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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0534400-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:26662244:26664175:1 gene:Os08g0534400 gene_biotype:protein_coding transcript_biotype:protein_coding description:EKC/KEOPS complex, subunit Pcc1 domain containing protein. (Os08t0534400-01)
Sequence

GAAAAGAACTCGAATCCTGTGGTATTTATCTTGCAGTTGCAACCTGACAAGGTAAAGAGG
GAGATGTCTGTTTCTGGTGGCAAGCTCGTCGTGCACTTTGAAGCTGTAGAGGCTCGGTTC
CTGCGAGCATCGTTCAGCGCGTTCGTCGATCTTACAGTACTGGTTACCAAGCTTGTTGAA
GAATATGGCATCAGCAAGGAAGGAGAAGGCAGTATCTAG

Peptide Sequence

PEP ID

Os08t0534400-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:26662244:26664175:1 gene:Os08g0534400 transcript:Os08t0534400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EKC/KEOPS complex, subunit Pcc1 domain containing protein. (Os08t0534400-01)
Sequence

EKNSNPVVFILQLQPDKVKREMSVSGGKLVVHFEAVEARFLRASFSAFVDLTVLVTKLVE
EYGISKEGEGSI

Transcript Sequence

Transcript ID

Os08t0534400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:26662244:26664175:1 gene:Os08g0534400 gene_biotype:protein_coding transcript_biotype:protein_coding description:EKC/KEOPS complex, subunit Pcc1 domain containing protein. (Os08t0534400-01)
Sequence

GAGCTGAGAAGCTGAGCACCCAAAAAGCAGCGCGCGCGCGCCGGCCCTAGCCACGACGCA
CCGCGCGCGCCGGCCGCCGGCGAGGCCCACGACCGCCGCCGCACGCCTTTGGCCAGATCG
CGCAGGCGAGATCCTCCTATGGCCGCCTCCGTAGCGCCAGCGTCGTCGTCCGGCTGGGAC
TTCACCTGTGACTTTGAAATTGATTATGGATCCGAGGAACGCGCATCCATAGTTTACAAA
ACGCTAGCTGTTGATAAGGAGCTTGTTGAGAAAAGAACTCGAATCCTGTGGTATTTATCT
TGCAGTTGCAACCTGACAAGGTAAAGAGGGAGATGTCTGTTTCTGGTGGCAAGCTCGTCG
TGCACTTTGAAGCTGTAGAGGCTCGGTTCCTGCGAGCATCGTTCAGCGCGTTCGTCGATC
TTACAGTACTGGTTACCAAGCTTGTTGAAGAATATGGCATCAGCAAGGAAGGAGAAGGCA
GTATCTAGCTAGTTTTACTCCCCTGTATCTTAGAAAAATGTTTTACAACACCTTTGAGCA
TTCATACCTTCTTTTATATCATATTATGTGTGTTCTTCGTTTCTTAGGCCAGAAATCTAC
AAGATAGAAGCAGCTGTTGTAATTCCAGATTTCTTGAATCTTGGTATGGGATTTGCCTCT
CAAGAGTAACTCTGAACATACTTGGTTGGGATAGTAGTCAGTTCTTGTCGCCTTAAATG