Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0543100-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:27181693:27185268:-1 gene:Os08g0543100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR type resistance protein (Fragment). (Os08t0543100-00)
Sequence	ATGGCAGAATCGCTGCTCCTCCCGGTGGTGCGCGGGGTGGTCGGCAAGGCGGCCGGCGCG CTCGTCCAGAGCGTCACTCGCATGTGCGGCGTCGACGGCGATCGCCACAAGCTGGAGCGC CAGCTTCTGGCCGTCCAGTGCAAGCTGTCCGACGCCGAGGCGAAGAGCGAGACCAGCCCC GCCGTGAAGAGGTGGATGAAGGACCTCAAGGCCGTCGCGTACGAGGCCGACGACGTCCTC GACGACTTCCACTACGAGGCACTGCGCCGCGACGCCCAGATCGGCGACTCCACCACCGAC AAGGTACTCGGCTACTTCACGCCGCACAGCCCCCTCCTGTTCCGTGTTGCCATGAGCAAG AAGCTGAACAGTGTCCTCAAGAAGATCAACGAGCTGGTTGAAGAGATGAACAAGTTTGGC CTAGTGGAGCGTGCAGATCAGGCAACAGTACATGTGATCCATCCTCAGACGCACTCCGGC CTCGATAGCTTGATGGAGATCGTTGGCAGAGACGACGACAAGGAGATGGTGGTGAATTTG TTACTTGAGCAGCGATCCAAGCGGATGGTTGAGGTGCTATCAATCGTAGGGATGGGGGGA TTGGGCAAGACCACACTTGCGAAGATGGTGTACAACGACACAAGGGTTCAACAACGCTTT GAGTTGCCCATGTGGCTCTGTGTCTCAGATGATTTCAATGTTGTTTCTCTAGTCAGATCC ATTATTGAATTGGCTACCAGGGGAAATTGCACCTTGCCAGACAGAATCGAACTATTGCGC AGCCGTCTACATGAGGTGGTAGGCCGCAAAAGGTATCTACTTGTTCTTGATGATGTTTGG AATGAGGAGGAACATAAATGGGAGGAGCTGAGGCCATTGCTGCATTCTGCTGGTGCTCCA GGAAGTGTAGTACTTGTCACAACTCGGAGCCAGCGGGTAGCATCCATAATGGGCACAGTT CCTGCTCACACGCTATCATACCTAAACCATGATGATTCATGGGAATTATTCCGGAAGAAA GCATTCAGTAAAGAAGAGGAGCAGCAGCCAGAGTTTGCAGAGATTGGCAATCGTATTGTC AAGAAGTGCAAAGGGTTACCTCTTGCTCTGAAGACAATGGGAGGCCTTATGAGTTCCAAG AAGCGAATCCAGGAATGGGAAGCTATTGCAGGAAGCAAGAGTTGGGAGGATGTTGGGACT ACAAATGAGATCCTATCCATACTAAAACTGAGCTATAGGCACTTACCACTTGAAATGAAG CAATGTTTTGCCTTTTGCGCAATCTTCCCAAAGGACTACCAGATGGAGAGGGACAAGTTG GTCCAGCTCTGGATAGCGAATAATTTCATCCAAGAGGAGGGGATGATGGATTTGGAAGAG AGAGGACAGTTTGTTTTCAATGAGCTAGTGTGGAGGTCCTTCTTCCAAGATGTAAAGGTA GAAAGTTTTCATGTCGGGATTAAACAGACTTACAAGTCAATTACATGCTACATGCATGAT CTAATGCATGATCTAGCAAAATCTGTCACAGAGGAATGTGTTGATGCGCAAGACCTGAAC CAGCAAAAAGCCTCGATGAAAGATGTCCGCCATCTGATGTCAAGTGCCAAGTTGCAAGAG AACAGTGAATTATTTAAACATGTGGGACCTCTTCACACATTATTGTCACCATATTGGTCA AAATCATCACCACTACCCAGAAATATCAAGAGATTAAACTTGACGTCTTTACGAGCATTG CATAATGATAAATTGAATGTTTCTCCAAAGGCATTAGCAAGTATAACACACTTACGATAC CTTGATCTTTCTCATTCTAGTAAGCTAGAACATTTACCTGATTCAATATGTATGTTATAC AGCTTGCAAGCTTTGAGGTTAAATGGTTGCTTGAAACTTCAGCATTTACCAGAGGGTATG AGATTTATGAGCAAGCTCAGGCACCTTTATCTTATTGGTTGTCATAGCTTGAAACGCATG CCACCAAGAATTGGTCAGCTAAAGAACCTCCGGACTCTTACCACATTTGTTGTGGATACC AAAGATGGATGTGGGCTTGAAGAACTGAAAGACTTGCATCATCTAGGTGGCCGACTAGAA CTGTTTAATCTGAAAGCTATACAAAGTGGGTCAAATGCAAGAGAAGCCAATCTCCATATC CAAGAAAATGTAACTGAGTTGTTGTTGCACTGGTGTCATGATATATTCGAGTACAGTGAC CATGACTTTGATCTCGATGTTGTTGACAACAAAAAGGAGATCGTAGAGTTCTCTTTACCT CCTAGCAGACTTGAAACATTGCAGGTATGGGGCTCTGGTCATATTGAAATGTCATCATGG ATGAAAAACCCCGCAATTTTCCTATGCCTAAAAGAACTCCACATGTCTGAGTGCTGGAGA TGTAAGGATCTACCACCGTTATGGCAGTCTGTCTCTCTTGAGTCCCTGTCTTTATCCCGT TTGGATAATTTGACCACATTATCTAGTGGCATTGACATGGCTGTTCCAGGATGCAATGGT TCCCTGGAAATTTTTCCAAAGCTGAAGAAGATGCATTTACATTACTTACCTAACTTGGAG AAATGGATGGACAATGAAGTAACATCGGTGATGTTCCCTGAGCTCAAAGAATTAAAAATT TACAATTGTCCAAAGCTAGTGAATATTCCAAAAGCTCCTATCCTACGAGAGCTGGATATA TTCCAGTGCAGAATTGCACTGAACTCACTCAGCCATCTTGCAGCACTTTCCCAACTCAAC TATGTTGGTGACTGGAGTGTTTCTAAGGATTTGCAGGTAATACCAATACGCTCCTGGCCA TCTCTTGTGACATTAGCGCTAGCCTCTTTAGGGAACTCGCTTCTCCCAGATGAGCAGCAG ACGACCATGCCCCCTCTGGAATCAATTCAGAAGCTGAGCATTTGGTATTCTAGTTGTTTC TTCTCACCTAATTCGTCAAACTGGCCCTTTGGTTTCTGGGATTGCTTTGCATTTGTGGAA GAATTGTCGATAGTATTATGCGACGATCTTGTCCATTGGCCTGTGAAGGAGCTCTGTGGC TTGAATTCCCTTCGTTGTGTAAGATTTAGTTATTGCAAGAATCTGACCAGTTCATCATCA GAAGAATCCTTATTCCCGTCTGGTCTGGAAAAGTTGTACATAGAATTTTGCAATAACTTA TTAGAGATTCCCAAGCTCCCTGCTTCACTGGAGACACTACGCATTAATGAATGCACTTCT TTGGTGTCTCTGCCACCAAATCTTGCAAGACTTGCCAAGTTGAGAGATCTCACATTATTT TCTTGCTCAAGTCTGAGAAATTTGCCTGATGTTATGGATGGCCTCACTGGTCTTCAGGAA CTATGTGTTCGGCAGTGCCCTGGGGTAGAGACACTGCCACAGAGTCTTCTTCAGCGACTG CCAAACCTCAGGAAGCTAATGACACTAGGAAGCCACAAGTTAGATAAGCGATGCAGAAGA GGAGGGGAGTACTGGGAGTATGTCTCTAATATTCCATGTCTGAACAGAGACTTCATAGAA GAAAGACCCTGTTAA

Peptide Sequence

PEP ID	Os08t0543100-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:27181693:27185268:-1 gene:Os08g0543100 transcript:Os08t0543100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR type resistance protein (Fragment). (Os08t0543100-00)
Sequence	MAESLLLPVVRGVVGKAAGALVQSVTRMCGVDGDRHKLERQLLAVQCKLSDAEAKSETSP AVKRWMKDLKAVAYEADDVLDDFHYEALRRDAQIGDSTTDKVLGYFTPHSPLLFRVAMSK KLNSVLKKINELVEEMNKFGLVERADQATVHVIHPQTHSGLDSLMEIVGRDDDKEMVVNL LLEQRSKRMVEVLSIVGMGGLGKTTLAKMVYNDTRVQQRFELPMWLCVSDDFNVVSLVRS IIELATRGNCTLPDRIELLRSRLHEVVGRKRYLLVLDDVWNEEEHKWEELRPLLHSAGAP GSVVLVTTRSQRVASIMGTVPAHTLSYLNHDDSWELFRKKAFSKEEEQQPEFAEIGNRIV KKCKGLPLALKTMGGLMSSKKRIQEWEAIAGSKSWEDVGTTNEILSILKLSYRHLPLEMK QCFAFCAIFPKDYQMERDKLVQLWIANNFIQEEGMMDLEERGQFVFNELVWRSFFQDVKV ESFHVGIKQTYKSITCYMHDLMHDLAKSVTEECVDAQDLNQQKASMKDVRHLMSSAKLQE NSELFKHVGPLHTLLSPYWSKSSPLPRNIKRLNLTSLRALHNDKLNVSPKALASITHLRY LDLSHSSKLEHLPDSICMLYSLQALRLNGCLKLQHLPEGMRFMSKLRHLYLIGCHSLKRM PPRIGQLKNLRTLTTFVVDTKDGCGLEELKDLHHLGGRLELFNLKAIQSGSNAREANLHI QENVTELLLHWCHDIFEYSDHDFDLDVVDNKKEIVEFSLPPSRLETLQVWGSGHIEMSSW MKNPAIFLCLKELHMSECWRCKDLPPLWQSVSLESLSLSRLDNLTTLSSGIDMAVPGCNG SLEIFPKLKKMHLHYLPNLEKWMDNEVTSVMFPELKELKIYNCPKLVNIPKAPILRELDI FQCRIALNSLSHLAALSQLNYVGDWSVSKDLQVIPIRSWPSLVTLALASLGNSLLPDEQQ TTMPPLESIQKLSIWYSSCFFSPNSSNWPFGFWDCFAFVEELSIVLCDDLVHWPVKELCG LNSLRCVRFSYCKNLTSSSSEESLFPSGLEKLYIEFCNNLLEIPKLPASLETLRINECTS LVSLPPNLARLAKLRDLTLFSCSSLRNLPDVMDGLTGLQELCVRQCPGVETLPQSLLQRL PNLRKLMTLGSHKLDKRCRRGGEYWEYVSNIPCLNRDFIEERPC

Transcript Sequence

Transcript ID	Os08t0543100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27181693:27185268:-1 gene:Os08g0543100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR type resistance protein (Fragment). (Os08t0543100-00)
Sequence	GAGCTGAGTAGTGGTAGAAGCATGGCAGAATCGCTGCTCCTCCCGGTGGTGCGCGGGGTG GTCGGCAAGGCGGCCGGCGCGCTCGTCCAGAGCGTCACTCGCATGTGCGGCGTCGACGGC GATCGCCACAAGCTGGAGCGCCAGCTTCTGGCCGTCCAGTGCAAGCTGTCCGACGCCGAG GCGAAGAGCGAGACCAGCCCCGCCGTGAAGAGGTGGATGAAGGACCTCAAGGCCGTCGCG TACGAGGCCGACGACGTCCTCGACGACTTCCACTACGAGGCACTGCGCCGCGACGCCCAG ATCGGCGACTCCACCACCGACAAGGTACTCGGCTACTTCACGCCGCACAGCCCCCTCCTG TTCCGTGTTGCCATGAGCAAGAAGCTGAACAGTGTCCTCAAGAAGATCAACGAGCTGGTT GAAGAGATGAACAAGTTTGGCCTAGTGGAGCGTGCAGATCAGGCAACAGTACATGTGATC CATCCTCAGACGCACTCCGGCCTCGATAGCTTGATGGAGATCGTTGGCAGAGACGACGAC AAGGAGATGGTGGTGAATTTGTTACTTGAGCAGCGATCCAAGCGGATGGTTGAGGTGCTA TCAATCGTAGGGATGGGGGGATTGGGCAAGACCACACTTGCGAAGATGGTGTACAACGAC ACAAGGGTTCAACAACGCTTTGAGTTGCCCATGTGGCTCTGTGTCTCAGATGATTTCAAT GTTGTTTCTCTAGTCAGATCCATTATTGAATTGGCTACCAGGGGAAATTGCACCTTGCCA GACAGAATCGAACTATTGCGCAGCCGTCTACATGAGGTGGTAGGCCGCAAAAGGTATCTA CTTGTTCTTGATGATGTTTGGAATGAGGAGGAACATAAATGGGAGGAGCTGAGGCCATTG CTGCATTCTGCTGGTGCTCCAGGAAGTGTAGTACTTGTCACAACTCGGAGCCAGCGGGTA GCATCCATAATGGGCACAGTTCCTGCTCACACGCTATCATACCTAAACCATGATGATTCA TGGGAATTATTCCGGAAGAAAGCATTCAGTAAAGAAGAGGAGCAGCAGCCAGAGTTTGCA GAGATTGGCAATCGTATTGTCAAGAAGTGCAAAGGGTTACCTCTTGCTCTGAAGACAATG GGAGGCCTTATGAGTTCCAAGAAGCGAATCCAGGAATGGGAAGCTATTGCAGGAAGCAAG AGTTGGGAGGATGTTGGGACTACAAATGAGATCCTATCCATACTAAAACTGAGCTATAGG CACTTACCACTTGAAATGAAGCAATGTTTTGCCTTTTGCGCAATCTTCCCAAAGGACTAC CAGATGGAGAGGGACAAGTTGGTCCAGCTCTGGATAGCGAATAATTTCATCCAAGAGGAG GGGATGATGGATTTGGAAGAGAGAGGACAGTTTGTTTTCAATGAGCTAGTGTGGAGGTCC TTCTTCCAAGATGTAAAGGTAGAAAGTTTTCATGTCGGGATTAAACAGACTTACAAGTCA ATTACATGCTACATGCATGATCTAATGCATGATCTAGCAAAATCTGTCACAGAGGAATGT GTTGATGCGCAAGACCTGAACCAGCAAAAAGCCTCGATGAAAGATGTCCGCCATCTGATG TCAAGTGCCAAGTTGCAAGAGAACAGTGAATTATTTAAACATGTGGGACCTCTTCACACA TTATTGTCACCATATTGGTCAAAATCATCACCACTACCCAGAAATATCAAGAGATTAAAC TTGACGTCTTTACGAGCATTGCATAATGATAAATTGAATGTTTCTCCAAAGGCATTAGCA AGTATAACACACTTACGATACCTTGATCTTTCTCATTCTAGTAAGCTAGAACATTTACCT GATTCAATATGTATGTTATACAGCTTGCAAGCTTTGAGGTTAAATGGTTGCTTGAAACTT CAGCATTTACCAGAGGGTATGAGATTTATGAGCAAGCTCAGGCACCTTTATCTTATTGGT TGTCATAGCTTGAAACGCATGCCACCAAGAATTGGTCAGCTAAAGAACCTCCGGACTCTT ACCACATTTGTTGTGGATACCAAAGATGGATGTGGGCTTGAAGAACTGAAAGACTTGCAT CATCTAGGTGGCCGACTAGAACTGTTTAATCTGAAAGCTATACAAAGTGGGTCAAATGCA AGAGAAGCCAATCTCCATATCCAAGAAAATGTAACTGAGTTGTTGTTGCACTGGTGTCAT GATATATTCGAGTACAGTGACCATGACTTTGATCTCGATGTTGTTGACAACAAAAAGGAG ATCGTAGAGTTCTCTTTACCTCCTAGCAGACTTGAAACATTGCAGGTATGGGGCTCTGGT CATATTGAAATGTCATCATGGATGAAAAACCCCGCAATTTTCCTATGCCTAAAAGAACTC CACATGTCTGAGTGCTGGAGATGTAAGGATCTACCACCGTTATGGCAGTCTGTCTCTCTT GAGTCCCTGTCTTTATCCCGTTTGGATAATTTGACCACATTATCTAGTGGCATTGACATG GCTGTTCCAGGATGCAATGGTTCCCTGGAAATTTTTCCAAAGCTGAAGAAGATGCATTTA CATTACTTACCTAACTTGGAGAAATGGATGGACAATGAAGTAACATCGGTGATGTTCCCT GAGCTCAAAGAATTAAAAATTTACAATTGTCCAAAGCTAGTGAATATTCCAAAAGCTCCT ATCCTACGAGAGCTGGATATATTCCAGTGCAGAATTGCACTGAACTCACTCAGCCATCTT GCAGCACTTTCCCAACTCAACTATGTTGGTGACTGGAGTGTTTCTAAGGATTTGCAGGTA ATACCAATACGCTCCTGGCCATCTCTTGTGACATTAGCGCTAGCCTCTTTAGGGAACTCG CTTCTCCCAGATGAGCAGCAGACGACCATGCCCCCTCTGGAATCAATTCAGAAGCTGAGC ATTTGGTATTCTAGTTGTTTCTTCTCACCTAATTCGTCAAACTGGCCCTTTGGTTTCTGG GATTGCTTTGCATTTGTGGAAGAATTGTCGATAGTATTATGCGACGATCTTGTCCATTGG CCTGTGAAGGAGCTCTGTGGCTTGAATTCCCTTCGTTGTGTAAGATTTAGTTATTGCAAG AATCTGACCAGTTCATCATCAGAAGAATCCTTATTCCCGTCTGGTCTGGAAAAGTTGTAC ATAGAATTTTGCAATAACTTATTAGAGATTCCCAAGCTCCCTGCTTCACTGGAGACACTA CGCATTAATGAATGCACTTCTTTGGTGTCTCTGCCACCAAATCTTGCAAGACTTGCCAAG TTGAGAGATCTCACATTATTTTCTTGCTCAAGTCTGAGAAATTTGCCTGATGTTATGGAT GGCCTCACTGGTCTTCAGGAACTATGTGTTCGGCAGTGCCCTGGGGTAGAGACACTGCCA CAGAGTCTTCTTCAGCGACTGCCAAACCTCAGGAAGCTAATGACACTAGGAAGCCACAAG TTAGATAAGCGATGCAGAAGAGGAGGGGAGTACTGGGAGTATGTCTCTAATATTCCATGT CTGAACAGAGACTTCATAGAAGAAAGACCCTGTTAA