Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0535700-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:26751395:26754247:1 gene:Os08g0535700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA217 description:Similar to glycerophosphodiester phosphodiesterase. (Os08t0535700-00)
Sequence

ATGGCGCTCCCGGCGGCGACGGCCCGCGCGGCGGCGCTGTGCCGGATCGCGGCGTGCGCG
TCGGCATCGTCGGCGGCGGCGGCGGCGACCGGGGGGAGGCGCGGGGCGGAGAAGCTGCCG
TTCTCGCTGGCGGAGCGGGGGATGGTGGTGGGGGGGCACCGCGGGATGGGGATGAACGCG
GTGGGGGCGCCGCCGGGGGCGCGGATCGAGGCGGTGAGGGAGCGGGAGAACACGCTGCTC
TCGTTCGGCCGTGCCGCCGCGCACGCCGCCGTCGCCTTCGTCGAGTTCGACGTCCAGGTT
ACAAAAGATGGCTGCCCAATAATCTTCCATGATGACTTCATCCTAACACAAGAAACTGAT
GCAGTCTATGCAAAGCGTGTTACTGATCTTCTCTTGGAAGAATTTCTTTCATATGGGCCG
CAAAAGAATTCCCATGAGGTGATTTACTCCTTTTTTTGTTGGCTTCTGCTGTGCCAAGTT
CATGGTTATGAATGCATTTTTGAGATGCCATTTTGTAAACTTGCCCTTATGTTGATTGTT
CAGATCTCCAAGCCATTGCTTAGACGGACCAGCGATGGTAGAGTTGTTAACTGGAGCGCA
AAAGATGATGATTCCCTATGCACATTGCAAGAAGTCTTTGAACGTGTCAGTCCTCGTCTA
GGATTTAACATTGAGCTAAAGTTTGATGATGACATCTTCTATGAAAGGAGTCAACTTGAC
CGTGCGCTTCAAGCTGTATTGCAAGTTGTTTCTCAGTATGCAAGCAATAGGCCTGTATTT
TTCTCAACCTTCCATCCTGATGCGGCAAGGATTATGAGGGAACTTCAGAGCTTATATCCT
GTACTCTTCTTAACAGAAGGAGGAACAGCTCAACACAAAGATTCAAGAAGGAACTCACTT
GATGAAGCTATCCGGGTCTGCCTAGAGTACGAGTTGCATGGACTTGTATCAGAGGTAAGA
GGGGTTTTAAAGAATCCCTCTGCAGTCCTTAGAGCAAAAGAGTCCAACCTTGCACTTCTG
ACCTATGGGCAGCTCAATAATGTGTGGGAGGCTGTGTACATCCAGTATTTGATGGGCGTA
AATGGCGTTATTGTTGATCTAGTGGAGGAGATCTCAAATGCTGTGGCAGATTTCAGTAAA
CCAGTCCTCAATCAGAGCATGCTAGGGAGTGGTGTCGACTTGGTTGGAGCAAAGCATCAG
GCCTTCTCACAGCAGCAGCTGGGTTTCTTGCTCTGGCTTATACCTGAACTGATCCAGCAA
CCACACTGA

Peptide Sequence

PEP ID

Os08t0535700-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:26751395:26754247:1 gene:Os08g0535700 transcript:Os08t0535700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA217 description:Similar to glycerophosphodiester phosphodiesterase. (Os08t0535700-00)
Sequence

MALPAATARAAALCRIAACASASSAAAAATGGRRGAEKLPFSLAERGMVVGGHRGMGMNA
VGAPPGARIEAVRERENTLLSFGRAAAHAAVAFVEFDVQVTKDGCPIIFHDDFILTQETD
AVYAKRVTDLLLEEFLSYGPQKNSHEVIYSFFCWLLLCQVHGYECIFEMPFCKLALMLIV
QISKPLLRRTSDGRVVNWSAKDDDSLCTLQEVFERVSPRLGFNIELKFDDDIFYERSQLD
RALQAVLQVVSQYASNRPVFFSTFHPDAARIMRELQSLYPVLFLTEGGTAQHKDSRRNSL
DEAIRVCLEYELHGLVSEVRGVLKNPSAVLRAKESNLALLTYGQLNNVWEAVYIQYLMGV
NGVIVDLVEEISNAVADFSKPVLNQSMLGSGVDLVGAKHQAFSQQQLGFLLWLIPELIQQ
PH

Transcript Sequence

Transcript ID

Os08t0535700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:26751395:26754247:1 gene:Os08g0535700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA217 description:Similar to glycerophosphodiester phosphodiesterase. (Os08t0535700-00)
Sequence

AATGGCGCTCCCGGCGGCGACGGCCCGCGCGGCGGCGCTGTGCCGGATCGCGGCGTGCGC
GTCGGCATCGTCGGCGGCGGCGGCGGCGACCGGGGGGAGGCGCGGGGCGGAGAAGCTGCC
GTTCTCGCTGGCGGAGCGGGGGATGGTGGTGGGGGGGCACCGCGGGATGGGGATGAACGC
GGTGGGGGCGCCGCCGGGGGCGCGGATCGAGGCGGTGAGGGAGCGGGAGAACACGCTGCT
CTCGTTCGGCCGTGCCGCCGCGCACGCCGCCGTCGCCTTCGTCGAGTTCGACGTCCAGGT
TACAAAAGATGGCTGCCCAATAATCTTCCATGATGACTTCATCCTAACACAAGAAACTGA
TGCAGTCTATGCAAAGCGTGTTACTGATCTTCTCTTGGAAGAATTTCTTTCATATGGGCC
GCAAAAGAATTCCCATGAGGTGATTTACTCCTTTTTTTGTTGGCTTCTGCTGTGCCAAGT
TCATGGTTATGAATGCATTTTTGAGATGCCATTTTGTAAACTTGCCCTTATGTTGATTGT
TCAGATCTCCAAGCCATTGCTTAGACGGACCAGCGATGGTAGAGTTGTTAACTGGAGCGC
AAAAGATGATGATTCCCTATGCACATTGCAAGAAGTCTTTGAACGTGTCAGTCCTCGTCT
AGGATTTAACATTGAGCTAAAGTTTGATGATGACATCTTCTATGAAAGGAGTCAACTTGA
CCGTGCGCTTCAAGCTGTATTGCAAGTTGTTTCTCAGTATGCAAGCAATAGGCCTGTATT
TTTCTCAACCTTCCATCCTGATGCGGCAAGGATTATGAGGGAACTTCAGAGCTTATATCC
TGTACTCTTCTTAACAGAAGGAGGAACAGCTCAACACAAAGATTCAAGAAGGAACTCACT
TGATGAAGCTATCCGGGTCTGCCTAGAGTACGAGTTGCATGGACTTGTATCAGAGGTAAG
AGGGGTTTTAAAGAATCCCTCTGCAGTCCTTAGAGCAAAAGAGTCCAACCTTGCACTTCT
GACCTATGGGCAGCTCAATAATGTGTGGGAGGCTGTGTACATCCAGTATTTGATGGGCGT
AAATGGCGTTATTGTTGATCTAGTGGAGGAGATCTCAAATGCTGTGGCAGATTTCAGTAA
ACCAGTCCTCAATCAGAGCATGCTAGGGAGTGGTGTCGACTTGGTTGGAGCAAAGCATCA
GGCCTTCTCACAGCAGCAGCTGGGTTTCTTGCTCTGGCTTATACCTGAACTGATCCAGCA
ACCACACTGA