Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0538300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26909127:26913492:1 gene:Os08g0538300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitin elicitor receptor kinase 1, chitinelicitor receptor kinase-1, LysM receptor-like kinase 9 description:LysM receptor-like kinase, Chitin elicitor signaling (Os08t0538300-01);Similar to LysM receptor-like kinase. (Os08t0538300-02)
Sequence	ATGGAAGCTTCCACCTCCCTCCTAGTCCTCGTCCTCGCCGCCGCGGCGTTCGCGGCGGGG ACGGTGACGGAGGCGGCGGGGGACGGGTGCAGCGCCGGGTGCGACCTCGCGCTGGCTTCC TTCTACGTGACGCCGAACCAGAACGTCACCAACATGGCGGATCTCTTCGGCATCGGCGCG GCGAACTACCGCAGCCTCGCGCCCTACAACCCGAACATCCCCAACCTCGACTTCATCAAC GTCGGCGGCCGCGTCAACGTCTACTTCACCTGCGGCTGCCGCTCGCTGCCGGGCTCGCCG GGAGCCACCTACCTCGCCGGCGCCTTCCCCTTCCAGATGTCCCGCGGCCAGATCTACACC TCCGTCGCCGCCAACTACAACAACCTCACCACCGCCGAGTGGCTGCAGGCCACCAACAGC TACCCGGCCAACAACATCCCGGACACCGCCGTCATCAACGCCACCGTCAACTGCTCCTGC GGCGACGCCAGCATCTCGCCGGACTACGGGCTGTTCCTCACCTACCCGCTCCGCGCCGAG GATACGCTCGCCTCCGTCGCGGCGACCTACGGGCTCTCGTCGCAGCTGGACGTGGTCAGG AGGTACAACCCGGGGATGGAGAGCGCCACGGGGAGTGGAATCGTGTACATCCCCGTCAAA GATCCCAATGGAAGTTACCTACCTCTGAAATCACCAGGAAAGGGAGCTTCTGCAGGAGCT ATAGCAGGAGGTGTTGTGGCTGGTGTCGTTGTGCTTGCTGCCATCTTCTTGTATATCATA TTCTATAGGAGGAGAAAGGCAAAACAGGCCACCCTGCTTCAATCATCTGAAGATTCCACA CAACTTGGTACGATATCCATGGATAAAGTTACCCCATCAACAATTGTTGGCCCTTCACCA GTTGCAGGCATTACAGTTGACAAATCAGTAGAGTTCTCATATGAAGAACTTTCTAATGCT ACACAGGGGTTTAGTATTGGCAATAAAATAGGGCAAGGTGGTTTTGGTGCTGTCTATTAT GCTGAACTTAGAGGCGAGAAAGCTGCCATCAAGAAAATGGACATGCAGGCTACTCATGAG TTCCTTGCTGAATTAAAGGTTTTGACACATGTTCATCATCTGAACCTGGTGCGTTTGATT GGTTATTGCATCGAGAGCTCTTTGTTCCTTGTCTATGAATTTATCGAGAATGGCAACTTG AGCCAGCATTTGCGTGGAATGGGTTATGAACCTTTGTCTTGGGCTGCCAGGATTCAAATT GCACTAGATTCAGCAAGAGGTCTTGAATACATTCATGAACATACTGTTCCAGTATACATA CATCGGGACATCAAATCAGCAAACATCTTGATAGACAAGAACTACCGGGCAAAGGTTGCA GATTTTGGTTTAACAAAGCTTACAGAAGTTGGTGGTACATCAATGCCCACAGGCACACGT GTTGTTGGTACATTTGGTTACATGCCTCCAGAGTATGCTCGATATGGAGATGTTTCTCCT AAGGTTGACGTCTACGCCTTTGGTGTTGTCCTCTACGAACTTATTTCAGCGAAAGAAGCC ATAGTCAGATCAACCGAATCTTCAAGTGATTCAAAGGGGCTGGTTTATCTGTTTGAGGAG GCCCTCAACTCGCCGGATCCCAAGGAAGGCCTTAGGACGTTGATTGATCCAAAGCTAGGA GAAGATTATCCTATTGATTCCATTCTCAAGCTGACACAACTCGCAAAGGTGTGCACACAA GAAGACCCCAAGCTGAGGCCTTCAATGAGATCCGTGGTCGTCGCGCTGATGACGCTTTCA TCCACAAGTGAGTTCTGGGACATGAACAACCTGTATGAGAACCAAGGTTTGGTCAACCTA ATGTCCGGGAGATAG

Peptide Sequence

PEP ID	Os08t0538300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26909127:26913492:1 gene:Os08g0538300 transcript:Os08t0538300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitin elicitor receptor kinase 1, chitinelicitor receptor kinase-1, LysM receptor-like kinase 9 description:LysM receptor-like kinase, Chitin elicitor signaling (Os08t0538300-01);Similar to LysM receptor-like kinase. (Os08t0538300-02)
Sequence	MEASTSLLVLVLAAAAFAAGTVTEAAGDGCSAGCDLALASFYVTPNQNVTNMADLFGIGA ANYRSLAPYNPNIPNLDFINVGGRVNVYFTCGCRSLPGSPGATYLAGAFPFQMSRGQIYT SVAANYNNLTTAEWLQATNSYPANNIPDTAVINATVNCSCGDASISPDYGLFLTYPLRAE DTLASVAATYGLSSQLDVVRRYNPGMESATGSGIVYIPVKDPNGSYLPLKSPGKGASAGA IAGGVVAGVVVLAAIFLYIIFYRRRKAKQATLLQSSEDSTQLGTISMDKVTPSTIVGPSP VAGITVDKSVEFSYEELSNATQGFSIGNKIGQGGFGAVYYAELRGEKAAIKKMDMQATHE FLAELKVLTHVHHLNLVRLIGYCIESSLFLVYEFIENGNLSQHLRGMGYEPLSWAARIQI ALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNYRAKVADFGLTKLTEVGGTSMPTGTR VVGTFGYMPPEYARYGDVSPKVDVYAFGVVLYELISAKEAIVRSTESSSDSKGLVYLFEE ALNSPDPKEGLRTLIDPKLGEDYPIDSILKLTQLAKVCTQEDPKLRPSMRSVVVALMTLS STSEFWDMNNLYENQGLVNLMSGR

Transcript Sequence

Transcript ID	Os08t0538300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26909127:26913492:1 gene:Os08g0538300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chitin elicitor receptor kinase 1, chitinelicitor receptor kinase-1, LysM receptor-like kinase 9 description:LysM receptor-like kinase, Chitin elicitor signaling (Os08t0538300-01);Similar to LysM receptor-like kinase. (Os08t0538300-02)
Sequence	ACGCTTCAGCCGCGGCTAGGGTTTCGTCGCGAGCGACCTCCCGCCGCCCGCCATGGAAGC TTCCACCTCCCTCCTAGTCCTCGTCCTCGCCGCCGCGGCGTTCGCGGCGGGGACGGTGAC GGAGGCGGCGGGGGACGGGTGCAGCGCCGGGTGCGACCTCGCGCTGGCTTCCTTCTACGT GACGCCGAACCAGAACGTCACCAACATGGCGGATCTCTTCGGCATCGGCGCGGCGAACTA CCGCAGCCTCGCGCCCTACAACCCGAACATCCCCAACCTCGACTTCATCAACGTCGGCGG CCGCGTCAACGTCTACTTCACCTGCGGCTGCCGCTCGCTGCCGGGCTCGCCGGGAGCCAC CTACCTCGCCGGCGCCTTCCCCTTCCAGATGTCCCGCGGCCAGATCTACACCTCCGTCGC CGCCAACTACAACAACCTCACCACCGCCGAGTGGCTGCAGGCCACCAACAGCTACCCGGC CAACAACATCCCGGACACCGCCGTCATCAACGCCACCGTCAACTGCTCCTGCGGCGACGC CAGCATCTCGCCGGACTACGGGCTGTTCCTCACCTACCCGCTCCGCGCCGAGGATACGCT CGCCTCCGTCGCGGCGACCTACGGGCTCTCGTCGCAGCTGGACGTGGTCAGGAGGTACAA CCCGGGGATGGAGAGCGCCACGGGGAGTGGAATCGTGTACATCCCCGTCAAAGATCCCAA TGGAAGTTACCTACCTCTGAAATCACCAGGAAAGGGAGCTTCTGCAGGAGCTATAGCAGG AGGTGTTGTGGCTGGTGTCGTTGTGCTTGCTGCCATCTTCTTGTATATCATATTCTATAG GAGGAGAAAGGCAAAACAGGCCACCCTGCTTCAATCATCTGAAGATTCCACACAACTTGG TACGATATCCATGGATAAAGTTACCCCATCAACAATTGTTGGCCCTTCACCAGTTGCAGG CATTACAGTTGACAAATCAGTAGAGTTCTCATATGAAGAACTTTCTAATGCTACACAGGG GTTTAGTATTGGCAATAAAATAGGGCAAGGTGGTTTTGGTGCTGTCTATTATGCTGAACT TAGAGGCGAGAAAGCTGCCATCAAGAAAATGGACATGCAGGCTACTCATGAGTTCCTTGC TGAATTAAAGGTTTTGACACATGTTCATCATCTGAACCTGGTGCGTTTGATTGGTTATTG CATCGAGAGCTCTTTGTTCCTTGTCTATGAATTTATCGAGAATGGCAACTTGAGCCAGCA TTTGCGTGGAATGGGTTATGAACCTTTGTCTTGGGCTGCCAGGATTCAAATTGCACTAGA TTCAGCAAGAGGTCTTGAATACATTCATGAACATACTGTTCCAGTATACATACATCGGGA CATCAAATCAGCAAACATCTTGATAGACAAGAACTACCGGGCAAAGGTTGCAGATTTTGG TTTAACAAAGCTTACAGAAGTTGGTGGTACATCAATGCCCACAGGCACACGTGTTGTTGG TACATTTGGTTACATGCCTCCAGAGTATGCTCGATATGGAGATGTTTCTCCTAAGGTTGA CGTCTACGCCTTTGGTGTTGTCCTCTACGAACTTATTTCAGCGAAAGAAGCCATAGTCAG ATCAACCGAATCTTCAAGTGATTCAAAGGGGCTGGTTTATCTGTTTGAGGAGGCCCTCAA CTCGCCGGATCCCAAGGAAGGCCTTAGGACGTTGATTGATCCAAAGCTAGGAGAAGATTA TCCTATTGATTCCATTCTCAAGCTGACACAACTCGCAAAGGTGTGCACACAAGAAGACCC CAAGCTGAGGCCTTCAATGAGATCCGTGGTCGTCGCGCTGATGACGCTTTCATCCACAAG TGAGTTCTGGGACATGAACAACCTGTATGAGAACCAAGGTTTGGTCAACCTAATGTCCGG GAGATAGTGACTTTGGTGCCGCCTGCACACTGGGAAAATTGTACATTCAGGCTCATCTGA AGTGTGTAATGACAGCCATTACATTGTTTTGTCATCTTTGTTATTCTTTTCTTTTTTGCT GTTCCTACTTAGAGACCTTAGACATCTGGAAGGCTATATGTAAGATATTGACTTCTACAT TCCAATGGAAATAAATAAATATTATCCTGT