Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0542900-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27163603:27169027:1 gene:Os08g0542900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lupus La protein family protein. (Os08t0542900-01)
Sequence	ATGGCGCAGGACGACGCCCCGGACTCCACCACCTCCTCCTCATCCGCCTCATCCGCCTCC GCCCCCGCCCCCTCCGCCGCCCGCCTCAACGCCGCCGCCCCGGAGTTCACCCCTCGATCC GCCGCCCACCACCACCACCACCACGCCAACCCTCGCCGCCAGCACCGCGGGGGCGGGGGT GGGGCCTACCACCACCACCAGCAGCACTACCAGCCGCACCACCACCACCAGCACCACCAG CACTGGCAACACTACGGGGAGGATGAGGGGGACGCCGCGGCGGCCGGGGCGGTGGGAGAA GGAGGGATCCCGGAGGATGTGGCTCGTCGGGTCGTCAAGCAGGTGGAATTTTACTTCAGT GATGTCAATCTGGCTACAACAGAACATTTGATGAAATTCATGATTAGAGATCCAGAGGGA TTTGTGCCAATGTCTGTAGTTGCATCTTTTAGGAAGATCCGGGAGTTAGTTAGTGAGAGA TCCGCATTGGCTGCAGTATTGCGGACGTCAGCAGAGCTGGTTGTTTCAGATGATGGAAAA AGGGTTAGACGTCGAGTGCTCTTTACTGAGGCGGATGCTGAAGAAGTTCAGTCACGCATT GTTGTTGCTGAAAATTTGCGTGAAGAGCACCGCTATCCAAATCTTATGAAGATTTTCTCA GCTTTTGGGAGTGTGAAATCAATTCGTACTTGCTATCCACAAGGTGGGATTGATGGTGCT GGAACTTCTACTGGCAAAGCATCAAAGATTGAGATGTTGTTTGCTAATAAGGTGCATGCT TTTGTGGAGTATGAAACTGTTGAAGATGCTGAAAAGGCAGTTTCTGAATTCAGTAGTGGG AGAAGCTGGAGAGATGGGATTAGAGTCCGCTCACTGCTTGGTTGCCTGAAACAAGCCATG GGTCAAGGAAGAAGAGGTGGAGATGAGGTGGATGCTGCAGACGAAGATGACCCTGAAACA ACTGACCATCCACAAGACTACGAAACAGAGGATGCTTCCCAGATTTCAGAAGCACATCTT GATCATCAGGCTGATGATGGCTACCATGACAAAGGCGGGATGAGGCACGGGAGAGGGAGA GGACGTGGTGGAAGAGGGCGTGGCCGTGGTCAGTACTATGGCCATAGCCGGGATGCCAAT CATCCAATTGGCACTCCTCCATCGAATCACAGTGCTCTTGCTGATCATCCTTCAAAGCCA CCCCCTGGTCCTCGTATGCCAGATGGCACAAGAGGATTTACCATGGGGCGAGGAAAGCCA CTCAATCCTACCAATGCTGTTTAA

Peptide Sequence

PEP ID	Os08t0542900-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27163603:27169027:1 gene:Os08g0542900 transcript:Os08t0542900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lupus La protein family protein. (Os08t0542900-01)
Sequence	MAQDDAPDSTTSSSSASSASAPAPSAARLNAAAPEFTPRSAAHHHHHHANPRRQHRGGGG GAYHHHQQHYQPHHHHQHHQHWQHYGEDEGDAAAAGAVGEGGIPEDVARRVVKQVEFYFS DVNLATTEHLMKFMIRDPEGFVPMSVVASFRKIRELVSERSALAAVLRTSAELVVSDDGK RVRRRVLFTEADAEEVQSRIVVAENLREEHRYPNLMKIFSAFGSVKSIRTCYPQGGIDGA GTSTGKASKIEMLFANKVHAFVEYETVEDAEKAVSEFSSGRSWRDGIRVRSLLGCLKQAM GQGRRGGDEVDAADEDDPETTDHPQDYETEDASQISEAHLDHQADDGYHDKGGMRHGRGR GRGGRGRGRGQYYGHSRDANHPIGTPPSNHSALADHPSKPPPGPRMPDGTRGFTMGRGKP LNPTNAV

Transcript Sequence

Transcript ID	Os08t0542900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27163603:27169027:1 gene:Os08g0542900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lupus La protein family protein. (Os08t0542900-01)
Sequence	GAGTCCCCCCAAGCAAACCCTTCTTCTCTCTCTCTCTCTCTCCTCTCACGCTTCGCTCGC GGCCGCTCCTCTCTCTCTCCATCCATCCATGGCGCAGGACGACGCCCCGGACTCCACCAC CTCCTCCTCATCCGCCTCATCCGCCTCCGCCCCCGCCCCCTCCGCCGCCCGCCTCAACGC CGCCGCCCCGGAGTTCACCCCTCGATCCGCCGCCCACCACCACCACCACCACGCCAACCC TCGCCGCCAGCACCGCGGGGGCGGGGGTGGGGCCTACCACCACCACCAGCAGCACTACCA GCCGCACCACCACCACCAGCACCACCAGCACTGGCAACACTACGGGGAGGATGAGGGGGA CGCCGCGGCGGCCGGGGCGGTGGGAGAAGGAGGGATCCCGGAGGATGTGGCTCGTCGGGT CGTCAAGCAGGTGGAATTTTACTTCAGTGATGTCAATCTGGCTACAACAGAACATTTGAT GAAATTCATGATTAGAGATCCAGAGGGATTTGTGCCAATGTCTGTAGTTGCATCTTTTAG GAAGATCCGGGAGTTAGTTAGTGAGAGATCCGCATTGGCTGCAGTATTGCGGACGTCAGC AGAGCTGGTTGTTTCAGATGATGGAAAAAGGGTTAGACGTCGAGTGCTCTTTACTGAGGC GGATGCTGAAGAAGTTCAGTCACGCATTGTTGTTGCTGAAAATTTGCGTGAAGAGCACCG CTATCCAAATCTTATGAAGATTTTCTCAGCTTTTGGGAGTGTGAAATCAATTCGTACTTG CTATCCACAAGGTGGGATTGATGGTGCTGGAACTTCTACTGGCAAAGCATCAAAGATTGA GATGTTGTTTGCTAATAAGGTGCATGCTTTTGTGGAGTATGAAACTGTTGAAGATGCTGA AAAGGCAGTTTCTGAATTCAGTAGTGGGAGAAGCTGGAGAGATGGGATTAGAGTCCGCTC ACTGCTTGGTTGCCTGAAACAAGCCATGGGTCAAGGAAGAAGAGGTGGAGATGAGGTGGA TGCTGCAGACGAAGATGACCCTGAAACAACTGACCATCCACAAGACTACGAAACAGAGGA TGCTTCCCAGATTTCAGAAGCACATCTTGATCATCAGGCTGATGATGGCTACCATGACAA AGGCGGGATGAGGCACGGGAGAGGGAGAGGACGTGGTGGAAGAGGGCGTGGCCGTGGTCA GTACTATGGCCATAGCCGGGATGCCAATCATCCAATTGGCACTCCTCCATCGAATCACAG TGCTCTTGCTGATCATCCTTCAAAGCCACCCCCTGGTCCTCGTATGCCAGATGGCACAAG AGGATTTACCATGGGGCGAGGAAAGCCACTCAATCCTACCAATGCTGTTTAATGGCAGTG GCCATGCCGGTGGCAGCCTGTTGCCCTGTTCCCTCTTGCAAATCTGATACTTGCCTCAGG TTCCAAACCGATGAACGCCGATTACCGTTGATACTATAGTTAGATACAACATGTGTTGGT TCGTTTTGGTGCAAGATTCTGCAGAGAAAAGTTTTACCTGGTACATGCATGTATACTGGT ACAGCAGTGGTGCTGGCAATGTGAACATGTCTTTTGATATCTGGATGCTAGTTAATTTAG CAAAATATGTAGATATAGATG