Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0536100-03
CDS Infomation	cds chromosome:IRGSP-1.0:8:26785711:26791059:1 gene:Os08g0536100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0536100-01);Hypothetical conserved gene. (Os08t0536100-02);Conserved hypothetical protein. (Os08t0536100-03);Hypothetical conserved gene. (Os08t0536100-04)
Sequence	CATTTCTTTCAGCGTTTCGCTGAACATAGTGTAGATTTGCCTGCAATGGGTTTGCCTCAG GTTAATCCAGCCGAGGAAGCGCCTACGCCGTCAAGTAGGCCTGTGTCGAGCCCTCGTAGC TTCGAGGGTGTTGGCGCCTGTGATTTGGATGGGCTTCTTGGAGGAAGCTCAAGTAGCAGG GTATTCGAATACCCGTCAATCGGTGATTCTGATCGGAAGACTGCATTAGACATCCCGAAT GGATCAACTGAGTATTCTAGAGACAGCCATTGCTTTGATAGACCTGCAGGTCTCCGAGGA CTAAGAATTGATTCGAGGGATGCAGATTCTAGATCTTCTCATAAATTGGATCCTACTGTC CATGTTCCCACAATGAGGGTTGTGGGATTTGAGTCGGGTTCTGTTGGAGGTTCTGCTATA ATAGAAACTGATAATTGTCATACTCCATTCGATCAGCATGAACTTCAGGCAAGGAAAAGA CTGCTCTCACCATTGAAAAACGTTCTTAATAGACAGTTCCACGGTGATATACTGAATATT TCCGCTGGTGATGCTAGATTTGAACTTTCTGATTCAGCCAGGAAACTTAACATTTCGTGC TTCCAAGATAGTAAAAAAGCAAACACTGGTATGCTCGATTCTTTTGAGCCACAAGCCTGG ACAAATTCTAGATGCTCCAATGGTAGTCCAGAATGGGATGCCAATAAGATTAATTCTAAT TTATTCACTGATGGTCCTTTACTTGGGAGCAAGGAGTCCTTAGCTTATCTTGATCATCTA GCTGCTAGTGCAAAATTAGCACATTCTCCACTCTCCTTGTCCCCGCTTAGCCCTAAATTT ATGAACAGAACTAAGGCTACAGGAGCTCAATGCCGTACAATGAGAGATATTGAACATCAT TTTCTAGATTCAAGGGAAAAAGGGGGACCCGATGGAATTAGAATGCTGAGTGTGCTAGAA GAAACTAACATATTACATGATGAATACAATGTCATGACCCCTAAAAGAAGTTCATGCAGA AGATATCAAATCTGGGGTCCTGAATCCACCCCTACTTCTCCCCGGGTTGGTTATGGTCGG AGTTTGAGTCTCCCAGTACGACGGTCACTAGTTGGCTCCTTTGAGGAGTCCCTTCTATCT GGCCGGCTTTCTTATGGAAAAGACAATCAGATAATTGATGGATTCTTAGCTGTTCTAAAT ATTACTGGTGGAAACTTCTCTCCTCCAACTCAGAAGCTGCCGTTCGCAGTAACAAGCATT GACGAGGATAGCTCCTTATTGTACTATTCTTCTATTGATCTTGCTGGGAGGTCGTCAGCA ACTAACTGTAGAAGCCCAAAACTCGAAAGAAGCTTAAGCAATAATGATTCACGATCAGCC AAAAGTCGCTTACGGATCCCTGTTAAGGGCAGGATACAGCTGGTCGTGAGCAACCCTGAG AAGACTCCACTTCATACTTTCTTCTGCAGCTATGACTTGACAGACATGCCTTCAGGGACC AAGACTTTCATGCGGCAAAAGGTCACTCTGTCCCCCACTCTTTCCTCCTCTAATCCAATG AAAGAAGGAAGTAATGCCGGTGACATTAATATTGGCCCCAAGGCTGAGTCTGTCTCATGT GGAGAAGTTACAGAACGGGAAAGTTCAGAATGCTCATCTGATGGATCAGAGGAGAAAGAC GCAAATGCAAAACGTTGTTCGTTGGACAGTAACATGATGGAATCAAATAAACATAACTCT CCTGTGAATAAGAAAAATAACACCGATTCTGATGATTGTTGCTGTCAGATGGACAATTTA GGTGGCAAGAATTATTGCTGTGCATCTTCTAGGATTAATGATAGCTCGGGTGGAGGTGTG ATTCGCTATGCTCTGCACCTGCGCTTTCTATGCCCTTCCTCCAAGAAATCCTCAAAATCG ATGCTACGATGCAAATCCGATCCATCATCGGTGCCATATGATAGTAATGCCGCGAAAGAG GACGATCGCAGATTCTACCTTTATAATGATCTTAGAGTTGTATTTCCTCAAAGGCACTCA GATGCAGATGAAGGCGAGCTGCGTGTGGAACATGACTTCCCTGCTGATCCCAAGTACTTC GACATAAGCAATTGA

Peptide Sequence

PEP ID	Os08t0536100-03
PEP Infomation	pep chromosome:IRGSP-1.0:8:26785711:26791059:1 gene:Os08g0536100 transcript:Os08t0536100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0536100-01);Hypothetical conserved gene. (Os08t0536100-02);Conserved hypothetical protein. (Os08t0536100-03);Hypothetical conserved gene. (Os08t0536100-04)
Sequence	HFFQRFAEHSVDLPAMGLPQVNPAEEAPTPSSRPVSSPRSFEGVGACDLDGLLGGSSSSR VFEYPSIGDSDRKTALDIPNGSTEYSRDSHCFDRPAGLRGLRIDSRDADSRSSHKLDPTV HVPTMRVVGFESGSVGGSAIIETDNCHTPFDQHELQARKRLLSPLKNVLNRQFHGDILNI SAGDARFELSDSARKLNISCFQDSKKANTGMLDSFEPQAWTNSRCSNGSPEWDANKINSN LFTDGPLLGSKESLAYLDHLAASAKLAHSPLSLSPLSPKFMNRTKATGAQCRTMRDIEHH FLDSREKGGPDGIRMLSVLEETNILHDEYNVMTPKRSSCRRYQIWGPESTPTSPRVGYGR SLSLPVRRSLVGSFEESLLSGRLSYGKDNQIIDGFLAVLNITGGNFSPPTQKLPFAVTSI DEDSSLLYYSSIDLAGRSSATNCRSPKLERSLSNNDSRSAKSRLRIPVKGRIQLVVSNPE KTPLHTFFCSYDLTDMPSGTKTFMRQKVTLSPTLSSSNPMKEGSNAGDINIGPKAESVSC GEVTERESSECSSDGSEEKDANAKRCSLDSNMMESNKHNSPVNKKNNTDSDDCCCQMDNL GGKNYCCASSRINDSSGGGVIRYALHLRFLCPSSKKSSKSMLRCKSDPSSVPYDSNAAKE DDRRFYLYNDLRVVFPQRHSDADEGELRVEHDFPADPKYFDISN

Transcript Sequence

Transcript ID	Os08t0536100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26785711:26791059:1 gene:Os08g0536100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os08t0536100-01);Hypothetical conserved gene. (Os08t0536100-02);Conserved hypothetical protein. (Os08t0536100-03);Hypothetical conserved gene. (Os08t0536100-04)
Sequence	GCCAGGAAAGAGAAGAAGAAGCAATTGGGGAGAAGCCAAGCCAAGGTTGGGGAAGGGAAG GGAAGGGAGAGGAGAGGGGCTCGCCGATCGATCCCTCTCCGCCTCCGCCGTCGAACCGCC GCGTCGAGTCGAGTCGAATCGAAGATCGAGCCGCTCCTCCACATCTCCCACTCGCGGTCG CCATCCTCCAGCGTCGCCGCGCGCGGCTGCTCCGCTTCCCGACGCCGCTCGCCGCTCCTC CAGCTCAGCTCCCCCTCGCGCGCGTCTCCTTCTATCTCTCTCTCCAGCGACCAGCGGTGG TGGCCGTCTCTAGCGCCGGCTGTCGTTAGGGGAGAAGCCGGGTACTCGTAGTAGGTTCTG GCGTGACGTTTTGAAGGACTGTGATGTGTGATCCCCACTGGCATGTTGCATCCTAGGTTC CTGGTTGCTTGCTCAGGCTCCAAGTTGTGCTTCATCTCCAGTTGCCGTGGTAGCTATGGG GACATGGCTAGGCGTGGCAGGATGATACCTTTCCGCCTCATGGGCTCGAGCAGGCTGTAC GAGTGTAGCTCCACCCTCCCGGTGTTGATCGGTTTCAGTTGATGATTTCTTTGGAGACTG AAAGAAAGATTCTTAGGGAGTTCATCAGAAAGGATTGGATAAGTGCATTGTAGTTGTAGG AGTGCTAGGAGCCCAAATCGGTGACATTTCTTTCAGCGTTTCGCTGAACATAGTGTAGAT TTGCCTGCAATGGGTTTGCCTCAGGTTAATCCAGCCGAGGAAGCGCCTACGCCGTCAAGT AGGCCTGTGTCGAGCCCTCGTAGCTTCGAGGGTGTTGGCGCCTGTGATTTGGATGGGCTT CTTGGAGGAAGCTCAAGTAGCAGGGTATTCGAATACCCGTCAATCGGTGATTCTGATCGG AAGACTGCATTAGACATCCCGAATGGATCAACTGAGTATTCTAGAGACAGCCATTGCTTT GATAGACCTGCAGGTCTCCGAGGACTAAGAATTGATTCGAGGGATGCAGATTCTAGATCT TCTCATAAATTGGATCCTACTGTCCATGTTCCCACAATGAGGGTTGTGGGATTTGAGTCG GGTTCTGTTGGAGGTTCTGCTATAATAGAAACTGATAATTGTCATACTCCATTCGATCAG CATGAACTTCAGGCAAGGAAAAGACTGCTCTCACCATTGAAAAACGTTCTTAATAGACAG TTCCACGGTGATATACTGAATATTTCCGCTGGTGATGCTAGATTTGAACTTTCTGATTCA GCCAGGAAACTTAACATTTCGTGCTTCCAAGATAGTAAAAAAGCAAACACTGGTATGCTC GATTCTTTTGAGCCACAAGCCTGGACAAATTCTAGATGCTCCAATGGTAGTCCAGAATGG GATGCCAATAAGATTAATTCTAATTTATTCACTGATGGTCCTTTACTTGGGAGCAAGGAG TCCTTAGCTTATCTTGATCATCTAGCTGCTAGTGCAAAATTAGCACATTCTCCACTCTCC TTGTCCCCGCTTAGCCCTAAATTTATGAACAGAACTAAGGCTACAGGAGCTCAATGCCGT ACAATGAGAGATATTGAACATCATTTTCTAGATTCAAGGGAAAAAGGGGGACCCGATGGA ATTAGAATGCTGAGTGTGCTAGAAGAAACTAACATATTACATGATGAATACAATGTCATG ACCCCTAAAAGAAGTTCATGCAGAAGATATCAAATCTGGGGTCCTGAATCCACCCCTACT TCTCCCCGGGTTGGTTATGGTCGGAGTTTGAGTCTCCCAGTACGACGGTCACTAGTTGGC TCCTTTGAGGAGTCCCTTCTATCTGGCCGGCTTTCTTATGGAAAAGACAATCAGATAATT GATGGATTCTTAGCTGTTCTAAATATTACTGGTGGAAACTTCTCTCCTCCAACTCAGAAG CTGCCGTTCGCAGTAACAAGCATTGACGAGGATAGCTCCTTATTGTACTATTCTTCTATT GATCTTGCTGGGAGGTCGTCAGCAACTAACTGTAGAAGCCCAAAACTCGAAAGAAGCTTA AGCAATAATGATTCACGATCAGCCAAAAGTCGCTTACGGATCCCTGTTAAGGGCAGGATA CAGCTGGTCGTGAGCAACCCTGAGAAGACTCCACTTCATACTTTCTTCTGCAGCTATGAC TTGACAGACATGCCTTCAGGGACCAAGACTTTCATGCGGCAAAAGGTCACTCTGTCCCCC ACTCTTTCCTCCTCTAATCCAATGAAAGAAGGAAGTAATGCCGGTGACATTAATATTGGC CCCAAGGCTGAGTCTGTCTCATGTGGAGAAGTTACAGAACGGGAAAGTTCAGAATGCTCA TCTGATGGATCAGAGGAGAAAGACGCAAATGCAAAACGTTGTTCGTTGGACAGTAACATG ATGGAATCAAATAAACATAACTCTCCTGTGAATAAGAAAAATAACACCGATTCTGATGAT TGTTGCTGTCAGATGGACAATTTAGGTGGCAAGAATTATTGCTGTGCATCTTCTAGGATT AATGATAGCTCGGGTGGAGGTGTGATTCGCTATGCTCTGCACCTGCGCTTTCTATGCCCT TCCTCCAAGAAATCCTCAAAATCGATGCTACGATGCAAATCCGATCCATCATCGGTGCCA TATGATAGTAATGCCGCGAAAGAGGACGATCGCAGATTCTACCTTTATAATGATCTTAGA GTTGTATTTCCTCAAAGGCACTCAGATGCAGATGAAGGCGAGCTGCGTGTGGAACATGAC TTCCCTGCTGATCCCAAGTACTTCGACATAAGCAATTGACACCTCTGCTTCTCCTCCTTG TGCATGCAGCTAAGCTCTCATGTCATTTGTGTACATAGCATGCGCTTTCTTGCGCACAAA AAAAAAATGTAAATATCTTTTTAATCCTTCTTAACTTGTCATCACTCATCAGCCCCCGAT GTATTTATCAGTCGCAACCAACTGTACAGTTTCAGTCTTCAAATAAAATGCAACTTTTAG TTC