Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0536800-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26841066:26843300:-1 gene:Os08g0536800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 080 description:Similar to TA1 protein (Fragment). (Os08t0536800-01)
Sequence	CCTCTGCCAAGAAGAAGTAGTACTCCTCTTTTCTCTGAAGAAACCAAACTTCCAATCAAC AACACCAAAAAGTTTCAGACACAGAGAGTTCAGCAGCAGCAAAGCAATGGCAGACTTCTC ACCACCAATGACCCCAACATCTCAAGCTTCTTCCTCTACAACCACAGCCATGGCTCCCAA GCTCCACAACCTGCCAATGCAGCAGCAGCAGCCATTGTGGAGGATGCCTCATTGGAGAGC TCAGTGTCTGCAGTTCTTGACACCTCTCCATCTGTGGACAGGAAGAGGAAGGCAGCAGAA GACAGTGCACACTCCAAGGATAGCTGCAAGGATGGCAAGAGCAGGAGAGGGAAGAAGGCC AGCAAAGAAGTGGAGGAGAAGAGCACCACTGAAGATGAGCCTCCAAAAGGGTACATCCAT GTGAGGGCAAGGAGAGGACAGGCAACTGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGG GAGAGGATCAGTGAGAGGATGAGGATGCTGCAAGCACTGGTCCCTGGTTGTGACAAGGTT ACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTACAGTCGTTGCAGAACCAA GTTGAGTTCCTATCCATGAGGATTGCTTCAATGAGCCCAGTGTTGTATGGCTTTGGAATG GACAGCGATGGCCTCCATGACCAAAAGATTGGAGGCATGTTCCAAGAAGCCCTTGCAATG CCTAATCCAGTACTGAACCAATCAAGCCCAGCTCCATCTCAAGCTATCATGGACACAACC TCAACCACATCCTACTCACTGCAAAGCCAGCATGGAGCCATCTCTTTCTCTCAGGACAAT GGCAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGGCAGCAGGAGATGCTCAATCAATTG GTGTTCAACAACATGTGCTCTTTCCAGTAG

Peptide Sequence

PEP ID	Os08t0536800-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26841066:26843300:-1 gene:Os08g0536800 transcript:Os08t0536800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 080 description:Similar to TA1 protein (Fragment). (Os08t0536800-01)
Sequence	PLPRRSSTPLFSEETKLPINNTKKFQTQRVQQQQSNGRLLTTNDPNISSFFLYNHSHGSQ APQPANAAAAAIVEDASLESSVSAVLDTSPSVDRKRKAAEDSAHSKDSCKDGKSRRGKKA SKEVEEKSTTEDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKV TGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLHDQKIGGMFQEALAM PNPVLNQSSPAPSQAIMDTTSTTSYSLQSQHGAISFSQDNGSYLMQAVGEPRQQEMLNQL VFNNMCSFQ

Transcript Sequence

Transcript ID	Os08t0536800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26841066:26843300:-1 gene:Os08g0536800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 080 description:Similar to TA1 protein (Fragment). (Os08t0536800-01)
Sequence	AGCCAAACTTGCTCTACTCTTTAGCCTCTGCCAAGAAGAAGTAGTACTCCTCTTTTCTCT GAAGAAACCAAACTTCCAATCAACAACACCAAAAAGTTTCAGACACAGAGAGTTCAGCAG CAGCAAAGCAATGGCAGACTTCTCACCACCAATGACCCCAACATCTCAAGCTTCTTCCTC TACAACCACAGCCATGGCTCCCAAGCTCCACAACCTGCCAATGCAGCAGCAGCAGCCATT GTGGAGGATGCCTCATTGGAGAGCTCAGTGTCTGCAGTTCTTGACACCTCTCCATCTGTG GACAGGAAGAGGAAGGCAGCAGAAGACAGTGCACACTCCAAGGATAGCTGCAAGGATGGC AAGAGCAGGAGAGGGAAGAAGGCCAGCAAAGAAGTGGAGGAGAAGAGCACCACTGAAGAT GAGCCTCCAAAAGGGTACATCCATGTGAGGGCAAGGAGAGGACAGGCAACTGATAGCCAC AGCCTTGCAGAGAGGGTGAGGAGGGAGAGGATCAGTGAGAGGATGAGGATGCTGCAAGCA CTGGTCCCTGGTTGTGACAAGGTTACTGGAAAGGCTCTCATTTTGGATGAGATCATCAAC TATGTACAGTCGTTGCAGAACCAAGTTGAGTTCCTATCCATGAGGATTGCTTCAATGAGC CCAGTGTTGTATGGCTTTGGAATGGACAGCGATGGCCTCCATGACCAAAAGATTGGAGGC ATGTTCCAAGAAGCCCTTGCAATGCCTAATCCAGTACTGAACCAATCAAGCCCAGCTCCA TCTCAAGCTATCATGGACACAACCTCAACCACATCCTACTCACTGCAAAGCCAGCATGGA GCCATCTCTTTCTCTCAGGACAATGGCAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGG CAGCAGGAGATGCTCAATCAATTGGTGTTCAACAACATGTGCTCTTTCCAGTAGGGGAAG AGTGACAGAGAAAGCAAGAAAAAAGGACCCCACATTGACAATAGGAGGAAATAATAATGC TGCAAGATTGGTAGGAGCATGCAATGCACCAGATAAGTTTGAGATGTTGGATCTAGTCCA TCCCCTTGTCTGGAGGCAGTCTACAACATTGTAAGAGGATTTTGGAGGGAAGAACAGCAA GCGAGTAGAGTTTTCTACACATTTTTCAGAGACTTTGTAATATTTTGTAGCTCCTTATTT GGTTAGGTTCTGCCCATGAAGATTTCCTCAACGGCTGCACTGCCACCACCATTGTACTCT ACTTCATGAAATTATTTTGTTAATATAAAAAGAGAGCTATTGCTACTGTTCCT