Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0535200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26725952:26728794:-1 gene:Os08g0535200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 13 description:Similar to MtN3-like protein. (Os08t0535200-01)
Sequence	ATGGCAGGAGGTTTCTTGTCCATGGCTAACCCGGCGGTCACCCTCTCCGGTGTTGCAGGA AACATCATCTCCTTCCTGGTGTTCCTTGCACCAGTGGCGACGTTCTTGCAGGTGTACAAG AAGAAGTCGACGGGAGGGTACAGCTCGGTGCCGTACGTGGTGGCGCTCTTCAGCTCGGTG CTGTGGATCTTCTACGCGCTGGTGAAGACCAACTCGAGGCCGCTGCTGACCATCAACGCC TTCGGCTGCGGCGTCGAGGCCGCCTACATCGTCCTCTACCTCGTCTACGCGCCGCGCCGC GCCAGGCTCCGCACCCTCGCCTTCTTCCTCCTCCTCGACGTCGCCGCCTTCGCCCTCATC GTCGTCACCACCCTCTACCTCGTCCCCAAGCCCCACCAGGTCAAGTTCCTCGGCAGCGTC TGCCTCGCCTTCTCCATGGCCGTCTTCGTCGCCCCTCTCTCCATCATCTTCAAGGTGATC AAGACCAAGAGCGTCGAGTTCATGCCGATCGGGCTCTCCGTCTGCCTCACGCTCAGCGCC GTCGCGTGGTTCTGCTACGGCCTCTTCACCAAGGACCCCTACGTCATGTACCCGAACGTG GGCGGCTTCTTCTTCAGCTGCGTGCAGATGGGGCTCTACTTCTGGTACCGGAAGCCGAGG AACACGGCCGTGCTGCCGACGACGTCCGACTCCATGTCCCCGATCTCCGCCGCCGCCGCC GCCACGCAGAGGGTGATCGAGCTCCCCGCCGGCACGCACGCCTTCACCATCCTGTCCGTG AGCCCCATCCCGATCCTCGGCGTGCACAAGGTCGAGGTGGTGGCCGCCGAGCAGGCGGCC GACGGCGTCGCCGCCGCCGCCGCCGCCGACAAGGAGCTGCTGCAGAACAAGCCGGAGGTG ATCGAGATCACCGCCGCCGTGTGA

Peptide Sequence

PEP ID	Os08t0535200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26725952:26728794:-1 gene:Os08g0535200 transcript:Os08t0535200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 13 description:Similar to MtN3-like protein. (Os08t0535200-01)
Sequence	MAGGFLSMANPAVTLSGVAGNIISFLVFLAPVATFLQVYKKKSTGGYSSVPYVVALFSSV LWIFYALVKTNSRPLLTINAFGCGVEAAYIVLYLVYAPRRARLRTLAFFLLLDVAAFALI VVTTLYLVPKPHQVKFLGSVCLAFSMAVFVAPLSIIFKVIKTKSVEFMPIGLSVCLTLSA VAWFCYGLFTKDPYVMYPNVGGFFFSCVQMGLYFWYRKPRNTAVLPTTSDSMSPISAAAA ATQRVIELPAGTHAFTILSVSPIPILGVHKVEVVAAEQAADGVAAAAAADKELLQNKPEV IEITAAV

Transcript Sequence

Transcript ID	Os08t0535200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26725952:26728794:-1 gene:Os08g0535200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 13 description:Similar to MtN3-like protein. (Os08t0535200-01)
Sequence	ACACATGCAGTTGTAGTAGCACTTAAGCCTTCCTCTCTAGCTAGCATCTCTTGTGTCAGG AAGTTGGAAGGGATTTCTGGCTAGTTTCTAGCTGGTGTCTCCTCTCCTCTTCCTAACCTT CTCACTGATTAACACCTTAGAGTTAGTTAATAACCTTCATCACCAGTAGCAATGGCAGGA GGTTTCTTGTCCATGGCTAACCCGGCGGTCACCCTCTCCGGTGTTGCAGGAAACATCATC TCCTTCCTGGTGTTCCTTGCACCAGTGGCGACGTTCTTGCAGGTGTACAAGAAGAAGTCG ACGGGAGGGTACAGCTCGGTGCCGTACGTGGTGGCGCTCTTCAGCTCGGTGCTGTGGATC TTCTACGCGCTGGTGAAGACCAACTCGAGGCCGCTGCTGACCATCAACGCCTTCGGCTGC GGCGTCGAGGCCGCCTACATCGTCCTCTACCTCGTCTACGCGCCGCGCCGCGCCAGGCTC CGCACCCTCGCCTTCTTCCTCCTCCTCGACGTCGCCGCCTTCGCCCTCATCGTCGTCACC ACCCTCTACCTCGTCCCCAAGCCCCACCAGGTCAAGTTCCTCGGCAGCGTCTGCCTCGCC TTCTCCATGGCCGTCTTCGTCGCCCCTCTCTCCATCATCTTCAAGGTGATCAAGACCAAG AGCGTCGAGTTCATGCCGATCGGGCTCTCCGTCTGCCTCACGCTCAGCGCCGTCGCGTGG TTCTGCTACGGCCTCTTCACCAAGGACCCCTACGTCATGTACCCGAACGTGGGCGGCTTC TTCTTCAGCTGCGTGCAGATGGGGCTCTACTTCTGGTACCGGAAGCCGAGGAACACGGCC GTGCTGCCGACGACGTCCGACTCCATGTCCCCGATCTCCGCCGCCGCCGCCGCCACGCAG AGGGTGATCGAGCTCCCCGCCGGCACGCACGCCTTCACCATCCTGTCCGTGAGCCCCATC CCGATCCTCGGCGTGCACAAGGTCGAGGTGGTGGCCGCCGAGCAGGCGGCCGACGGCGTC GCCGCCGCCGCCGCCGCCGACAAGGAGCTGCTGCAGAACAAGCCGGAGGTGATCGAGATC ACCGCCGCCGTGTGACGACGACTGATCTCGACGACGACAGATTCTCGCTACTGATGAAGA AGACGACGACGATGGCCGGATCGATGACGGACAGAATTTAGCAGTGTGGATTACTACCGA ACTTTAATTAGTTGGTTAATTATTGGATTACAATGTGGTAAGAGTGTGTCATTAGCAGCT AGTTAACTTACTTAAATTAATTATCTTGTTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCA GCTTTGAGTGAGTGAGTGAGTGATCTCGACGTAGTTTGCTGGTTGGTGTAATAAGAAAAA GGCGATCTACTAGTAGTCTACTAGCTAGTACGCATGCATGTGTGTGTGCTCTACTTACCG TGTTGCAATCTCATCTCTTTGTACTTACAACTCAGAAATCAATGGAAGATTGTGACAGGT ATTATTAGTAGTTACT