Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0542700-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27156469:27160507:1 gene:Os08g0542700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os08t0542700-01)
Sequence	ATGGAGAGGCAGACGAGCTTCCGATTGGGCGCGCTGGAGAAGCTCAAGAGCTTCAGGGGG ATGGAGAAGCAGAAGAGCTTCAAGATGATGTCCACGGACAACTTCCGGAGGCACAGGGAC AGCCCCGGGAAGCGCGGCGACACGCCGCTCCACCTCGCCGCGAGGTCCGGGAACGCCGCC GGCGCGCAGCGGATCATCGCCGAGTTCGACCCGGAGGTGGCGGCGGAGCGCGCCGCGCAG GCCAACCACGACGGCGAGACGCCGCTGTACGTCGCCGCCGAGAGGGGGCACACCGACGTG GTGCGCGAGATCCTCAAGGTCTCCGACGTGCAGACGGCCGGCGTCAAGGCGAACAACAGC TTCGACGCGTTCCATATTGCGGCGAAGCAAGGCCATCTAGAAGTTCTGAAGGAGCTGTTG CAGGCTTTTCCTGCTCTTGCAATGACTACAAATTCTGTAAATGCTACAGCTTTGGATACT GCTGCAATTCTGGGTCACACTGAAATTGTTAACCTCCTACTGGAATCTGATGCAAACCTT GCGAGAATTGCAAGAAATAATGGGAAGACAGTTCTGCATTCAGCTGCAAGACTGGGCCAT GTGGAAATTGTAAGATCATTATTAAGTAGGGATCCAGGAATTGGTTTAAGAACTGACAAG AAGGGGCAAACAGCACTACATATGGCTTCAAAAGGACAAAATGCTGAAATTGTTATCGAG CTGTTGAAGCCTGATATCTCAGTAATTCATCTGGAAGACAACAAGGGAAACAGACCATTG CATGTTGCAACACGGAAGGCCAATATCGTTATAGTGCAGACTCTACTATCAGTTGAGGGA ATTGAAGTAAATGCAGTTAACAGATCAGGGCACACCGCTCTTGCCATTGCTGAGCAACTC AACAATGAAGAACTTGTTAACATCTTGAGAGAGGCTGGTGGAGTAACTGCAAAAGAGCAA GTACATCCACCCAATCCGGCAAAGCAACTTAAGCAAACAGTTAGTGATATCAGACATGAT GTCCAGTCCCAGATCAAGCAAACTAAACAGACCAAGATGCAAGTCCAGAAAATCAAGAAG AGACTCGAAAAACTCCACATTGGTGGTCTAAACAATGCCATCAACTCCAATACTGTGGTT GCAGTGCTTATTGCCACCGTCGCCTTTGCTGCCATTTTCACCGTTCCTGGCAATTTTGTG GAAGATATCACTCAGGCACCTCCAGGCATGTCCTTGGGGCAGGCATATGTAGCAAGCAAC CCGGCCTTCCTAGTATTTTTGGTCTTTGATGCCTTGGCTCTCTTCATCTCACTTGCTGTC GTCGTCGTCCAGACCTCGCTAATTGTTGTTGAGCAGAAAGCCAAGAGAAGGATGGTCTTT GTGATGAACAAGCTGATGTGGCTGGCATGCCTCTTTATCTCGGTGGCCTTCATAGCACTA ACCTATGTTGTTGTCGGGCGCGACGACTGGTGGCTAGCTTGGTGCACAATGGCAATCGGT GCAGTGATCATGCTTACAACTCTTGGTTCCATGTGCTACTGTATCATTGCTCATAGGATG GATGAGAGGAAGATCAGGAAGGCGTCTACAAGCCAATCTCGCTCATGGTCTCAAACAGTT GACTCAGATCCAGATCTACTCAACAGTGAATATAAGAAAATGTATGCACTATAG

Peptide Sequence

PEP ID	Os08t0542700-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27156469:27160507:1 gene:Os08g0542700 transcript:Os08t0542700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os08t0542700-01)
Sequence	MERQTSFRLGALEKLKSFRGMEKQKSFKMMSTDNFRRHRDSPGKRGDTPLHLAARSGNAA GAQRIIAEFDPEVAAERAAQANHDGETPLYVAAERGHTDVVREILKVSDVQTAGVKANNS FDAFHIAAKQGHLEVLKELLQAFPALAMTTNSVNATALDTAAILGHTEIVNLLLESDANL ARIARNNGKTVLHSAARLGHVEIVRSLLSRDPGIGLRTDKKGQTALHMASKGQNAEIVIE LLKPDISVIHLEDNKGNRPLHVATRKANIVIVQTLLSVEGIEVNAVNRSGHTALAIAEQL NNEELVNILREAGGVTAKEQVHPPNPAKQLKQTVSDIRHDVQSQIKQTKQTKMQVQKIKK RLEKLHIGGLNNAINSNTVVAVLIATVAFAAIFTVPGNFVEDITQAPPGMSLGQAYVASN PAFLVFLVFDALALFISLAVVVVQTSLIVVEQKAKRRMVFVMNKLMWLACLFISVAFIAL TYVVVGRDDWWLAWCTMAIGAVIMLTTLGSMCYCIIAHRMDERKIRKASTSQSRSWSQTV DSDPDLLNSEYKKMYAL

Transcript Sequence

Transcript ID	Os08t0542700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27156469:27160507:1 gene:Os08g0542700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat containing protein. (Os08t0542700-01)
Sequence	GGGCTGCTGCTAGGCGGCAGCATATTTGTCTTCTGGCAGTTGTGCTGAGAAGCCAGGCAG AGGGGAGTTTAGCCTGAAAGTGAGCTCTCTAGGGAGATAGAGAGAGAAGAGGGCCAAAGA AGAAGAAGAAATCAAAGCTAGGAGAGGTCCAAGATTCCCACTAGGACCCTTTCTTGGTTC TCTTCTTTTTCTTTGGCTGATTGGAAGGTCTAGAGTCAATCACTTGGTTTCTTTTGTTTC TTTTCTTTGGCTCCATTGGTTCTTCTTGCCTTCCAATCGTTCTAAGGGGTGGATAGAATT TTTGGAGTATCACCTATCAGGCACTCTGTTCATGGCCCAATGATTTTGATTGGTGGGCAG ATTTTCACAGACCCCCCATTCCAGTTTTTTTTTCCCAAGGGGATGCGCGAATCTTGCTGC TAATGTTCTTGTGAATCAAAGCCAGGAGATTTCTGGAAAGTGAGGAATTCTTTTCTTAGA TTGCAATATCAATCACAGCGCTTTCTCCACAAGTTGCAATCTCTGAGCGCTTTTGATCTC TCCACACCAACCAAAAGCAACAGAAATTTACCTTGGATTCCGCGGTTTTGAAGAATCTGT TCTGATTTGGAGATGGAGAGGCAGACGAGCTTCCGATTGGGCGCGCTGGAGAAGCTCAAG AGCTTCAGGGGGATGGAGAAGCAGAAGAGCTTCAAGATGATGTCCACGGACAACTTCCGG AGGCACAGGGACAGCCCCGGGAAGCGCGGCGACACGCCGCTCCACCTCGCCGCGAGGTCC GGGAACGCCGCCGGCGCGCAGCGGATCATCGCCGAGTTCGACCCGGAGGTGGCGGCGGAG CGCGCCGCGCAGGCCAACCACGACGGCGAGACGCCGCTGTACGTCGCCGCCGAGAGGGGG CACACCGACGTGGTGCGCGAGATCCTCAAGGTCTCCGACGTGCAGACGGCCGGCGTCAAG GCGAACAACAGCTTCGACGCGTTCCATATTGCGGCGAAGCAAGGCCATCTAGAAGTTCTG AAGGAGCTGTTGCAGGCTTTTCCTGCTCTTGCAATGACTACAAATTCTGTAAATGCTACA GCTTTGGATACTGCTGCAATTCTGGGTCACACTGAAATTGTTAACCTCCTACTGGAATCT GATGCAAACCTTGCGAGAATTGCAAGAAATAATGGGAAGACAGTTCTGCATTCAGCTGCA AGACTGGGCCATGTGGAAATTGTAAGATCATTATTAAGTAGGGATCCAGGAATTGGTTTA AGAACTGACAAGAAGGGGCAAACAGCACTACATATGGCTTCAAAAGGACAAAATGCTGAA ATTGTTATCGAGCTGTTGAAGCCTGATATCTCAGTAATTCATCTGGAAGACAACAAGGGA AACAGACCATTGCATGTTGCAACACGGAAGGCCAATATCGTTATAGTGCAGACTCTACTA TCAGTTGAGGGAATTGAAGTAAATGCAGTTAACAGATCAGGGCACACCGCTCTTGCCATT GCTGAGCAACTCAACAATGAAGAACTTGTTAACATCTTGAGAGAGGCTGGTGGAGTAACT GCAAAAGAGCAAGTACATCCACCCAATCCGGCAAAGCAACTTAAGCAAACAGTTAGTGAT ATCAGACATGATGTCCAGTCCCAGATCAAGCAAACTAAACAGACCAAGATGCAAGTCCAG AAAATCAAGAAGAGACTCGAAAAACTCCACATTGGTGGTCTAAACAATGCCATCAACTCC AATACTGTGGTTGCAGTGCTTATTGCCACCGTCGCCTTTGCTGCCATTTTCACCGTTCCT GGCAATTTTGTGGAAGATATCACTCAGGCACCTCCAGGCATGTCCTTGGGGCAGGCATAT GTAGCAAGCAACCCGGCCTTCCTAGTATTTTTGGTCTTTGATGCCTTGGCTCTCTTCATC TCACTTGCTGTCGTCGTCGTCCAGACCTCGCTAATTGTTGTTGAGCAGAAAGCCAAGAGA AGGATGGTCTTTGTGATGAACAAGCTGATGTGGCTGGCATGCCTCTTTATCTCGGTGGCC TTCATAGCACTAACCTATGTTGTTGTCGGGCGCGACGACTGGTGGCTAGCTTGGTGCACA ATGGCAATCGGTGCAGTGATCATGCTTACAACTCTTGGTTCCATGTGCTACTGTATCATT GCTCATAGGATGGATGAGAGGAAGATCAGGAAGGCGTCTACAAGCCAATCTCGCTCATGG TCTCAAACAGTTGACTCAGATCCAGATCTACTCAACAGTGAATATAAGAAAATGTATGCA CTATAGGATAATAGTTACATGATGATGGAATCCATGTACACGAGAGTGCTGTTTTTTTTT ACCCGAGGCAACAAGAAGAATGGAATTGACATGGAAGTCTTTGTTCAGAGCAAGGTGCCA GCTATATTAACTGAAGGCACCTTACTGCAATGCAAAGCAAGTTAACTGAACTGCCAAAAC AAAGGAAGTTAACTGAAGAAACCTCACACTGGCTGCTGAATTTGTTCCTGGTGTTTACCT GGAGCTGTGGTCTCGTGTCAGCGAATGAACACCTGCTAAAATTGTTTTGTTGTTGCTAAA AAAAGGTCAATAGTGAGGGCAACAATACGATTTGTAGACTGTACTAGGAAAAGAAAAATA CTATGCTCTGTCACATACCTTGGACATGTCTGCTGCATGTTGTTGCTCGATGAGCTAGAA AATACTTCGTATTTCCTTTCTTTTACCATCCTG