Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0540400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:27055091:27059334:-1 gene:Os08g0540400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 21 description:Similar to Calcium-dependent protein kinase. (Os08t0540400-01)
Sequence	ATGGGGGGCTGCTACTCCGCCTACGCCTCCTCGCGCAAGCTGCGCGGCCGCATCAGCAAG ATCTCCCTCGTCATCCCCGACCCGGTCCCCGACGCCGAGGCCGCCTCGCCGCGCAAGGAC GGCGTCGATGGCGACGGCGACGACGTGAGGGGTGGTGGTGGTGGCTGTGACGATGGCGGT GACGTCGTCGCCATCGCGACGACGACGGCGGACGAGTTCGCGCGGCGGTACGTGCTGGGG AAGGAGCTGGGGCGCGGGGAGTTCGGGGTGACGCGGCGGTGCAGCGACGCGGCGACCGGG GAGGCGCTGGCGTGCAAGACGATCCGGAAGCACAGGCGCCTGGCGCCGCCGCGGGTGACC GCGGCGAAGGCGGCGGCCGCGCACGGGGAGGACGTGAAGAGGGAGGTGGCCATCATGCGG CGCATGTCGTCGGCGTCGTCGTCGCGCGGGGGCGGCGCCGCGTCGTCCGCCGCCGTGGTG CGGCTCCGCGAGGCATGCGAGGACGCCGCCGACGGCTCCGTCCACCTCGTCATGGAGCTC TGCGAGGGCGGCGAGCTGTTCGACCGCATCGTGGCGCGCGGACACTACTCCGAGCGCGCC GCCGCCAACATCTTCCGCACCATCGTCGACGTCGTCCAGCTGTGCCACTCGAACGGGGTG ATACACCGCGATCTGAAGCCGGAGAACTTCCTGTTCGCGAACAAATCGGAGGACTCGCCG CTCAAGGTCATCGACTTCGGCCTCTCGGTGTTCTTCAAGCCAGGCGACCGGTTCACGGAG GTGGTGGGGAGCGCGTACTACATGGCGCCGGAGGTATTGCGGCGGAGCTACGGGCCGGAG GTGGACGTGTGGAGCGCCGGCGTCATCCTCTACATCCTCCTCTGCGGCGTCCCTCCATTC TGGGGAGACAACGACGAGAAGATCGCGCAGGCGATCCTCCGCGGCGCCATCGACTTCAAC AGGGAGCCATTGCCGAGGGTCTCCGCCAACGCCAAGGACCTCGTCAGGAGGATGCTTGAT CCTAACCCATCCACCCGCCTGACGGCCAAACAAGTTCTTGAGCATCCATGGCTGAAGAAC GCGGACACGGCGCCGAACGTGTCGCTGGGCGACGCCGTGCGGGCGAGGCTGCAGCAGTTC TCCGCCATGAACAAGTTCAAGAAGAAGGCTCTCGGAGTGGTGGCGCGGAACCTGCCGGGG GAGGAGGTGGACAAGTACGTGCAGATGTTCCACCACATGGACAAGGACAAGAACGGGCAC CTGTCGCTCGACGAACTCTTGGAAGGCCTCCACATCAACGGCCAGCCCGTCCCCGAGCCC GAGATCAGGATGCTACTCGAAGCCGCGGACACGGACGGGAACGGGACGCTGGACTGCGAC GAGTTCGTGACGGTGTCGGTGCACCTGAAGAAGATGAGCAACGACGAGTACCTGGCGGCG GCGTTCAACTACTTCGACAAGGACGGCAGCGGGTTCATCGAGCTGGACGAGCTGCGGGAG GAGGTGGGCCCAAACGAGCAGGCCATCCTGGAGATCCTCCGCGACGTCGACACCGACAAG GACGGCCGCATCAGCTACCAGGAGTTCGAGCTCATGATGAAGTCCGGCGCCGACTGGAGG AACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCAGCAGGAGGCTCTGCAAG GATACTCTTACTCCCTGA

Peptide Sequence

PEP ID	Os08t0540400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:27055091:27059334:-1 gene:Os08g0540400 transcript:Os08t0540400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 21 description:Similar to Calcium-dependent protein kinase. (Os08t0540400-01)
Sequence	MGGCYSAYASSRKLRGRISKISLVIPDPVPDAEAASPRKDGVDGDGDDVRGGGGGCDDGG DVVAIATTTADEFARRYVLGKELGRGEFGVTRRCSDAATGEALACKTIRKHRRLAPPRVT AAKAAAAHGEDVKREVAIMRRMSSASSSRGGGAASSAAVVRLREACEDAADGSVHLVMEL CEGGELFDRIVARGHYSERAAANIFRTIVDVVQLCHSNGVIHRDLKPENFLFANKSEDSP LKVIDFGLSVFFKPGDRFTEVVGSAYYMAPEVLRRSYGPEVDVWSAGVILYILLCGVPPF WGDNDEKIAQAILRGAIDFNREPLPRVSANAKDLVRRMLDPNPSTRLTAKQVLEHPWLKN ADTAPNVSLGDAVRARLQQFSAMNKFKKKALGVVARNLPGEEVDKYVQMFHHMDKDKNGH LSLDELLEGLHINGQPVPEPEIRMLLEAADTDGNGTLDCDEFVTVSVHLKKMSNDEYLAA AFNYFDKDGSGFIELDELREEVGPNEQAILEILRDVDTDKDGRISYQEFELMMKSGADWR NASRHFSRANFSTLSRRLCKDTLTP

Transcript Sequence

Transcript ID	Os08t0540400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:27055091:27059334:-1 gene:Os08g0540400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 21 description:Similar to Calcium-dependent protein kinase. (Os08t0540400-01)
Sequence	GCGAGCCGCGCGAGCGCGACACACACAGAGGAGGAGGCCGCGCGCGCGACGCGAGCTCGC CCTCTGCGTGCGCCGCCGCGAGGTCGCCGCCGCCGCCGCCGCCGTCGATCGGCGCCCGAT CGATGGGGGGCTGCTACTCCGCCTACGCCTCCTCGCGCAAGCTGCGCGGCCGCATCAGCA AGATCTCCCTCGTCATCCCCGACCCGGTCCCCGACGCCGAGGCCGCCTCGCCGCGCAAGG ACGGCGTCGATGGCGACGGCGACGACGTGAGGGGTGGTGGTGGTGGCTGTGACGATGGCG GTGACGTCGTCGCCATCGCGACGACGACGGCGGACGAGTTCGCGCGGCGGTACGTGCTGG GGAAGGAGCTGGGGCGCGGGGAGTTCGGGGTGACGCGGCGGTGCAGCGACGCGGCGACCG GGGAGGCGCTGGCGTGCAAGACGATCCGGAAGCACAGGCGCCTGGCGCCGCCGCGGGTGA CCGCGGCGAAGGCGGCGGCCGCGCACGGGGAGGACGTGAAGAGGGAGGTGGCCATCATGC GGCGCATGTCGTCGGCGTCGTCGTCGCGCGGGGGCGGCGCCGCGTCGTCCGCCGCCGTGG TGCGGCTCCGCGAGGCATGCGAGGACGCCGCCGACGGCTCCGTCCACCTCGTCATGGAGC TCTGCGAGGGCGGCGAGCTGTTCGACCGCATCGTGGCGCGCGGACACTACTCCGAGCGCG CCGCCGCCAACATCTTCCGCACCATCGTCGACGTCGTCCAGCTGTGCCACTCGAACGGGG TGATACACCGCGATCTGAAGCCGGAGAACTTCCTGTTCGCGAACAAATCGGAGGACTCGC CGCTCAAGGTCATCGACTTCGGCCTCTCGGTGTTCTTCAAGCCAGGCGACCGGTTCACGG AGGTGGTGGGGAGCGCGTACTACATGGCGCCGGAGGTATTGCGGCGGAGCTACGGGCCGG AGGTGGACGTGTGGAGCGCCGGCGTCATCCTCTACATCCTCCTCTGCGGCGTCCCTCCAT TCTGGGGAGACAACGACGAGAAGATCGCGCAGGCGATCCTCCGCGGCGCCATCGACTTCA ACAGGGAGCCATTGCCGAGGGTCTCCGCCAACGCCAAGGACCTCGTCAGGAGGATGCTTG ATCCTAACCCATCCACCCGCCTGACGGCCAAACAAGTTCTTGAGCATCCATGGCTGAAGA ACGCGGACACGGCGCCGAACGTGTCGCTGGGCGACGCCGTGCGGGCGAGGCTGCAGCAGT TCTCCGCCATGAACAAGTTCAAGAAGAAGGCTCTCGGAGTGGTGGCGCGGAACCTGCCGG GGGAGGAGGTGGACAAGTACGTGCAGATGTTCCACCACATGGACAAGGACAAGAACGGGC ACCTGTCGCTCGACGAACTCTTGGAAGGCCTCCACATCAACGGCCAGCCCGTCCCCGAGC CCGAGATCAGGATGCTACTCGAAGCCGCGGACACGGACGGGAACGGGACGCTGGACTGCG ACGAGTTCGTGACGGTGTCGGTGCACCTGAAGAAGATGAGCAACGACGAGTACCTGGCGG CGGCGTTCAACTACTTCGACAAGGACGGCAGCGGGTTCATCGAGCTGGACGAGCTGCGGG AGGAGGTGGGCCCAAACGAGCAGGCCATCCTGGAGATCCTCCGCGACGTCGACACCGACA AGGACGGCCGCATCAGCTACCAGGAGTTCGAGCTCATGATGAAGTCCGGCGCCGACTGGA GGAACGCCTCCAGGCACTTCTCCAGGGCCAACTTCAGCACCCTCAGCAGGAGGCTCTGCA AGGATACTCTTACTCCCTGATGATCGATGATGCCCAACAATCTCATCAACTTTGTTTCAT CAAGGCTTATAAACTGCACATCTTTCACCTTCACCAGACAGGGATAACTAGAGAGAGATA CAAGACCAACTTAGAGAAATGTATTGGAGTGGCAACACGATGCGATGCTGCGCTTGGATT GTGAAATGAGAAATGGAACTGAAATGGGGATCGTACCGGTTTTGCT