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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0535000-00
CDS Infomation

cds chromosome:IRGSP-1.0:8:26696844:26699288:1 gene:Os08g0535000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cation cation antiporter. (Os08t0535000-00)
Sequence

ATGGTGCTTAGCAAGGTTGAAGTGAACTTGATAAGGCTGCTTGAGGCAGCTCCTCGACAG
CAGAACCAGACTAAGCTTGTCCATTATGTAACCACAGCCAGGGAACTGTTGGAGCAGCTA
GGATCAGAAACTACTCTAGAAGGGATATCAAGTGTATCAAAAGCTAAGACAAGTGAGTAT
TCAGAAAAGATTGAAGCATTGGCTGCCCGGCTTGCTGCTCCAGAGCCAGAAAATGAAATG
CCAGTTGATGAGAATAGAGAGGTAGAAAGCTCTTATGAAGGAGATAAGCCAGGAAGTCCA
ATATCATTATCATCAGGATTACGTAGGAGACCAATGTAA

Peptide Sequence

PEP ID

Os08t0535000-00
PEP Infomation

pep chromosome:IRGSP-1.0:8:26696844:26699288:1 gene:Os08g0535000 transcript:Os08t0535000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cation cation antiporter. (Os08t0535000-00)
Sequence

MVLSKVEVNLIRLLEAAPRQQNQTKLVHYVTTARELLEQLGSETTLEGISSVSKAKTSEY
SEKIEALAARLAAPEPENEMPVDENREVESSYEGDKPGSPISLSSGLRRRPM

Transcript Sequence

Transcript ID

Os08t0535000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:26696844:26699288:1 gene:Os08g0535000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cation cation antiporter. (Os08t0535000-00)
Sequence

GTTCCACCACCGCGTCCGACCGCCGACGCGACCGGCGGCGACCCTCCCTCTTCAGCCGTT
CGCCGGACTTGCGGCCAGACAGATCCCCTTCGCCGCCGGGAGCAAGATCAGGCGGTGTCC
GCGGCGGGGCTCGTCGGGATCTGCCCCCATCCATGGTCGCGCGGCGCCGCTTCTGACTGC
TCCGCCCCCGCGTTGATGCGCTGCCCGCGGCATCGAGCCGCAAGGTTTTTGTCATATTAA
TCATGGTGCTTAGCAAGGTTGAAGTGAACTTGATAAGGCTGCTTGAGGCAGCTCCTCGAC
AGCAGAACCAGACTAAGCTTGTCCATTATGTAACCACAGCCAGGGAACTGTTGGAGCAGC
TAGGATCAGAAACTACTCTAGAAGGGATATCAAGTGTATCAAAAGCTAAGACAAGTGAGT
ATTCAGAAAAGATTGAAGCATTGGCTGCCCGGCTTGCTGCTCCAGAGCCAGAAAATGAAA
TGCCAGTTGATGAGAATAGAGAGGTAGAAAGCTCTTATGAAGGAGATAAGCCAGGAAGTC
CAATATCATTATCATCAGGATTACGTAGGAGACCAATGTAAGTTTTAAAATTTGTATGTT
TCTTTTTCATAATTATTACAATTAGCGAGCTAATAATGGATGTAAATTGTATGTTCTTTT
ACATATGTTTGATGAATTGTAACTGAACACATTTATCTTTTCTATGGACCCTTTGTATAT
TACTAAATCCGGTTTGAATGAATTTGTATGTACTGAACTTAGATGGACT