Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0542200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27130095:27133316:1 gene:Os08g0542200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Resistance gene analog PIC25 (Fragment). (Os08t0542200-01)
Sequence	ATGAAGGACCTCAAGGCTGTCGCCTACGAGGCCGACGACGTCCTCGACGACTTCGAGTAC GAGGCTCTGCGCCGCGAGGTCAAGATCGGCGACTCCACCACCCGCAAGGTACTCGGCTAC TTCACGCCGCATAGCCCACTCCTGTTCCGTGTTACCATGAGTAGGAAGCTGGGCGATGTC CTCAAGAAGATCAACGATCTGGTTGAAGAGATGAACAAGTTTGGCCTGATGGAGCACACA GAGGCGCCACAGCTTCCTTATCGGCTAACACACTCGGGGCTGGACGAGTCAGCAGACATA TTTGGGCGAGAGCATGACAAGGAGGTGTTGGTTAAACTGATGCTGGATCAGCATGATCAA CAGAATTTGCAGGTTCTCCCCATCGTGGGGATGGGCGGTTTGGGCAAGACAACGCTTGCG AAGATGGTGTACAACGATCCGATTGTCCAGAAACATTTCCAACTGAAGATGTGGCACTGT GTTTCGGAGAACTTTGAACCTATTTCTATTGTGAAATCCATCATTGAGTTGGCTACAAAT AGAAAATGTGACCTACCTGACTCAATTGAGTTGTTGCGAAGGCGACTTGAAGGAGTCATT GACAGGAAAAGGTTTCTACTTGTTCTTGATGATGTATGGAATGAGGACGACAACAAGTGG AATGAACACCTAAGGCCACTTCTGAATTCTGTCGGGGGTCCAGGGAGCATTATAGTCATC ACAACTCGCAATCGGCGGGTGGCATCTATAATGGAAACCCTTCAACCCTATAAGCCAGCA TGTCTAAGTGAAGATGAATCATGGGAATTGTTCTCGAAGAGAGCGTTTGGTAGAGACGTA CAAGAGCAAGAAGATTTGGTCACCATTGGCAAATGTATTGTACATAAATGCAAGGGGCTG CCACTTGCTCTGAAGACGATGGGCGGTCTAATGAGTTCCAAACACCAAGTCAAGGAATGG GAAGCCATCGCAAGAAGTAATATTGGTGATAGTGTCAAAGGAAAAGACGAAATCTTATCA ATACTAAAATTGAGCTACAAACACTTGCCATCTGAAATGAAACAATGCTTCACCTTCTGT GCAATTTTCTGCAAGGACTATGAGATGGAGAAGGACATGTTGATCCAACTATGGATAGCA AATGGTTTTATTCAAGAAGAGGGCACAATTGAGTTGTCACAAAAAGGCGAGTTTGTTTTC AATGAGTTGGTTTGGAGATCATTTCTTCAAGATGTTAAAACAATATTATTCAGAAGCTTA GATTATGACTTTGTTGTATGTAAAATGCATGATTTAATGCATGACTTAGCAAAAGACGTT TCAAGTGAATGTGCAACTACAGAAGAACTGATTCAACAGAAAGCACCATCTGAAGATGTT TGGCATGTGCAAATATCAGAAGGTGAATTAAAACAAATCAGTGGATCATTCAAAGGGGAA TTGAGGAGCTCAAACAGTTGA

Peptide Sequence

PEP ID	Os08t0542200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27130095:27133316:1 gene:Os08g0542200 transcript:Os08t0542200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Resistance gene analog PIC25 (Fragment). (Os08t0542200-01)
Sequence	MKDLKAVAYEADDVLDDFEYEALRREVKIGDSTTRKVLGYFTPHSPLLFRVTMSRKLGDV LKKINDLVEEMNKFGLMEHTEAPQLPYRLTHSGLDESADIFGREHDKEVLVKLMLDQHDQ QNLQVLPIVGMGGLGKTTLAKMVYNDPIVQKHFQLKMWHCVSENFEPISIVKSIIELATN RKCDLPDSIELLRRRLEGVIDRKRFLLVLDDVWNEDDNKWNEHLRPLLNSVGGPGSIIVI TTRNRRVASIMETLQPYKPACLSEDESWELFSKRAFGRDVQEQEDLVTIGKCIVHKCKGL PLALKTMGGLMSSKHQVKEWEAIARSNIGDSVKGKDEILSILKLSYKHLPSEMKQCFTFC AIFCKDYEMEKDMLIQLWIANGFIQEEGTIELSQKGEFVFNELVWRSFLQDVKTILFRSL DYDFVVCKMHDLMHDLAKDVSSECATTEELIQQKAPSEDVWHVQISEGELKQISGSFKGE LRSSNS

Transcript Sequence

Transcript ID	Os08t0542200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27130095:27133316:1 gene:Os08g0542200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Resistance gene analog PIC25 (Fragment). (Os08t0542200-01)
Sequence	GAATTACGGACCAGAGTGCCCAGAGCGCTTCATGCTTTGCCTTTCATCTTCATTCATTCC ACCGTGCTTTGCAGCTGAGAACGCAACATGGCGGAATCGCTTCCCGGTGGTGCGCGGGGT GGCTGGCAAGGCGGCGAACGCGCTCGTCCAGAGCGTCACGCGCGTGTGCGGCGTCGACGG CGACCGCCGCAAGCTGGAGCGCCAGCTTCTGGCCGTCCAGTGCAAGCTGGCCGATGCCAA GGCGAAGAGCGAGACTAAGGGTGTAAGTGGGTCAGCCGCGAACCTACTTATAGGTCAAAA TAAGCGGGCTCGCGGCTTATTTTAGCCTATAAGTGGGTTTCACGGGTTAGCCACTTACAA CCCTAAGCGAGACCAACCCCGCCGTCAAGCGCTGGATGAAGGACCTCAAGGCTGTCGCCT ACGAGGCCGACGACGTCCTCGACGACTTCGAGTACGAGGCTCTGCGCCGCGAGGTCAAGA TCGGCGACTCCACCACCCGCAAGGTACTCGGCTACTTCACGCCGCATAGCCCACTCCTGT TCCGTGTTACCATGAGTAGGAAGCTGGGCGATGTCCTCAAGAAGATCAACGATCTGGTTG AAGAGATGAACAAGTTTGGCCTGATGGAGCACACAGAGGCGCCACAGCTTCCTTATCGGC TAACACACTCGGGGCTGGACGAGTCAGCAGACATATTTGGGCGAGAGCATGACAAGGAGG TGTTGGTTAAACTGATGCTGGATCAGCATGATCAACAGAATTTGCAGGTTCTCCCCATCG TGGGGATGGGCGGTTTGGGCAAGACAACGCTTGCGAAGATGGTGTACAACGATCCGATTG TCCAGAAACATTTCCAACTGAAGATGTGGCACTGTGTTTCGGAGAACTTTGAACCTATTT CTATTGTGAAATCCATCATTGAGTTGGCTACAAATAGAAAATGTGACCTACCTGACTCAA TTGAGTTGTTGCGAAGGCGACTTGAAGGAGTCATTGACAGGAAAAGGTTTCTACTTGTTC TTGATGATGTATGGAATGAGGACGACAACAAGTGGAATGAACACCTAAGGCCACTTCTGA ATTCTGTCGGGGGTCCAGGGAGCATTATAGTCATCACAACTCGCAATCGGCGGGTGGCAT CTATAATGGAAACCCTTCAACCCTATAAGCCAGCATGTCTAAGTGAAGATGAATCATGGG AATTGTTCTCGAAGAGAGCGTTTGGTAGAGACGTACAAGAGCAAGAAGATTTGGTCACCA TTGGCAAATGTATTGTACATAAATGCAAGGGGCTGCCACTTGCTCTGAAGACGATGGGCG GTCTAATGAGTTCCAAACACCAAGTCAAGGAATGGGAAGCCATCGCAAGAAGTAATATTG GTGATAGTGTCAAAGGAAAAGACGAAATCTTATCAATACTAAAATTGAGCTACAAACACT TGCCATCTGAAATGAAACAATGCTTCACCTTCTGTGCAATTTTCTGCAAGGACTATGAGA TGGAGAAGGACATGTTGATCCAACTATGGATAGCAAATGGTTTTATTCAAGAAGAGGGCA CAATTGAGTTGTCACAAAAAGGCGAGTTTGTTTTCAATGAGTTGGTTTGGAGATCATTTC TTCAAGATGTTAAAACAATATTATTCAGAAGCTTAGATTATGACTTTGTTGTATGTAAAA TGCATGATTTAATGCATGACTTAGCAAAAGACGTTTCAAGTGAATGTGCAACTACAGAAG AACTGATTCAACAGAAAGCACCATCTGAAGATGTTTGGCATGTGCAAATATCAGAAGGTG AATTAAAACAAATCAGTGGATCATTCAAAGGGGAATTGAGGAGCTCAAACAGTTGAGATA CCTTACCAATATGTTGGGGCTGTACAATTTGAGAAAAATAAAGAGTACATCGAACGCGAA AGAAGCCAATCTCCATCAGAAACAAGAGCTGAGTATATTACGATTATTTTGGGGCTGCAT GTCATCCTACATGCCTGGAGACAAAGACAATAATGAGGAAGAAATGTTGGAATCTCTTAA ACCTCACAGCAAGCTTAAAATTTTGGATTTATATGGTTATGGTGGAAGTAAAGCCTCAGT GTGGATGAGAGACCCTCAAATGTTCCGGTGCTTAAAAAGGCTCATTATTGAACGATGTCC AAGATGTAAGGACATTCCAACAGTGTGGCTATCAGCCTCTCTTGAGTATTTGTCCTTGTC TTATATGACTAGTTTGATCTCATTATGTAAGAACATTGATGGGAACACCCCAGTGCAGTT ATTTCCAAAGTTGAAGGAGTTGATATTATTTGTTTTACCGAACTTGGAGAGGTGGGCAGA AAACAGTGAGGGGGAGAATAATGATGTGATCATTTTCCCGGAGCTTGAAAGCCTAGAATT GAAGAGTTGCATGAAAATTTCAAGTGTTCCGGAAAGCCCGGCTCTCAAAAGGCTGGAGGC TCTGGGGTGTCACAGCCTCTCAATTTTCTCACTTTCACATCTCACATCATTGTCTGACCT TTATTACAAAGCAGGTGATATTGACTCTATGAGGATGCCTTTGGACCCTTGTTGGGCTTC TCCCGTGAGCTTAGATGTTAGCTCACCAGCGAACATGATGGTGCCTCTGGAAGACAAGAA AAGCCGTAGACCCTTCGAAGCCCTACGGAGCTTGACTCTGCGTGGTTCTAACTGCTTCTT AGCAACGTGCAGTTTGTTTTTTGCCGGGACGGCCAAAGGTAGGCCGGCCAATTTCATTAA GATTGGGGGAAATAAAGTTTTAATTACAA