGAAGCTGATCTGGAATACAATG TTGCAAAGCAGGTTGAGAAAATGTTAATGGAAGTACATGAACAAGCATTGGTGTCAGCTG ATGCTCTACATCATGAAAGGAGAATTCTTCTGAAACAGGAAATTGGAAGGATGGTTTTGT TTTTCACAGATCAACCTAGTCTTCTTGCTCCTAATATTCAGATGGTCTTTTCTGCTCTTG CTTTGGCTCAATGTGAGGTGGTTTGGTACTTCCAGCATGTGGGGATTGCATCATCGAAAT CTAGTCGAGGGAGAACAGTTGACATTGATGCGGCAGACCCAACTATTGGATTCCTATTAG ATGGAATGGGCAAACTTTGTTGCCTGGTTCGTAAATATATAGCAGCAATAAAAGGTTATG CATTATCATACTTGTCATCTTGTGCTGGAAGAATACGGTTCTTACTTGGTACTCCAGGCA TGGTTGCTCTTGACCTAGATGCCACACTGAAGGGCCTGTTCCAGCAAGTCCTCCATTGTC TGGAAAACATTCCGAAACCTCAGGGGGAAAATGTCCCTGCTATTACTTGTGACTTAACTG ATTTGCGGAAGCACTGGCTATCCATCTTGATGATTGTCACATCATCACGATCATCTGTAA ATATTAGACATTTGGAGAAGGCTACTGTGTCTACTGGGAAGGAGGGCCTGGTCTCAGAAG GCAATGCTGCTTACAATTGGTCTAGATGTGTGGATGAACTTGAGGGCCAGCTTTCCAAAC ATGGAAGCCTGAAAAAACTTTACTTCTACCATCAGCATCTTACAACGGTCTTCAGAAACA CAATGTTTGGTCCAGAAGGCCGTCCCCAACATTGTTGTGCGTGGCTTGGAGCAGCTTGCT GCTTTCCAGAATGTGCTTCTTCCATTATTCCTGAAGAGGTCAACAAGATTGGCAGAGATT CTATCTCATATGTTGAGTCCCTTATCGAGTCTATAATGGGTGGATTGGAAGGTTTGATAA ATATTCTAGATTCAGAAGGTGGATTTGGTTCATTAGAGATGCAGCTTTCGCCAGAGCAAG CAGCTATCCGATTGAATAATGCAACAAGAGCAAAAGCTGTTTCAGGCTTGTTAGCACCAG GGCATGAGAGCTATCCTGATAATAGTTCTTCAGTTAAGATGCTGGAAGCTGCTATGCAAA GGCTGACAAGTCTATGCTCTGTGCTAAATGACATGGAGCCTATTTGTGTTCTCAATCATG TTTTTATTCTCCGAGAGTACATGAGGGACTGCATCATAGGTAATTTTAGGAGAAGATTTC ACAGCATGATTAGAACTGATAGCTGCCTTCAACGACCATCAGTCATAGAATCTCTTCTAA GAAGACACCTGAGCATCATCCATCTGGCAGAGCAGCATATCAGTATGGACCTTACTGAAG GTATACGGGAAGTGCTACTTGCAGAGAGTTTTACTGGGCCATTTCCCAACCTGCAAGTAT TTGAGACACCAACAGAAACACATGGAGGAGGATCTGCCATAGACATAATATCTAATTGGT ATATTGATAACTTCGTAAAGGATGCATCTCGCACTGGAGTTGTTTTTGATGCATCTCAGA ATTGCTTTAGGAGCTCACAGCCTATTGGTGGTGGATATTTAGCGGAAGCATTCACAGATA AAAGAGAACTCAAAGCACTTGTTCGTTTATTTGGTGGTTATGGAGTAGATAGGCTGGATA AGTTGTTAAGGGAACATACATCAGCTCTACTAAATTGCATTGACTCAGCGCTTAGGTCAA ACCGCGATGCCTTAGAGGGCCTTGCTGGAAGTGTAAACTCTGGTGATAGGATTGAAAGAG ATGCAAATCTAAAGCAGATAATTGACATCGAAACATTGGCTGACTTCTGTATCCAGGCAG GTCAGGCAATAACTTTTCGCCGGTTGTTGGTAGAAGCTGTTGGAGCTGTTCTTGAAGAGA AAGTACCTCTCATATATTCTCTGCTCAAGGGATTAGCTATGCAGTTGCCAGAAGAGGTAC CTGATAAAAATGAGATCATTAGACTAAGAAGGGTTGCTAGCAGTGTTGGTGTCGGTGACA AACATGATGCCGAGTGGGTTCATTCTATTCTGGCAGAAATAGGTTCTGCTAATGATAATT CTTGGACCTTACTTCCATATCTTTGCGCTGCATTTATGGCATCCAATATGTGGAGCACTA CTGCTTATGATGTCAATACAGGTGGATTCAGTAACAATTTGCATTGCTTAGCAAGGTGTG TAAGTGCTGTGGTTGGAGGAAGTGAATACACTAGGATGGAAAGGGAACATCGGAGAAGTT CACTTTCAAATGGGCATATGGATGAGCTGCAAGAGCCTGAATTACTGAGCCGTGTCTCAG CTGAAGCAAATATTAAATCTGCTATGCAACTCTATGTCAAATTGTCTGCAGGGTTAGTCC TGGATTCATGGAATGACACTAGCAGGCCATACATTGTTCCAAAGCTAATATTCCTCGATC AACTCTGTGAGATGTCCCCCTACCTCCCAAGGAGCACCTTAGAAGTTCACATACCTTACA CGATTCTGCGTTCAATCTACCATCAATTATATGGAGCTTCACTGATGGCCACAGAACCAA TGGAGCCATCCCCAAGGCAGTCCCCTCTGATATCTCTGGCTCATGCATCACCATCAATGA AGCAAAATCGAGCAGACACAACGCCCAGGTCTCATACTTTCGAGCCTGGATACCACAGTT CATCTGGGTCCCAGTACGATGAAGGTTATGAAGGGGATAGAAGAACTGGAGAGAGGCAAC TCCGAAGCATGAGGCGATCTGGGCCACTAGATTACACTGGAACCAGGAAAGTGAAGTTTG TGGAGGGTTCAAGTTCTGGAAGCCATGGGGCTGGCTCAGGCTCACTACAGAGATTTGCTG TGTCAAGATCTGGCCCCCTATCCTACAAATAAGATCATGTTAACAAGTAACAACAGCATT CTACTGGCAATCATAGTTTGCCAGCATCAGTATCTAGCAATTTGTATTTGAGTGGACTCC AGTCAATGCTCCCATTCGTCTTTGTAGAGCATCTGAGCATATATGTTATTTAGCTCCTTT GCGTGAAGTAATATGTATTCTAGCTGTATTTACGTACCTAGTGCTCTTGTAAGTCTATAT GTATGGTACCTATTGCTCTTGTAAGTAAACCCTCCTCTGTTGCTACATGAATTAGCAATG TGCTAGTTGTATGTCTGTTAATGTAAATGGATTGTATAATTGCCTTCTATCCCAGATGTA ACGAACGACC