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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0536200-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:26791868:26792452:1 gene:Os08g0536200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os08t0536200-00)
Sequence

ATGGTGGAGCTCGAATCGCAGGAGGCGGTGACGGTCGCCTCCACCGCCGACATCGCCGTC
GACGTCTCGCTCCGGCTTCTCGCCGCCGCCACGTCGCTCGCCGCCGCCGTCGTCGTCGCC
GCCAACCACCAGCAGCGCTGGGGCATCCGCGTCGACTTCACCCTCTTCCAAGTCTGGATT
GGCTTCGTGGCGGTGAACCTGGTGTGCACGGTGTACGCGGCGGCGACGGCGGCGGCGGCG
GCGAGGAAGGCGATGGGGCGGTGGTGGCTGCACCACGCGGACGCGGTGGTGGTGAACCTG
GAGGCGGCGGCGACGGCGGGCGCCGGCGCGATCGGGTCGATCGCCATGTGGGGGAACGAG
GCCAGCGGCTGGTACGCCGTCTGCCGGTTGTACCGGAGGTACTGCAACGCCGGCGCCGCC
GCGCTCGCCCTCTCCCTCGCCGCCGTCCTCCTCCTCGGCGTCGCCTGCGCCCGCTCTCGC
TACCCCAAGATGCCGCCCACCACCTAG

Peptide Sequence

PEP ID

Os08t0536200-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:26791868:26792452:1 gene:Os08g0536200 transcript:Os08t0536200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os08t0536200-00)
Sequence

MVELESQEAVTVASTADIAVDVSLRLLAAATSLAAAVVVAANHQQRWGIRVDFTLFQVWI
GFVAVNLVCTVYAAATAAAAARKAMGRWWLHHADAVVVNLEAAATAGAGAIGSIAMWGNE
ASGWYAVCRLYRRYCNAGAAALALSLAAVLLLGVACARSRYPKMPPTT

Transcript Sequence

Transcript ID

Os08t0536200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:26791868:26792452:1 gene:Os08g0536200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein. (Os08t0536200-00)
Sequence

ATGGTGGAGCTCGAATCGCAGGAGGCGGTGACGGTCGCCTCCACCGCCGACATCGCCGTC
GACGTCTCGCTCCGGCTTCTCGCCGCCGCCACGTCGCTCGCCGCCGCCGTCGTCGTCGCC
GCCAACCACCAGCAGCGCTGGGGCATCCGCGTCGACTTCACCCTCTTCCAAGTCTGGATT
GGCTTCGTGGCGGTGAACCTGGTGTGCACGGTGTACGCGGCGGCGACGGCGGCGGCGGCG
GCGAGGAAGGCGATGGGGCGGTGGTGGCTGCACCACGCGGACGCGGTGGTGGTGAACCTG
GAGGCGGCGGCGACGGCGGGCGCCGGCGCGATCGGGTCGATCGCCATGTGGGGGAACGAG
GCCAGCGGCTGGTACGCCGTCTGCCGGTTGTACCGGAGGTACTGCAACGCCGGCGCCGCC
GCGCTCGCCCTCTCCCTCGCCGCCGTCCTCCTCCTCGGCGTCGCCTGCGCCCGCTCTCGC
TACCCCAAGATGCCGCCCACCACCTAG