Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0538700-02
CDS Infomation	cds chromosome:IRGSP-1.0:8:26922241:26928260:-1 gene:Os08g0538700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:retinoblastoma protein homolog 2, etinoblastoma-related 2, retinoblastoma-related protein-1 description:Retinoblastoma-related protein. (Os08t0538700-01);Retinoblastoma-related protein. (Os08t0538700-02)
Sequence	ATGGAGGGTGCCGCGCCGCCAGCGAGCTCCGGGTCGGAGGTGACGGGTGCGGGCTCGGGG AAGGTGGACGCTGGCGGCGGCGCCGCCATGGAGGAGCGGTTCGCCGATCTGTGCAAGAGC AAGCTTGGGCTGGACGAGAGCATAACGAGGCAGGCAATGCAGCTGTTCAAGGAGAGCAAG AGCATCCTCCTATCCAGCATGTCATCCTTGGGCAGTGGATCGCCTGAGGAGATCGAGAGG TTCTGGTCTGCTTTTGTTCTTTACTGTGTGTCAAGGCTTGGCAAAGCAGGCAAAGGGAAG GAAGATGGTGGCATCTCACTGTGCCAGATATTGAGGGCATTTAGTCTGAACATCGTCGAT TTCTTCAAGGAGATGCCACAGTTCTGCATAAAGGTTGGGTCTGTTCTGGCTGGTCTATAT GGTTCAGATTGGGAGAAGAGGCTTGAGTTGAAGGAACTGCAAGCGAATGTCGTCCATTTA AGCCTGCTAAGCAGGTACTACAAGCGTGCCTACCAGGAGCTGTTCCTATTAAATGATGCC AAGCCACCAGAAAATTCTGCAGAACCAAATGCACAAGCCTCTGACTATTATCGCTTTGGA TGGTTACTTTTCTTGGTGTTAAGAATCCAAACATTCAGCCGATTTAAGGATCTTGTTACA TCCACAAATGGACTAGTTTCTGTGTTGGCCGTACTTATTGTTCACATTCCTGTGCGGCTA AGGAATTTCAATATCAAAGAGTCTTCTAGTTTTGCCAAGAAGTCAGACAAGGGAGTAAAT CTTATTGCTTCCCTATGTGAAAAATACCATACATCAGAAGATGAGTTGAGTAAAGCAATC GAGAAGACAAATACTCTCATAGTGGATATTCTGAAGAAGAAACCATGTCCAGCTGCTTCA GAATGTCAGCAGGATAGGTTGTCTTTTATTGATCCAGAGGGCTTGACATATTTTAAGAAT TTGCTCGAGGAAGACTCATTGAAATTAAGTTTGCTAATGCTGGAAAAGGAATATGAGAAT GCAATTAACACCAAGGGAGAATTAGATGAGCGCATGTTCGCAAACGATGAGGACAGCTTG CTTGGCAGTGGAAGTCTGTCAGGAGGTGCCATCAATTTACCAGGCACAAAGAGAAAGTAC GATGTTATGGCCTCACCTGCAAAATCAATAACAAGTCCAAGTCCGATGTCTCCTCCACGG TTTTGTGCATCCCCTACTGGAAATGGCTACTGCAGCTCAAAAATGGCTCCTATCACCCCA GTGAGCACAGCCATGACAACAGCCAAGTGGCTTCGGAGCACAATCTCTCCCCTTCCTTCA AAACCTTCCGGGGAGTTACTGCGCTTCTTCTCAGCTTGTGATAAGGATGTGACAGATGAC ATTACACGCAGAGCTGGTATTATACTTGGAGCCATATTCACAAGCAGTTCTTTCGGCGAA CGTATATGTACCAGCGTGCGAAGCACAAACAGGATTGATGCTATCTGGACAGAGCAAAGA AAAATGGAAGCACTTAAGCTATATTACAGGGTTCTGGAATCAATGTGCAGAGCAGAGACT CAGATCTTGAGTGGGAACAATCTTACATCGCTTCTGTCTAATGAGCGATTCCATCGGTGT ATGATTGCTTGTTCTGCTGAGTTAGTGCTGGCCACTCACAAGACAGTCACAATGATGTTC CCAGCTGTGTTAGAGAAAACTGGCATAACAGCTTTTGACTTGAGCAAAGTCATAGAGAGT TTTGTTAGGCATGAGGATACACTTCCACGAGAGCTGAAACGTCATTTGAATTCACTTGAG GAACGGCTCCTGGAAAGCATGGCATGGGAGAAAGGCTCATCAATGTACAATTCTCTGATT GTTGCCAGGCCAACACTATCTGCAGAAATAAACAGGCTAGGTTTATTGGCTGAACCAATG CCATCACTTGATGCCATTGCGGCGCACCATAACATTTCACTCGAGGGGCTGCCACCTCTT CCCTTTCAAAAGCAAGAACATTCACCAGACAAGGATGAAGTTAGATCTCCCAAAAGAGCA TGCACTGAAAGGAGGAATGTGCTGGTGGACAACAATTCATTTAGATCACCAGTCAAGGAT ACCCTCAAATCAAAGTTGCCTCCTCTCCAATCAGCATTTTTAAGTCCAACAAGACCTAAT CCTGCAGCAGGGGGAGAATTATGCGCAGAGACAGGAATAGGTGTATTTTTGAGCAAGATA GCAAAGCTTGCAGCTATTAGAATCAGAGGTCTTTGTGAAAGGCTGCAACTTTCTCAGCAA GTCTTGGAGCGAGTGTACTCCCTTGTGCAACAAATCATTATCCAACAAACTGCTCTATTT TTCAATCGGCACATCGATCAGATTATACTATGCAGCATATATGGAGTTGCTAAGATATCT CAATTGGCACTGACATTCAAGGAAATTATTTTCGGCTACAGAAAACAATCTCAGTGCAAG CCACAAGTTTTCCGTAGTGTTTATGTTCATTGGGCATCACGAAGCCGCAATGGGAAAACA GGGGAGGACCATGTTGACATTATCACTTTCTACAACGAAGTATTTATTCCTACTGTGAAA CCTTTGCTGGTTGAGCTAGGGTCTGGTACTAGTCCAAACAAGAAGAATGAGGAAAAATGT GCTGCTGATGGTCCATATCCAGAATCTCCTCGGCTATCTCGGTTTCCAAACCTTCCTGAC ATGTCTCCCAAGAAAGTTTCTGCTGCTCATAACGTATATGTTTCACCCTTGCGCACATCA AAGATGGATACTTTGCTTTCCCCAAGCTCCAAGAGCTATTACGCCTGTGTAGGGGAGAGT ACTCATGCATTTCAGAGCCCCTCCAAGGACCTTAAGGTTATAAACAACCGCCTAAACAGT GGGAAGAAAGTCAGTGGAAGACTGAACTTTGATGTTGTCAGTGATTTGGTTGTTGCCAGA AGTCTCAGCGATCAAAATAGCGCATCAGCAGCAGCAACAACAGCAGATATCGCCACAAAA ACACCAGTGAAATTGGAGCAGCCAGACTGCTAG

Peptide Sequence

PEP ID	Os08t0538700-02
PEP Infomation	pep chromosome:IRGSP-1.0:8:26922241:26928260:-1 gene:Os08g0538700 transcript:Os08t0538700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:retinoblastoma protein homolog 2, etinoblastoma-related 2, retinoblastoma-related protein-1 description:Retinoblastoma-related protein. (Os08t0538700-01);Retinoblastoma-related protein. (Os08t0538700-02)
Sequence	MEGAAPPASSGSEVTGAGSGKVDAGGGAAMEERFADLCKSKLGLDESITRQAMQLFKESK SILLSSMSSLGSGSPEEIERFWSAFVLYCVSRLGKAGKGKEDGGISLCQILRAFSLNIVD FFKEMPQFCIKVGSVLAGLYGSDWEKRLELKELQANVVHLSLLSRYYKRAYQELFLLNDA KPPENSAEPNAQASDYYRFGWLLFLVLRIQTFSRFKDLVTSTNGLVSVLAVLIVHIPVRL RNFNIKESSSFAKKSDKGVNLIASLCEKYHTSEDELSKAIEKTNTLIVDILKKKPCPAAS ECQQDRLSFIDPEGLTYFKNLLEEDSLKLSLLMLEKEYENAINTKGELDERMFANDEDSL LGSGSLSGGAINLPGTKRKYDVMASPAKSITSPSPMSPPRFCASPTGNGYCSSKMAPITP VSTAMTTAKWLRSTISPLPSKPSGELLRFFSACDKDVTDDITRRAGIILGAIFTSSSFGE RICTSVRSTNRIDAIWTEQRKMEALKLYYRVLESMCRAETQILSGNNLTSLLSNERFHRC MIACSAELVLATHKTVTMMFPAVLEKTGITAFDLSKVIESFVRHEDTLPRELKRHLNSLE ERLLESMAWEKGSSMYNSLIVARPTLSAEINRLGLLAEPMPSLDAIAAHHNISLEGLPPL PFQKQEHSPDKDEVRSPKRACTERRNVLVDNNSFRSPVKDTLKSKLPPLQSAFLSPTRPN PAAGGELCAETGIGVFLSKIAKLAAIRIRGLCERLQLSQQVLERVYSLVQQIIIQQTALF FNRHIDQIILCSIYGVAKISQLALTFKEIIFGYRKQSQCKPQVFRSVYVHWASRSRNGKT GEDHVDIITFYNEVFIPTVKPLLVELGSGTSPNKKNEEKCAADGPYPESPRLSRFPNLPD MSPKKVSAAHNVYVSPLRTSKMDTLLSPSSKSYYACVGESTHAFQSPSKDLKVINNRLNS GKKVSGRLNFDVVSDLVVARSLSDQNSASAAATTADIATKTPVKLEQPDC

Transcript Sequence

Transcript ID	Os08t0538700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26922241:26928260:-1 gene:Os08g0538700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:retinoblastoma protein homolog 2, etinoblastoma-related 2, retinoblastoma-related protein-1 description:Retinoblastoma-related protein. (Os08t0538700-01);Retinoblastoma-related protein. (Os08t0538700-02)
Sequence	GCGCAGGCGAGCGCAACCCTAGCTGCAGGCAGCGCAGGCAGGAGGGCTCGTTCGTCGTCT CCTCCCACCGCCGCTCGCGGGAGAGACTCTGGTTTTTTTTGGGGGGAGTTTGGTTGGTTG GTGGTGTTCTTGACGGGGCATGGAGGGTGCCGCGCCGCCAGCGAGCTCCGGGTCGGAGGT GACGGGTGCGGGCTCGGGGAAGGTGGACGCTGGCGGCGGCGCCGCCATGGAGGAGCGGTT CGCCGATCTGTGCAAGAGCAAGCTTGGGCTGGACGAGAGCATAACGAGGCAGGCAATGCA GCTGTTCAAGGAGAGCAAGAGCATCCTCCTATCCAGCATGTCATCCTTGGGCAGTGGATC GCCTGAGGAGATCGAGAGGTTCTGGTCTGCTTTTGTTCTTTACTGTGTGTCAAGGCTTGG CAAAGCAGGCAAAGGGAAGGAAGATGGTGGCATCTCACTGTGCCAGATATTGAGGGCATT TAGTCTGAACATCGTCGATTTCTTCAAGGAGATGCCACAGTTCTGCATAAAGGTTGGGTC TGTTCTGGCTGGTCTATATGGTTCAGATTGGGAGAAGAGGCTTGAGTTGAAGGAACTGCA AGCGAATGTCGTCCATTTAAGCCTGCTAAGCAGGTACTACAAGCGTGCCTACCAGGAGCT GTTCCTATTAAATGATGCCAAGCCACCAGAAAATTCTGCAGAACCAAATGCACAAGCCTC TGACTATTATCGCTTTGGATGGTTACTTTTCTTGGTGTTAAGAATCCAAACATTCAGCCG ATTTAAGGATCTTGTTACATCCACAAATGGACTAGTTTCTGTGTTGGCCGTACTTATTGT TCACATTCCTGTGCGGCTAAGGAATTTCAATATCAAAGAGTCTTCTAGTTTTGCCAAGAA GTCAGACAAGGGAGTAAATCTTATTGCTTCCCTATGTGAAAAATACCATACATCAGAAGA TGAGTTGAGTAAAGCAATCGAGAAGACAAATACTCTCATAGTGGATATTCTGAAGAAGAA ACCATGTCCAGCTGCTTCAGAATGTCAGCAGGATAGGTTGTCTTTTATTGATCCAGAGGG CTTGACATATTTTAAGAATTTGCTCGAGGAAGACTCATTGAAATTAAGTTTGCTAATGCT GGAAAAGGAATATGAGAATGCAATTAACACCAAGGGAGAATTAGATGAGCGCATGTTCGC AAACGATGAGGACAGCTTGCTTGGCAGTGGAAGTCTGTCAGGAGGTGCCATCAATTTACC AGGCACAAAGAGAAAGTACGATGTTATGGCCTCACCTGCAAAATCAATAACAAGTCCAAG TCCGATGTCTCCTCCACGGTTTTGTGCATCCCCTACTGGAAATGGCTACTGCAGCTCAAA AATGGCTCCTATCACCCCAGTGAGCACAGCCATGACAACAGCCAAGTGGCTTCGGAGCAC AATCTCTCCCCTTCCTTCAAAACCTTCCGGGGAGTTACTGCGCTTCTTCTCAGCTTGTGA TAAGGATGTGACAGATGACATTACACGCAGAGCTGGTATTATACTTGGAGCCATATTCAC AAGCAGTTCTTTCGGCGAACGTATATGTACCAGCGTGCGAAGCACAAACAGGATTGATGC TATCTGGACAGAGCAAAGAAAAATGGAAGCACTTAAGCTATATTACAGGGTTCTGGAATC AATGTGCAGAGCAGAGACTCAGATCTTGAGTGGGAACAATCTTACATCGCTTCTGTCTAA TGAGCGATTCCATCGGTGTATGATTGCTTGTTCTGCTGAGTTAGTGCTGGCCACTCACAA GACAGTCACAATGATGTTCCCAGCTGTGTTAGAGAAAACTGGCATAACAGCTTTTGACTT GAGCAAAGTCATAGAGAGTTTTGTTAGGCATGAGGATACACTTCCACGAGAGCTGAAACG TCATTTGAATTCACTTGAGGAACGGCTCCTGGAAAGCATGGCATGGGAGAAAGGCTCATC AATGTACAATTCTCTGATTGTTGCCAGGCCAACACTATCTGCAGAAATAAACAGGCTAGG TTTATTGGCTGAACCAATGCCATCACTTGATGCCATTGCGGCGCACCATAACATTTCACT CGAGGGGCTGCCACCTCTTCCCTTTCAAAAGCAAGAACATTCACCAGACAAGGATGAAGT TAGATCTCCCAAAAGAGCATGCACTGAAAGGAGGAATGTGCTGGTGGACAACAATTCATT TAGATCACCAGTCAAGGATACCCTCAAATCAAAGTTGCCTCCTCTCCAATCAGCATTTTT AAGTCCAACAAGACCTAATCCTGCAGCAGGGGGAGAATTATGCGCAGAGACAGGAATAGG TGTATTTTTGAGCAAGATAGCAAAGCTTGCAGCTATTAGAATCAGAGGTCTTTGTGAAAG GCTGCAACTTTCTCAGCAAGTCTTGGAGCGAGTGTACTCCCTTGTGCAACAAATCATTAT CCAACAAACTGCTCTATTTTTCAATCGGCACATCGATCAGATTATACTATGCAGCATATA TGGAGTTGCTAAGATATCTCAATTGGCACTGACATTCAAGGAAATTATTTTCGGCTACAG AAAACAATCTCAGTGCAAGCCACAAGTTTTCCGTAGTGTTTATGTTCATTGGGCATCACG AAGCCGCAATGGGAAAACAGGGGAGGACCATGTTGACATTATCACTTTCTACAACGAAGT ATTTATTCCTACTGTGAAACCTTTGCTGGTTGAGCTAGGGTCTGGTACTAGTCCAAACAA GAAGAATGAGGAAAAATGTGCTGCTGATGGTCCATATCCAGAATCTCCTCGGCTATCTCG GTTTCCAAACCTTCCTGACATGTCTCCCAAGAAAGTTTCTGCTGCTCATAACGTATATGT TTCACCCTTGCGCACATCAAAGATGGATACTTTGCTTTCCCCAAGCTCCAAGAGCTATTA CGCCTGTGTAGGGGAGAGTACTCATGCATTTCAGAGCCCCTCCAAGGACCTTAAGGTTAT AAACAACCGCCTAAACAGTGGGAAGAAAGTCAGTGGAAGACTGAACTTTGATGTTGTCAG TGATTTGGTTGTTGCCAGAAGTCTCAGCGATCAAAATAGCGCATCAGCAGCAGCAACAAC AGCAGATATCGCCACAAAAACACCAGTGAAATTGGAGCAGCCAGACTGCTAGTTGTTTCA GTTATACCACATCACCTGTCCAATACAACCTACTGACGGAAATGCTAATCTGTTAGGTGT CAGCTGATCTAATAGTTAGATGTTCAGAAGCTCCATTTTCTCTGTTTATGTTTCCTGACA TGGGGAAATTTCCTCAGTGAGCAGCTCTTGTCTTCTGTCACATATAAAAGAGCTGCCCTG AGACCCCCTAATTAACCTGCCTCACTTTACTTCTGCTTTTTCTCTTTGAAGAGTTGATAC TACAGTCATGTAATGTAGTAGCAAGTTTAACAGCTTTTGTAAATGAAATTTGGCTCTTG