Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0543000-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:27169279:27170690:-1 gene:Os08g0543000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0543000-00)
Sequence

ATGAACAGCATCAGGAGGTTTTCTGGGATGCGCAAGCCTAACGCCCCATCTGCAATACAT
AAAGACAAAGACGAGAGCGTAGTTTTCTTCAGGGAGATGTACAAGCGTGAAAAAGATAGG
GACATCAACCTCCTGGAACCCATGCAATCCGTTGAGTTTGATGCTATCCAAGGTGGCCGC
ACGAGCAAAGCTCCGTCAGGGAAGACAGATTTCCTCATAGCAGTGGACGAGAAGCATGAC
TACGACTGGCTGAAGACGCCTCCAGCTACACCACTGTTTCCTTCCATAGAGATGGAAACC
AACTCATCTCAAATGGTTTTCCAGAAGGAGCTACCAATTCATCAGCAAGTTAAACCTTCA
GCTTCCAGGCTATCAGGAAAGACAGAGGCAACGAAAACATCGGCAAGATCAATGTTTCCT
GCACCTAACTCTTCATCAGAGAAGAGCATATTCAGAGTGTCCACACAATCCATCTCCAAT
GAGAAGAACCAAATTGAAAGGAGATCAACTTCTGCAGCCATAACGAGCAGGAAGCAGAAG
GTAGTTGCTGCAATTACACCTACAGCTCCTACCGCAACTTGCAATGCAACCAAGAAACAC
TCTGAAAGATGCTATGCAAGCCAAGGTAGCAGTACAAATGGACTCAAGAGAGTGACGAAC
CCTGAGCTCCCCTACTGTGCACCGAAGAATCTGATCACAACGCCATTGACAGCGAAAGCA
TGGCGTAGTGATCTAGCATTTGGTGTGCATGACACAGCAGAAATTGGCAGGATAAGAAGG
CAGTCATGCCTACCAGTTACTGTCATGGATGGCAAGCAGAAAGGCTTACCTGATAAGGTG
AAGGCTGTGACTGTCAGCAATAACCGTGGTCGTGCAGGCGATGCCACATTGATCAAGGGA
ATGAGAAGAACAGACGGGAAGAAAGAGCAGAGGCCAAAGCATGGAAATCAAGCGAAGTGA

Peptide Sequence

PEP ID

Os08t0543000-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:27169279:27170690:-1 gene:Os08g0543000 transcript:Os08t0543000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0543000-00)
Sequence

MNSIRRFSGMRKPNAPSAIHKDKDESVVFFREMYKREKDRDINLLEPMQSVEFDAIQGGR
TSKAPSGKTDFLIAVDEKHDYDWLKTPPATPLFPSIEMETNSSQMVFQKELPIHQQVKPS
ASRLSGKTEATKTSARSMFPAPNSSSEKSIFRVSTQSISNEKNQIERRSTSAAITSRKQK
VVAAITPTAPTATCNATKKHSERCYASQGSSTNGLKRVTNPELPYCAPKNLITTPLTAKA
WRSDLAFGVHDTAEIGRIRRQSCLPVTVMDGKQKGLPDKVKAVTVSNNRGRAGDATLIKG
MRRTDGKKEQRPKHGNQAK

Transcript Sequence

Transcript ID

Os08t0543000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:27169279:27170690:-1 gene:Os08g0543000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os08t0543000-00)
Sequence

ATGAACAGCATCAGGAGGTTTTCTGGGATGCGCAAGCCTAACGCCCCATCTGCAATACAT
AAAGACAAAGACGAGAGCGTAGTTTTCTTCAGGGAGATGTACAAGCGTGAAAAAGATAGG
GACATCAACCTCCTGGAACCCATGCAATCCGTTGAGTTTGATGCTATCCAAGGTGGCCGC
ACGAGCAAAGCTCCGTCAGGGAAGACAGATTTCCTCATAGCAGTGGACGAGAAGCATGAC
TACGACTGGCTGAAGACGCCTCCAGCTACACCACTGTTTCCTTCCATAGAGATGGAAACC
AACTCATCTCAAATGGTTTTCCAGAAGGAGCTACCAATTCATCAGCAAGTTAAACCTTCA
GCTTCCAGGCTATCAGGAAAGACAGAGGCAACGAAAACATCGGCAAGATCAATGTTTCCT
GCACCTAACTCTTCATCAGAGAAGAGCATATTCAGAGTGTCCACACAATCCATCTCCAAT
GAGAAGAACCAAATTGAAAGGAGATCAACTTCTGCAGCCATAACGAGCAGGAAGCAGAAG
GTAGTTGCTGCAATTACACCTACAGCTCCTACCGCAACTTGCAATGCAACCAAGAAACAC
TCTGAAAGATGCTATGCAAGCCAAGGTAGCAGTACAAATGGACTCAAGAGAGTGACGAAC
CCTGAGCTCCCCTACTGTGCACCGAAGAATCTGATCACAACGCCATTGACAGCGAAAGCA
TGGCGTAGTGATCTAGCATTTGGTGTGCATGACACAGCAGAAATTGGCAGGATAAGAAGG
CAGTCATGCCTACCAGTTACTGTCATGGATGGCAAGCAGAAAGGCTTACCTGATAAGGTG
AAGGCTGTGACTGTCAGCAATAACCGTGGTCGTGCAGGCGATGCCACATTGATCAAGGGA
ATGAGAAGAACAGACGGGAAGAAAGAGCAGAGGCCAAAGCATGGAAATCAAGCGAAGTGA