Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0540500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27064824:27068182:1 gene:Os08g0540500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bicoid-interacting 3 domain containing protein. (Os08t0540500-01)
Sequence	ATGGCCACCACCACCGCGCCGGAGGACGCGCCGTCCGCGGCCAAGGGGGCTAAAGGAGAG GCGAAGAGGAAACAGAGCAACTGGCGTGGGGGAGGAGGAGGCGGCGGCGGCCGCGGCGAC GGGGGTCAGGGGCAGAAGCGGAAGAGGAAGGAGGTATTCGTCTACGGGAACTACAGGAAC TACTACGGCTACCGGATTGACCGTAATGTTGATGAAGACCCTCGTCTTAAAATATTTAAG AGAGAGTGGTTTGAAAGCAAGGATTGTCTTGATATTGGATGCAACCAGGGTTTGGTAACG ATTGGTCTAGCTGCGAAATTTAAATGCCAAAGCATTCTTGGAGTTGATATTGATTCAGGT TTGATCGAAACTGCCAACTGGAATTTAAGAAGGATGTCTCGACTGGATAAGGTGGTTGTA GAAAACACCAAGGCTCACAAGTCATCAGATTCACCGTCTGAAAGCTGTCCGGAAAAAGTG GCACCTGAGATATCAAATGGGGATATTTCTAATGGCAGTCATCATGATATTTTTAAAGTT GTTTCTTTTCGTCGCGAGAATTTTGTGGACAGCATGTGTACAAGTTCAGAACAGTATGAT ACAATTGTTTGTTTGAGTGTGACCAAATGGATCCACCTGAACTGGGGTGACGATGGCATA ATTACTTTATTTGTGAAGATCTGGAGACTTCTAAGACCGGGTGGAGTTTTTATTATGGAG CCTCAACCTTGGACCTCATATAGGAGAAACAGATTGGTTTCAGAGGTTGCCAAAGAGAAC TTCAATACCATCCTAATACATCCAGATAAATTCCGGGAGATACTTCTAGACAAGATCGGA TTCAGGTCGGTAGAGGTGGTTACGGACAAACTGGAGGGCGCTGTTACTGGTTTTGACCGC CCAATCGAAGTTTACCACAAAGTGATGGGAACTGGATCAAGTTCTTGA

Peptide Sequence

PEP ID	Os08t0540500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27064824:27068182:1 gene:Os08g0540500 transcript:Os08t0540500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bicoid-interacting 3 domain containing protein. (Os08t0540500-01)
Sequence	MATTTAPEDAPSAAKGAKGEAKRKQSNWRGGGGGGGGRGDGGQGQKRKRKEVFVYGNYRN YYGYRIDRNVDEDPRLKIFKREWFESKDCLDIGCNQGLVTIGLAAKFKCQSILGVDIDSG LIETANWNLRRMSRLDKVVVENTKAHKSSDSPSESCPEKVAPEISNGDISNGSHHDIFKV VSFRRENFVDSMCTSSEQYDTIVCLSVTKWIHLNWGDDGIITLFVKIWRLLRPGGVFIME PQPWTSYRRNRLVSEVAKENFNTILIHPDKFREILLDKIGFRSVEVVTDKLEGAVTGFDR PIEVYHKVMGTGSSS

Transcript Sequence

Transcript ID	Os08t0540500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27064824:27068182:1 gene:Os08g0540500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Bicoid-interacting 3 domain containing protein. (Os08t0540500-01)
Sequence	AAGTCGGCGGCGAGGGTTTCGTCTCCTTCTCGCCGCTTTGTCCCGCGCTGTTCCCCTCTC GTTTCAGCTCCAGCACGAACCGCGCCGCGGCGGCGGCGGCGAGAGAGGCGTCTCTTCTCC GAGCATGGCCACCACCACCGCGCCGGAGGACGCGCCGTCCGCGGCCAAGGGGGCTAAAGG AGAGGCGAAGAGGAAACAGAGCAACTGGCGTGGGGGAGGAGGAGGCGGCGGCGGCCGCGG CGACGGGGGTCAGGGGCAGAAGCGGAAGAGGAAGGAGGTATTCGTCTACGGGAACTACAG GAACTACTACGGCTACCGGATTGACCGTAATGTTGATGAAGACCCTCGTCTTAAAATATT TAAGAGAGAGTGGTTTGAAAGCAAGGATTGTCTTGATATTGGATGCAACCAGGGTTTGGT AACGATTGGTCTAGCTGCGAAATTTAAATGCCAAAGCATTCTTGGAGTTGATATTGATTC AGGTTTGATCGAAACTGCCAACTGGAATTTAAGAAGGATGTCTCGACTGGATAAGGTGGT TGTAGAAAACACCAAGGCTCACAAGTCATCAGATTCACCGTCTGAAAGCTGTCCGGAAAA AGTGGCACCTGAGATATCAAATGGGGATATTTCTAATGGCAGTCATCATGATATTTTTAA AGTTGTTTCTTTTCGTCGCGAGAATTTTGTGGACAGCATGTGTACAAGTTCAGAACAGTA TGATACAATTGTTTGTTTGAGTGTGACCAAATGGATCCACCTGAACTGGGGTGACGATGG CATAATTACTTTATTTGTGAAGATCTGGAGACTTCTAAGACCGGGTGGAGTTTTTATTAT GGAGCCTCAACCTTGGACCTCATATAGGAGAAACAGATTGGTTTCAGAGGTTGCCAAAGA GAACTTCAATACCATCCTAATACATCCAGATAAATTCCGGGAGATACTTCTAGACAAGAT CGGATTCAGGTCGGTAGAGGTGGTTACGGACAAACTGGAGGGCGCTGTTACTGGTTTTGA CCGCCCAATCGAAGTTTACCACAAAGTGATGGGAACTGGATCAAGTTCTTGACATTTCCT GCCAAAGGCATATGTGGTGCTTCAGATGTGCAGCTTGTTTTAGTGGGATTCATTGAGCTC CATGACGCTTTCTTCCATTCGACAAACTTCAACGATGGCGCCCTCACATACCGCTGGATT TGCATTTGCAGAAGACTATTTGAACGCCCAAGGAATGAGATGGGTAGATTGGAACTGTTG GTACGTCCTCTTTGGAAGTTTTGACATTTTGTAGGACGATCGATCGGTTTCCAAAAAAAA AAAAAACATTTTGTAGGTCGAGGCAGTTTTGCCTGTGTAAATGAATGGTGGATACGTACG TATGAAAAATATTGTTCCTCGAGGAAA