Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0536000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26777982:26783294:1 gene:Os08g0536000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 beta subunit isoform 1 (EC 1.2.4.1). (Os08t0536000-01)
Sequence	ATGCTGGGCATCGCGAGGAGGCGCCTCGGATCCGGATGCGCGCTGGGGCAACTCATGCAG GCGCTCCGACCGGCCGCCGCCGCCGCCGCGGCGAGGACCTACTCCGCCGCCGCCAAGGAG ATGACTGTGCGTGAAGCATTGAATTCTGCCCTTGATGAGGAGATGTCTGCTGACCCTTCT GTTTTCTTGATGGGAGAAGAGGTTGGAGAATACCAAGGGGCATATAAGATATCGAAGGGT TTGTTAGACAAATATGGCCCTGATAGGGTTCTTGACACACCAATCACAGAGGCTGGTTTT ACTGGAATTGGTGTTGGTGCTGCCTATCAAGGTCTTCGCCCTGTGGTTGAGTTCATGACA TTTAACTTCTCTATGCAGGCAATTGATCACATCATAAATTCAGCTGCCAAGTCGAACTAC ATGTCAGCTGGTCAGATAAACGTTCCTATTGTTTTTAGAGGGCCAAACGGTGCTGCTGCT GGTGTTGGTGCTCAGCACTCTCAGTGTTATGCGGCTTGGTATGCGCATGTACCAGGATTG AAGGTCCTAACTCCTTATTCTGCAGAAGATGCTCGGGGCTTGCTAAAAGCAGCAATCAGG GATCCAGACCCTGTTGTTTTCTTGGAAAATGAACTGCTCTATGGTGAATCATTCCCTGTT TCTGCGGAAGTTCTTGATTCTAGCTTCTGTCTTCCGATTGGGAAGGCTAAGATAGAGCAA GAAGGAAAAGATGTTACAATTACCGCATTCTCCAAGATGGTCGGATATGCTCTTCAGGCT GCAGAGATACTTTCCAAGGAGGGAATCAGTGCTGAGGTGATCAATCTTCGGTCAATTAGG CCATTGGATAGAGCTACTATCAATGCATCAGTTAGGAAAACCAACAGATTGGTAACCCTT GAAGAAGGATTTCCACAACATGGGGTTGGCGCTGAAATATGCATGTCTGTTGTAGAGGAC AGCTTTGAATATCTTGATGCGCCAGTTGAGAGGATTGCTGGAGCTGATGTGCCCATGCCC TACGCTGCCAACCTTGAGAGGATGGCTGTTCCACAGGTTGAGGACATTGTTCGTGCAGCG AAGCGAGCCTGCTACAGAGCAGTACCAATGGCAGCAACAGCCTAA

Peptide Sequence

PEP ID	Os08t0536000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26777982:26783294:1 gene:Os08g0536000 transcript:Os08t0536000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 beta subunit isoform 1 (EC 1.2.4.1). (Os08t0536000-01)
Sequence	MLGIARRRLGSGCALGQLMQALRPAAAAAAARTYSAAAKEMTVREALNSALDEEMSADPS VFLMGEEVGEYQGAYKISKGLLDKYGPDRVLDTPITEAGFTGIGVGAAYQGLRPVVEFMT FNFSMQAIDHIINSAAKSNYMSAGQINVPIVFRGPNGAAAGVGAQHSQCYAAWYAHVPGL KVLTPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEQ EGKDVTITAFSKMVGYALQAAEILSKEGISAEVINLRSIRPLDRATINASVRKTNRLVTL EEGFPQHGVGAEICMSVVEDSFEYLDAPVERIAGADVPMPYAANLERMAVPQVEDIVRAA KRACYRAVPMAATA

Transcript Sequence

Transcript ID	Os08t0536000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26777982:26783294:1 gene:Os08g0536000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pyruvate dehydrogenase E1 beta subunit isoform 1 (EC 1.2.4.1). (Os08t0536000-01)
Sequence	GTACACCCCTATCTCACCCACCACCATCCCAAGGCGGCGCGACGACCCATCTCGCCGCCG CGAATTCTCTCTCCGGCGAACTCCAACTCGAACCCTCCCTCCGCCGACTCCGCTCACGAG ACCTAAACCCTCCTTCCCTCTCCTCTCGTCTCGTTCCCACCACCATGCTGGGCATCGCGA GGAGGCGCCTCGGATCCGGATGCGCGCTGGGGCAACTCATGCAGGCGCTCCGACCGGCCG CCGCCGCCGCCGCGGCGAGGACCTACTCCGCCGCCGCCAAGGAGATGACTGTGCGTGAAG CATTGAATTCTGCCCTTGATGAGGAGATGTCTGCTGACCCTTCTGTTTTCTTGATGGGAG AAGAGGTTGGAGAATACCAAGGGGCATATAAGATATCGAAGGGTTTGTTAGACAAATATG GCCCTGATAGGGTTCTTGACACACCAATCACAGAGGCTGGTTTTACTGGAATTGGTGTTG GTGCTGCCTATCAAGGTCTTCGCCCTGTGGTTGAGTTCATGACATTTAACTTCTCTATGC AGGCAATTGATCACATCATAAATTCAGCTGCCAAGTCGAACTACATGTCAGCTGGTCAGA TAAACGTTCCTATTGTTTTTAGAGGGCCAAACGGTGCTGCTGCTGGTGTTGGTGCTCAGC ACTCTCAGTGTTATGCGGCTTGGTATGCGCATGTACCAGGATTGAAGGTCCTAACTCCTT ATTCTGCAGAAGATGCTCGGGGCTTGCTAAAAGCAGCAATCAGGGATCCAGACCCTGTTG TTTTCTTGGAAAATGAACTGCTCTATGGTGAATCATTCCCTGTTTCTGCGGAAGTTCTTG ATTCTAGCTTCTGTCTTCCGATTGGGAAGGCTAAGATAGAGCAAGAAGGAAAAGATGTTA CAATTACCGCATTCTCCAAGATGGTCGGATATGCTCTTCAGGCTGCAGAGATACTTTCCA AGGAGGGAATCAGTGCTGAGGTGATCAATCTTCGGTCAATTAGGCCATTGGATAGAGCTA CTATCAATGCATCAGTTAGGAAAACCAACAGATTGGTAACCCTTGAAGAAGGATTTCCAC AACATGGGGTTGGCGCTGAAATATGCATGTCTGTTGTAGAGGACAGCTTTGAATATCTTG ATGCGCCAGTTGAGAGGATTGCTGGAGCTGATGTGCCCATGCCCTACGCTGCCAACCTTG AGAGGATGGCTGTTCCACAGGTTGAGGACATTGTTCGTGCAGCGAAGCGAGCCTGCTACA GAGCAGTACCAATGGCAGCAACAGCCTAATTCAGTGACAGTTTTTGTTTCTCCATCTTGT CTTCTTCCCAATGGCCAGGAGTATGTACCACAGCATAATGGTGTCTTCCCAAGTCTCAAC TAGTGTAAGCTGATTTTGTAGATCCACCATGAGGTGTCAATCCCCTTCTTTCTTTAGTCG CAGTCGGATGGCTGCATCCGTTCATAGTCCAAACTGAATATACACATTTGAACCATGCGA CTTCTGGAGATTTTACATGACCGGTTGATGTCAATAACATGTATGTAATGGAGCTCCATA AGTCGGCAAACCAAACCCCCATTAGATTCAATGTTTGTTCGTCCATGCCTCTGAATTGAA TGCACTGGACTCTACAAGTTCATGGTCCTGTTATCC