Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0543050-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:27175631:27179263:-1 gene:Os08g0543050 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog PIC27 description:Similar to NBS2-RDG2A. (Os08t0543050-00)
Sequence	ATGGCGGAATCGCTAATCCTCCCCATGGTGCGCGGGGTGGCGGCGAAGGCCGCCGATGCA CTCGTACAGAGAGTCACCGGCGCGTGCGGCGCCGTCGACGACGACCGCCGCAAGCTGCAA CGCCAGCTGCTGGCCGTCCAGCGCGCGCTGGCCGACGCCGAGGCGAAGAGCGAGACCAAC CTCGCCGTCAGGCGCTGGATGAAGGACCTCAACGCCGCCGCCTACGAGGCCGACGACGTC CTCGACGACTTCCGCTACGAGGCGCTGCGCCGCGACGGCGACGCCACCGCCGGCAAGGTA CTCGGCTACTTCACCCCGCACAACCCACTCCTGTTCCGCGTAACCATGAGCAAGAAGCTG AGCAATGTCCTCGAGAAGATGAACAAGCTGGTTGACAAGATGAACGAGCTTGGCTTGTCA GTGGATCGCACAGAATCACCACAAGAACTGAAACCTCCTTATCTCCAGATGCATTCTGCT GCACTGGATGAATCAAGTGACATTGTTGGCAGAGACGACGACAAGGAGGTGGTGGTTAAG CTGTTGCTGGATCAGCGATATGAGCAGAGATTGCAGGTTCTCCCTGTCATCGGGATCGGG GGTTCAGGCAAGACGACGCTCGCCAAGATGGTGTACAACGACACGAGGGTACGTGACCAT TTCCAGCTGAAGATGTGGCACTGTGTTTCAGAGAATTTTGAAGCTGTTCCCCTTCTGAAA TCCATCGTTGAATTGGCTACAAATCGAAGATGTCAAGTGCCTGACAAGGACACCATCGAG CTCTTGCGACGGCAGCTTGAGGGAGCCATTGGTAGCAGAAGGTTTCTGTTAGTTCTTGAC GATGTATGGAACGAGGATGAGAACAAGTGGAAGGATGAACTAAGGCCACTCTTGTGCTCT GCTGCTGGTGGTCATGGAAGTGTTGTAGTGGTCACAACTCGGAGCCAACAAGTAGCATCT ATCATGGGCACCATGAGATCCCATGAACTAGCATGTCTGAATGATGATGATTCATGGGAA TTGTTCTCAAAGAAAGCATTCAGTGAAGAAGTACGAGAGACAGCAGAATTGGTCACCATT GGAAGACTTATTGTCAAGAAATGCAAGGGGCTTCCTCTTGCTCTCAATGCTATGGGTGGC CTGATGAGCTCAAAGCAACAACTCCATGAATGGAAAGCCATCGCAGACAGTGCCAGAGAC AAAGATGAAATACTTTCCATGCTTAAATTAAGCTACAGACACTTACCATCCGAAATGAAG CAATGTTTTGCCTTCTGTTCCATATTCCCAAGGAACCATGAGATGGACAAGGAAGTCTTG ATCCAACTGTGGATGGCAAATGGTTTCATCCAAGAAGATGGAATAATGGATTTGGAACAA AAAGGAGAATACACCTTCCAATATTTGGTTTGGAGATCCTTCCTCCAAGATGTCAAAGCA AAGAAAACTCTGGACCATTTGGCAGAGCTCCAGCCGTCGACCATTCTACAAAAGGAAATT ATGGACAAGGCATTACCATATGAGTCCATTGGTTGCAAAATGCACGATTTGATGCATGAC CTAGCAAAAGACGTGGCAGACGAATGTGTAACTTCAGAACATGTACTTCAGCACGATGCA TCTGTCAGAAATGTCCGTCACATGAATATATCTAGCACTTTTGGTATGCAAGAAACTATG GAAATGTTACAAGTAACATCATCTCTCCGTACTTGGATAGTGCCATCACCCTTGTGCAGG GATCTCAAGGATTTAAGCCTGGCATCATTAAGAACCCTTGTAATTGAAAAGGGAATCTTC CATTACCATTCGGTTATGTCTAACCATGTGATCACTTATTCGAAGCATCTACGATATCTT GACCTATCTATGTCTCAAATTGTTATGTTGCCAAGTTCAATATGTGTGATGTATAACTTA CAAACATTGAGACTCAATGGTTGCAGCTTTCTAAAATATTTACCGGAAAGTATGGGAAAA ATGAGGAAGCTCCTCCATCTTTATCTTCTGGGATGTGATAGTTTGGTGCGGATGCCACCA AACTTTGGTCTTTTGAACAATCTTCGCACTCTAACAACATTTGTTTTGGACACTAAAGCT GGTTGTGGAATTGACGAGCTCAAGAACTTGCGTCACATTGCCAACAGGTTGGAACTGTAC AATTTGAGAAAAATTAATTGCAGGAACAATGGAATAGAAGCCAATCTCCATCAGAAGGAA AATCTAAGTGAACTACTATTGCACTGGGGTCGTGATAAAATTTACACACCGGAAAACAGT GCCTACAATGAGGAAGAAGTGTTGGAGTCACTTACACCTCATGGTAAGCTCAAAATTTTA GAGCTGCATGGATATAGTGGCCTGAAGATCCCACAATGGATGAGAGACCCACAGATGTTG CAGTGCCTAACAACTCTCCGCATTTCCAACTGTTTAGGATGCAAGGATCTATCAACACTG TGGTTATCGGTCTCGCTTGAGCATCTGCAGTTATCCCGTATGGATAATCTAACCACATTG TGTAAGAACGTTGGTGTGGGAGCTGAAGGATACACCATCCCTCAGCAAGTTTTCCCAAAG TTAAAGTCTCTGAAACTAGAGTTGTTATTTAGCTTGGAGAAATGGGCAGAAAATACTGCA GGTGAGGCTAAGAATTTGGTTACATTTCCAGAGCTCGAAATGCTACAGATCATTCGCTGT AGTAAACTTGCAAGTGTCCCAGACTGTCCGGTTCTAAAAGAACTGGACAGATTTGGATCT TATATGCTTGCAATGAACGAACTCACACATCTGACATCATTGTCCAAGCTCAATTACGTT GCAAACAGTCTTTGTGATTGTGTGAGCATGCCTTTGGGCTCATGGCCATCTCTCGTAGAA CTAGTTCTTAGATCTTCAACACACATTCCAACCACTCTGCAGGTGGAGGCAAATCAAGGC CAGCTAGAATACCTTCGGAGTTTGAGTCTAGTAAACTGCTTCACGGCTGCATCCGGCTCA TCCGAAATGCGTCTTGGGCTCTGGAAATGCTTTGCCTTTGTGGAGGTATTGCATATTCAT ATGTGCCTCAGTCTTGTGTGCTGGCCAACTGAGGAGTTGACGAGCTTGATTCACCTTCGA CACCTATATATTGAGCACTGTCATAGACTTGAGGGAAAAGGTTCATCATCCGAGGAAAAA TTCATGTCACTGTCCCATCTAGAGAGGTTACACATACAACACTGCTACAATCTACTGGAG ATCCCAATGCTGCCTGCATCCCTGCAGGATCTGCGGTTAGAATCTTGCCGAAGATTGGTG GCATTGCCTTCGAACCTTGGAAATCTGGCCATGTTAAGGCATCTTTATTTGATGAACTGC TATGTCCTGAAAGATCTTCCTGATGGGATGGATGGCCTCGTTTCCCTTAAAATTTTGGAG ATTCAGGCATGTGCAGAGATAGAGGAATTCCCACAGGGTCTCCTCCAGCGACTTCCAACA CTGAAAGAACTGTCCATACAAGGGTGCCCTGGATTGGAAACACGGTGCAGAGAAGGTGGT GAGTATTTTGATCTTGTCTCTTCCGTTCAACGTATATGCATTCCAGCAGCAGCGAAAACA GAAATGGAGGAGGAATCAAGGTCTGGAATCTAA

Peptide Sequence

PEP ID	Os08t0543050-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:27175631:27179263:-1 gene:Os08g0543050 transcript:Os08t0543050-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog PIC27 description:Similar to NBS2-RDG2A. (Os08t0543050-00)
Sequence	MAESLILPMVRGVAAKAADALVQRVTGACGAVDDDRRKLQRQLLAVQRALADAEAKSETN LAVRRWMKDLNAAAYEADDVLDDFRYEALRRDGDATAGKVLGYFTPHNPLLFRVTMSKKL SNVLEKMNKLVDKMNELGLSVDRTESPQELKPPYLQMHSAALDESSDIVGRDDDKEVVVK LLLDQRYEQRLQVLPVIGIGGSGKTTLAKMVYNDTRVRDHFQLKMWHCVSENFEAVPLLK SIVELATNRRCQVPDKDTIELLRRQLEGAIGSRRFLLVLDDVWNEDENKWKDELRPLLCS AAGGHGSVVVVTTRSQQVASIMGTMRSHELACLNDDDSWELFSKKAFSEEVRETAELVTI GRLIVKKCKGLPLALNAMGGLMSSKQQLHEWKAIADSARDKDEILSMLKLSYRHLPSEMK QCFAFCSIFPRNHEMDKEVLIQLWMANGFIQEDGIMDLEQKGEYTFQYLVWRSFLQDVKA KKTLDHLAELQPSTILQKEIMDKALPYESIGCKMHDLMHDLAKDVADECVTSEHVLQHDA SVRNVRHMNISSTFGMQETMEMLQVTSSLRTWIVPSPLCRDLKDLSLASLRTLVIEKGIF HYHSVMSNHVITYSKHLRYLDLSMSQIVMLPSSICVMYNLQTLRLNGCSFLKYLPESMGK MRKLLHLYLLGCDSLVRMPPNFGLLNNLRTLTTFVLDTKAGCGIDELKNLRHIANRLELY NLRKINCRNNGIEANLHQKENLSELLLHWGRDKIYTPENSAYNEEEVLESLTPHGKLKIL ELHGYSGLKIPQWMRDPQMLQCLTTLRISNCLGCKDLSTLWLSVSLEHLQLSRMDNLTTL CKNVGVGAEGYTIPQQVFPKLKSLKLELLFSLEKWAENTAGEAKNLVTFPELEMLQIIRC SKLASVPDCPVLKELDRFGSYMLAMNELTHLTSLSKLNYVANSLCDCVSMPLGSWPSLVE LVLRSSTHIPTTLQVEANQGQLEYLRSLSLVNCFTAASGSSEMRLGLWKCFAFVEVLHIH MCLSLVCWPTEELTSLIHLRHLYIEHCHRLEGKGSSSEEKFMSLSHLERLHIQHCYNLLE IPMLPASLQDLRLESCRRLVALPSNLGNLAMLRHLYLMNCYVLKDLPDGMDGLVSLKILE IQACAEIEEFPQGLLQRLPTLKELSIQGCPGLETRCREGGEYFDLVSSVQRICIPAAAKT EMEEESRSGI

Transcript Sequence

Transcript ID	Os08t0543050-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27175631:27179263:-1 gene:Os08g0543050 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:resistance gene analog PIC27 description:Similar to NBS2-RDG2A. (Os08t0543050-00)
Sequence	ATGGCGGAATCGCTAATCCTCCCCATGGTGCGCGGGGTGGCGGCGAAGGCCGCCGATGCA CTCGTACAGAGAGTCACCGGCGCGTGCGGCGCCGTCGACGACGACCGCCGCAAGCTGCAA CGCCAGCTGCTGGCCGTCCAGCGCGCGCTGGCCGACGCCGAGGCGAAGAGCGAGACCAAC CTCGCCGTCAGGCGCTGGATGAAGGACCTCAACGCCGCCGCCTACGAGGCCGACGACGTC CTCGACGACTTCCGCTACGAGGCGCTGCGCCGCGACGGCGACGCCACCGCCGGCAAGGTA CTCGGCTACTTCACCCCGCACAACCCACTCCTGTTCCGCGTAACCATGAGCAAGAAGCTG AGCAATGTCCTCGAGAAGATGAACAAGCTGGTTGACAAGATGAACGAGCTTGGCTTGTCA GTGGATCGCACAGAATCACCACAAGAACTGAAACCTCCTTATCTCCAGATGCATTCTGCT GCACTGGATGAATCAAGTGACATTGTTGGCAGAGACGACGACAAGGAGGTGGTGGTTAAG CTGTTGCTGGATCAGCGATATGAGCAGAGATTGCAGGTTCTCCCTGTCATCGGGATCGGG GGTTCAGGCAAGACGACGCTCGCCAAGATGGTGTACAACGACACGAGGGTACGTGACCAT TTCCAGCTGAAGATGTGGCACTGTGTTTCAGAGAATTTTGAAGCTGTTCCCCTTCTGAAA TCCATCGTTGAATTGGCTACAAATCGAAGATGTCAAGTGCCTGACAAGGACACCATCGAG CTCTTGCGACGGCAGCTTGAGGGAGCCATTGGTAGCAGAAGGTTTCTGTTAGTTCTTGAC GATGTATGGAACGAGGATGAGAACAAGTGGAAGGATGAACTAAGGCCACTCTTGTGCTCT GCTGCTGGTGGTCATGGAAGTGTTGTAGTGGTCACAACTCGGAGCCAACAAGTAGCATCT ATCATGGGCACCATGAGATCCCATGAACTAGCATGTCTGAATGATGATGATTCATGGGAA TTGTTCTCAAAGAAAGCATTCAGTGAAGAAGTACGAGAGACAGCAGAATTGGTCACCATT GGAAGACTTATTGTCAAGAAATGCAAGGGGCTTCCTCTTGCTCTCAATGCTATGGGTGGC CTGATGAGCTCAAAGCAACAACTCCATGAATGGAAAGCCATCGCAGACAGTGCCAGAGAC AAAGATGAAATACTTTCCATGCTTAAATTAAGCTACAGACACTTACCATCCGAAATGAAG CAATGTTTTGCCTTCTGTTCCATATTCCCAAGGAACCATGAGATGGACAAGGAAGTCTTG ATCCAACTGTGGATGGCAAATGGTTTCATCCAAGAAGATGGAATAATGGATTTGGAACAA AAAGGAGAATACACCTTCCAATATTTGGTTTGGAGATCCTTCCTCCAAGATGTCAAAGCA AAGAAAACTCTGGACCATTTGGCAGAGCTCCAGCCGTCGACCATTCTACAAAAGGAAATT ATGGACAAGGCATTACCATATGAGTCCATTGGTTGCAAAATGCACGATTTGATGCATGAC CTAGCAAAAGACGTGGCAGACGAATGTGTAACTTCAGAACATGTACTTCAGCACGATGCA TCTGTCAGAAATGTCCGTCACATGAATATATCTAGCACTTTTGGTATGCAAGAAACTATG GAAATGTTACAAGTAACATCATCTCTCCGTACTTGGATAGTGCCATCACCCTTGTGCAGG GATCTCAAGGATTTAAGCCTGGCATCATTAAGAACCCTTGTAATTGAAAAGGGAATCTTC CATTACCATTCGGTTATGTCTAACCATGTGATCACTTATTCGAAGCATCTACGATATCTT GACCTATCTATGTCTCAAATTGTTATGTTGCCAAGTTCAATATGTGTGATGTATAACTTA CAAACATTGAGACTCAATGGTTGCAGCTTTCTAAAATATTTACCGGAAAGTATGGGAAAA ATGAGGAAGCTCCTCCATCTTTATCTTCTGGGATGTGATAGTTTGGTGCGGATGCCACCA AACTTTGGTCTTTTGAACAATCTTCGCACTCTAACAACATTTGTTTTGGACACTAAAGCT GGTTGTGGAATTGACGAGCTCAAGAACTTGCGTCACATTGCCAACAGGTTGGAACTGTAC AATTTGAGAAAAATTAATTGCAGGAACAATGGAATAGAAGCCAATCTCCATCAGAAGGAA AATCTAAGTGAACTACTATTGCACTGGGGTCGTGATAAAATTTACACACCGGAAAACAGT GCCTACAATGAGGAAGAAGTGTTGGAGTCACTTACACCTCATGGTAAGCTCAAAATTTTA GAGCTGCATGGATATAGTGGCCTGAAGATCCCACAATGGATGAGAGACCCACAGATGTTG CAGTGCCTAACAACTCTCCGCATTTCCAACTGTTTAGGATGCAAGGATCTATCAACACTG TGGTTATCGGTCTCGCTTGAGCATCTGCAGTTATCCCGTATGGATAATCTAACCACATTG TGTAAGAACGTTGGTGTGGGAGCTGAAGGATACACCATCCCTCAGCAAGTTTTCCCAAAG TTAAAGTCTCTGAAACTAGAGTTGTTATTTAGCTTGGAGAAATGGGCAGAAAATACTGCA GGTGAGGCTAAGAATTTGGTTACATTTCCAGAGCTCGAAATGCTACAGATCATTCGCTGT AGTAAACTTGCAAGTGTCCCAGACTGTCCGGTTCTAAAAGAACTGGACAGATTTGGATCT TATATGCTTGCAATGAACGAACTCACACATCTGACATCATTGTCCAAGCTCAATTACGTT GCAAACAGTCTTTGTGATTGTGTGAGCATGCCTTTGGGCTCATGGCCATCTCTCGTAGAA CTAGTTCTTAGATCTTCAACACACATTCCAACCACTCTGCAGGTGGAGGCAAATCAAGGC CAGCTAGAATACCTTCGGAGTTTGAGTCTAGTAAACTGCTTCACGGCTGCATCCGGCTCA TCCGAAATGCGTCTTGGGCTCTGGAAATGCTTTGCCTTTGTGGAGGTATTGCATATTCAT ATGTGCCTCAGTCTTGTGTGCTGGCCAACTGAGGAGTTGACGAGCTTGATTCACCTTCGA CACCTATATATTGAGCACTGTCATAGACTTGAGGGAAAAGGTTCATCATCCGAGGAAAAA TTCATGTCACTGTCCCATCTAGAGAGGTTACACATACAACACTGCTACAATCTACTGGAG ATCCCAATGCTGCCTGCATCCCTGCAGGATCTGCGGTTAGAATCTTGCCGAAGATTGGTG GCATTGCCTTCGAACCTTGGAAATCTGGCCATGTTAAGGCATCTTTATTTGATGAACTGC TATGTCCTGAAAGATCTTCCTGATGGGATGGATGGCCTCGTTTCCCTTAAAATTTTGGAG ATTCAGGCATGTGCAGAGATAGAGGAATTCCCACAGGGTCTCCTCCAGCGACTTCCAACA CTGAAAGAACTGTCCATACAAGGGTGCCCTGGATTGGAAACACGGTGCAGAGAAGGTGGT GAGTATTTTGATCTTGTCTCTTCCGTTCAACGTATATGCATTCCAGCAGCAGCGAAAACA GAAATGGAGGAGGAATCAAGGTCTGGAATCTAA