Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0542000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27123639:27127540:-1 gene:Os08g0542000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine aminopeptidase. (Os08t0542000-01)
Sequence	ATGGTTCGCGGTTCTGTTGATGTGGCAATCAAGGAGATGGAGGCTTTATGTATCGGACAA AATCAAGAAACCAAAGAGGAAGTCGGTTTTGAAACACAGGAGGCCTCATTAAAAGCAAGC AAAGTTGCAGATAGCAAAGGAGCTCCGTACTCACCACCAGAAAATGATGATGATGCAGAA GTGGACTATCCGTCTCAAGATGGAGCACAAGTAATAGCTGCCAAGAAGAAAAAGAAGAAA AGCAAAGCGAAAAAGAAGAAGGGACCTCTTCAGCAGACAGATCCTCCATCGATCCCTGTT GATGAACTCTTCCCATCAGGAGAATTTCCTGAGGGTGAGATCCAACACTATAAGGATGAT AACTTATGGAGGACAACTAGTGAAGAAAAGCGGGAACTGGAAAGATTGCAAAAGCCAATG TACAATGCTGTTCGTCGGGCAGCAGAAGTTCATAGACAGGTCCGGAAGTATATGAGAAGC ATTTTGAAGCCCGGGATGCTAATGATTGATCTATGTGAAACTTTGGAAAACATGGTCAGG AAACTTATCAAGGAGAATGGATTGGAAGCTGGTATTGCCTTTCCAACAGGATGCTCCTTG AATTGTGTTGCAGCTCACTGGACTCCAAATGGTGGTGATAAAACTGTACTACAATATGAT GATGTGATGAAGCTGGATTTTGGGACACATATAAATGGGTACATAGTTGATAGCGCATTC ACTGTTGCATTCAATCCCATGTTTGATCCATTGCTTCAAGCATCAAGAGATGCCACAAAT GCTGGTGTTAAGGAAGCTGGAATAGATGCACGGCTATGTGATGTTGGCGCAGCAATTCAA GAAGTCATGGAATCATATGAGGTTGAAATTAATGGAAAAGTATTCCAAGTAAAAAGTGTG CGGAACCTCAATGGACACGGCATTGGGCCATACCAAATCCATTTTGGGAAATCAGTTCCA GTTGTGAAAGGTGGTGAACAAACAAAGATGGAGGAGGGGGAATTTTATGCCATTGAAACT TTTGGATCTACAGGAAAGGGATATGTCAGGGAAGACTTAGAATGCAGCCATTATATGAAG AACTTTGATGTTGGCCATGTACCTTTGAGGGCAGCAAAAGCTAAGCAACTACTTGTGACG ATAAACAACAATTTCGGAACACTTGCCTTCTGCCGGAGGTATCTGGACCGGCTTGGTGAG ACCAAGTACCTCATGGCACTGAAAAATCTGTGCGATGCTGGCATTGTTGAGCCATGTCCT CCAATGTGTGATGTGAGGGGAAGCTATGTGTCACAATCTGAACACACCATTTTGCTCCGG CCAACCTGCAAGGAAGTCATATCCAGAGGTGATGATTATTGA

Peptide Sequence

PEP ID	Os08t0542000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27123639:27127540:-1 gene:Os08g0542000 transcript:Os08t0542000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine aminopeptidase. (Os08t0542000-01)
Sequence	MVRGSVDVAIKEMEALCIGQNQETKEEVGFETQEASLKASKVADSKGAPYSPPENDDDAE VDYPSQDGAQVIAAKKKKKKSKAKKKKGPLQQTDPPSIPVDELFPSGEFPEGEIQHYKDD NLWRTTSEEKRELERLQKPMYNAVRRAAEVHRQVRKYMRSILKPGMLMIDLCETLENMVR KLIKENGLEAGIAFPTGCSLNCVAAHWTPNGGDKTVLQYDDVMKLDFGTHINGYIVDSAF TVAFNPMFDPLLQASRDATNAGVKEAGIDARLCDVGAAIQEVMESYEVEINGKVFQVKSV RNLNGHGIGPYQIHFGKSVPVVKGGEQTKMEEGEFYAIETFGSTGKGYVREDLECSHYMK NFDVGHVPLRAAKAKQLLVTINNNFGTLAFCRRYLDRLGETKYLMALKNLCDAGIVEPCP PMCDVRGSYVSQSEHTILLRPTCKEVISRGDDY

Transcript Sequence

Transcript ID	Os08t0542000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27123639:27127540:-1 gene:Os08g0542000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine aminopeptidase. (Os08t0542000-01)
Sequence	ACTCAAAGGCAGCGGCGGCGAGCCACGCCTCCGCCGCTCTCTCCTGCTCTTCAGTCGGCG GGCGATCGCCGGCGGCTCTTCCGGCGAACTCGCGAGTCGCCCCCCCCCACCTCCCCTCTA GCCTGTACTAAGGAAGGCTTGTAATAATTTATTGGATTTTGATAATTTATTCGTGCAATA TGGTTCGCGGTTCTGTTGATGTGGCAATCAAGGAGATGGAGGCTTTATGTATCGGACAAA ATCAAGAAACCAAAGAGGAAGTCGGTTTTGAAACACAGGAGGCCTCATTAAAAGCAAGCA AAGTTGCAGATAGCAAAGGAGCTCCGTACTCACCACCAGAAAATGATGATGATGCAGAAG TGGACTATCCGTCTCAAGATGGAGCACAAGTAATAGCTGCCAAGAAGAAAAAGAAGAAAA GCAAAGCGAAAAAGAAGAAGGGACCTCTTCAGCAGACAGATCCTCCATCGATCCCTGTTG ATGAACTCTTCCCATCAGGAGAATTTCCTGAGGGTGAGATCCAACACTATAAGGATGATA ACTTATGGAGGACAACTAGTGAAGAAAAGCGGGAACTGGAAAGATTGCAAAAGCCAATGT ACAATGCTGTTCGTCGGGCAGCAGAAGTTCATAGACAGGTCCGGAAGTATATGAGAAGCA TTTTGAAGCCCGGGATGCTAATGATTGATCTATGTGAAACTTTGGAAAACATGGTCAGGA AACTTATCAAGGAGAATGGATTGGAAGCTGGTATTGCCTTTCCAACAGGATGCTCCTTGA ATTGTGTTGCAGCTCACTGGACTCCAAATGGTGGTGATAAAACTGTACTACAATATGATG ATGTGATGAAGCTGGATTTTGGGACACATATAAATGGGTACATAGTTGATAGCGCATTCA CTGTTGCATTCAATCCCATGTTTGATCCATTGCTTCAAGCATCAAGAGATGCCACAAATG CTGGTGTTAAGGAAGCTGGAATAGATGCACGGCTATGTGATGTTGGCGCAGCAATTCAAG AAGTCATGGAATCATATGAGGTTGAAATTAATGGAAAAGTATTCCAAGTAAAAAGTGTGC GGAACCTCAATGGACACGGCATTGGGCCATACCAAATCCATTTTGGGAAATCAGTTCCAG TTGTGAAAGGTGGTGAACAAACAAAGATGGAGGAGGGGGAATTTTATGCCATTGAAACTT TTGGATCTACAGGAAAGGGATATGTCAGGGAAGACTTAGAATGCAGCCATTATATGAAGA ACTTTGATGTTGGCCATGTACCTTTGAGGGCAGCAAAAGCTAAGCAACTACTTGTGACGA TAAACAACAATTTCGGAACACTTGCCTTCTGCCGGAGGTATCTGGACCGGCTTGGTGAGA CCAAGTACCTCATGGCACTGAAAAATCTGTGCGATGCTGGCATTGTTGAGCCATGTCCTC CAATGTGTGATGTGAGGGGAAGCTATGTGTCACAATCTGAACACACCATTTTGCTCCGGC CAACCTGCAAGGAAGTCATATCCAGAGGTGATGATTATTGATTGCAATGGCTGTCCCTCT TGTACTGGTTTTGTGAGATCATTGCTCGCCATTTTTTATTTTGGGAAACCTGTATACACT GTTGTATGTATCATATGATATCACTATCATAAGATAAATAATGTGCAGTAAGCACCGTTT GTTGCTGCTGCTGCTTACCACTTGGCAGTTGGTACTCTTTAAATAATTTTTAGTGGAAGC TTGATACTATTTCGAAGCATAGTCTTCATTTTGCTG