Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0536300-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26792942:26797114:-1 gene:Os08g0536300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 26, CCT domain-containing gene 30, CCT (CO, CO-LIKE and TOC1) domain protein 30, CCT domain protein 30 description:Similar to Hd1. (Os08t0536300-01)
Sequence	ATGAAGGATGGTGGTGGAGGAGGAGGGAGGGGGCAGCAGCAGCAGTGGCCTTGCGACTAC TGCGGGGAGGCGGCGGCGGCGCTGCACTGCAGGGCGGACGCCGCGAGGCTGTGCGTCGCC TGCGACCGCCACGTGCACGCCGCCAACGCGCTCTCGCGGAAGCACGTCCGCGCCCCGCTC TGCGCCGCCTGCGCCGCCAGGCCGGCCGCCGCGCGCGTCGCCTCCGCCTCGGCGCCGGCG TTCCTGTGCGCGGACTGCGACACCGGGTGCGGCGGCGACGACGGCGCGGCCTTGCGGGTG CCCGTCGAGGGGTTCTCCGGGTGCCCCGCCGCCGCCGAGCTCGCCGCGTCGTGGGGGCTC GACCTCCCCGGCGGCTGCGGCGGCGAGGAGGAGGAGGCCGACGACGCGTTCTTCTCGGCG CTCGACTACTCCATGCTCGCCGTCGACCCCGTGCTGCGCGACCTCTACGTGCCATGCGAC CCGCCCGAGGTGGTGGTGGCCGGCGGCGGGCGGCGACTCAAGGGGGAGGCGCTCGGCCAC CAGCTCGCCGAGATGGCGCGCCGGGAGGCCGAGACGGCGCACCCGCACACGCAGCCGCAC TCGGATCTGAGCCCCCGCACGCCTCGCCGGACCTCCGCCGCGGCGAGCGGCCGCCTGCAG GAAAAGCAAGCTCCCCCGCCGTTGCCTCATGCTGCTGCGACGGCGGCGCCGCTGCCGTAC ACTTCACTGCTCATGATGGCGCCGGCCAACTGCACCGAGCTCATGGAAAACAACCGTGTT GGAGACGAAGATGAAAATGTTCTGTGGGAGAGCACCGCGCCATCAGTGCCACCAACCCAG ATATGGGATTTTAATTTGGGAAAATCAAGGGATCACAATGAGAACTCTGCACTTGAAGTT GGATTTGGCTCAAACAATGGAGGCTTTATGATTAAGAGTTATAATGACATGCTCAAGGAG ATTTCTTCTGGGACAACGAAGGATCTGGAAGATATTTATGACTCAAGATATTTTGCAGCT GCCGAAGATATCATGTCGACTAATGTCTGTCAGCTGTCATCGAAAAATCCAAGCACCAGG AGCAACAAACGGAAGGCGAGCTCATGCGCTTCGACGATCGATGGACCGACAACTTCCACA AGCCATGTACCTGCTGCTTCAGGGGCATTGGGGGGCTCTTCGAACGACAGAGGATCGGCT CTCCCCAAGGAGATTTCCTTCTGTGATCAGACCGTCGTCCCTACCGGAGCCGATCAGAGG CCATGTACCATCAAGATCGACAGCGAGACGCTCGCGCAGAACAGGGACAGCGCGATGCAG CGGTACAGGGAGAAGAAGAAGAACCGCAGGTATGAGAAGCACATCAGGTACGAGTCGAGG AAGCTGAGAGCGGACACGAGGAAGAGGGTGAAAGGCCGGTTTGTGAAGTCGAACGGAGCA CCTGATGATGTCAGCAATGGCGGGTGA

Peptide Sequence

PEP ID	Os08t0536300-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26792942:26797114:-1 gene:Os08g0536300 transcript:Os08t0536300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 26, CCT domain-containing gene 30, CCT (CO, CO-LIKE and TOC1) domain protein 30, CCT domain protein 30 description:Similar to Hd1. (Os08t0536300-01)
Sequence	MKDGGGGGGRGQQQQWPCDYCGEAAAALHCRADAARLCVACDRHVHAANALSRKHVRAPL CAACAARPAAARVASASAPAFLCADCDTGCGGDDGAALRVPVEGFSGCPAAAELAASWGL DLPGGCGGEEEEADDAFFSALDYSMLAVDPVLRDLYVPCDPPEVVVAGGGRRLKGEALGH QLAEMARREAETAHPHTQPHSDLSPRTPRRTSAAASGRLQEKQAPPPLPHAAATAAPLPY TSLLMMAPANCTELMENNRVGDEDENVLWESTAPSVPPTQIWDFNLGKSRDHNENSALEV GFGSNNGGFMIKSYNDMLKEISSGTTKDLEDIYDSRYFAAAEDIMSTNVCQLSSKNPSTR SNKRKASSCASTIDGPTTSTSHVPAASGALGGSSNDRGSALPKEISFCDQTVVPTGADQR PCTIKIDSETLAQNRDSAMQRYREKKKNRRYEKHIRYESRKLRADTRKRVKGRFVKSNGA PDDVSNGG

Transcript Sequence

Transcript ID	Os08t0536300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26792942:26797114:-1 gene:Os08g0536300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:B-box-containing protein 26, CCT domain-containing gene 30, CCT (CO, CO-LIKE and TOC1) domain protein 30, CCT domain protein 30 description:Similar to Hd1. (Os08t0536300-01)
Sequence	CCTCCTCATTCCTGCATTGCATTGCTTCCGAGCTCAAAAGTCGTCGTAGACCCCCGCCTC CTTCCTCCTCCTCCTCGCGCTTCGATTTGGTTTGGTTTGATTCGGTTTGCGAGATGAAGG ATGGTGGTGGAGGAGGAGGGAGGGGGCAGCAGCAGCAGTGGCCTTGCGACTACTGCGGGG AGGCGGCGGCGGCGCTGCACTGCAGGGCGGACGCCGCGAGGCTGTGCGTCGCCTGCGACC GCCACGTGCACGCCGCCAACGCGCTCTCGCGGAAGCACGTCCGCGCCCCGCTCTGCGCCG CCTGCGCCGCCAGGCCGGCCGCCGCGCGCGTCGCCTCCGCCTCGGCGCCGGCGTTCCTGT GCGCGGACTGCGACACCGGGTGCGGCGGCGACGACGGCGCGGCCTTGCGGGTGCCCGTCG AGGGGTTCTCCGGGTGCCCCGCCGCCGCCGAGCTCGCCGCGTCGTGGGGGCTCGACCTCC CCGGCGGCTGCGGCGGCGAGGAGGAGGAGGCCGACGACGCGTTCTTCTCGGCGCTCGACT ACTCCATGCTCGCCGTCGACCCCGTGCTGCGCGACCTCTACGTGCCATGCGACCCGCCCG AGGTGGTGGTGGCCGGCGGCGGGCGGCGACTCAAGGGGGAGGCGCTCGGCCACCAGCTCG CCGAGATGGCGCGCCGGGAGGCCGAGACGGCGCACCCGCACACGCAGCCGCACTCGGATC TGAGCCCCCGCACGCCTCGCCGGACCTCCGCCGCGGCGAGCGGCCGCCTGCAGGAAAAGC AAGCTCCCCCGCCGTTGCCTCATGCTGCTGCGACGGCGGCGCCGCTGCCGTACACTTCAC TGCTCATGATGGCGCCGGCCAACTGCACCGAGCTCATGGAAAACAACCGTGTTGGAGACG AAGATGAAAATGTTCTGTGGGAGAGCACCGCGCCATCAGTGCCACCAACCCAGATATGGG ATTTTAATTTGGGAAAATCAAGGGATCACAATGAGAACTCTGCACTTGAAGTTGGATTTG GCTCAAACAATGGAGGCTTTATGATTAAGAGTTATAATGACATGCTCAAGGAGATTTCTT CTGGGACAACGAAGGATCTGGAAGATATTTATGACTCAAGATATTTTGCAGCTGCCGAAG ATATCATGTCGACTAATGTCTGTCAGCTGTCATCGAAAAATCCAAGCACCAGGAGCAACA AACGGAAGGCGAGCTCATGCGCTTCGACGATCGATGGACCGACAACTTCCACAAGCCATG TACCTGCTGCTTCAGGGGCATTGGGGGGCTCTTCGAACGACAGAGGATCGGCTCTCCCCA AGGAGATTTCCTTCTGTGATCAGACCGTCGTCCCTACCGGAGCCGATCAGAGGCCATGTA CCATCAAGATCGACAGCGAGACGCTCGCGCAGAACAGGGACAGCGCGATGCAGCGGTACA GGGAGAAGAAGAAGAACCGCAGGTATGAGAAGCACATCAGGTACGAGTCGAGGAAGCTGA GAGCGGACACGAGGAAGAGGGTGAAAGGCCGGTTTGTGAAGTCGAACGGAGCACCTGATG ATGTCAGCAATGGCGGGTGATCTCATCCCTGCAATCCCTGATAGCTAGCTGCAATGTACG TAGCCTGGCTTTTTGACGTTGCAGAGATCGATGTGGCCATATATATGCTGAGAGCTAAGT CTGAAATATGTTGCGTATGTTGTTACAACCTATGCACGCTCTGCTTAAGTCTGTCTGCTG CTGCATGTATTGTTCAGCTAAAATTTTTGCGTCCAAGAGTCGATCTTGATAATTAAGTAC CCCTACTACAAATCTACACTACATACTGTAATAGACCTTAGATTTTTTTTCTCATCTCCT CGTAGAAATATATGGCATTTTATATATACGT