Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0532900-02
CDS Infomation

cds chromosome:IRGSP-1.0:8:26558909:26561586:-1 gene:Os08g0532900 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os08t0532900-01);emp24/gp25L/p24 family protein. (Os08t0532900-02)
Sequence

ATGGAGGTCCTGAGTTGGAGAACGGTGTGCCTCTTGGTTCTCTGCACCGTGGCGTTGCTG
CGCCCGGCTGCGGCTATCCGCTTTGTGATTGACAGGGAAGAGTGTTTCTCGCATAACGTG
GAGTATGAGGGGGATACTGTTCATGTATCGTTCGTGGTGATCAAGGCTGACACCCCATGG
CATTATAGCGAGGACGGAGTGGATCTTGTGGTTAAGGATCCTAATGGTGCTCAAGTCCGT
GATTCTCGTGACAAGACTAGTGATAAGTTTGAGTTCATAGTTCAGAAGAGAGGCGTACAT
CGCTTCTGCTTCACCAATAAATCCCCATACCATGAAACTGTAGATTTTGATGTGCATGTT
GGCCATTTTTCGTACTTTGATCAGCATGCGAAAGATGAACATTTTGCTCCTTTGTTTGAA
CAAATAGCAAAATTAGATGAAGCGCTTTACAACATTCAGTTCGAGCAGCACTGGCTAGAG
GCCCAAACTGACCGACAAGCTATATTGAACGAAAACATGAGCAGGAGGGCTGTCCACAAG
GCTCTATTGGAGTCAGCAGCGCTGATTGCAGCTAGCGTCATTCAAGTCTATCTATTGCGC
CGCCTCTTTGAGCGCAAGTTGGGGACATCCAGGGTCTAA

Peptide Sequence

PEP ID

Os08t0532900-02
PEP Infomation

pep chromosome:IRGSP-1.0:8:26558909:26561586:-1 gene:Os08g0532900 transcript:Os08t0532900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os08t0532900-01);emp24/gp25L/p24 family protein. (Os08t0532900-02)
Sequence

MEVLSWRTVCLLVLCTVALLRPAAAIRFVIDREECFSHNVEYEGDTVHVSFVVIKADTPW
HYSEDGVDLVVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYHETVDFDVHV
GHFSYFDQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHK
ALLESAALIAASVIQVYLLRRLFERKLGTSRV

Transcript Sequence

Transcript ID

Os08t0532900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:26558909:26561586:-1 gene:Os08g0532900 gene_biotype:protein_coding transcript_biotype:protein_coding description:emp24/gp25L/p24 family protein. (Os08t0532900-01);emp24/gp25L/p24 family protein. (Os08t0532900-02)
Sequence

ATTTGTTGTTACCTCTGGCATCCATAAGATGGAGGTCCTGAGTTGGAGAACGGTGTGCCT
CTTGGTTCTCTGCACCGTGGCGTTGCTGCGCCCGGCTGCGGCTATCCGCTTTGTGATTGA
CAGGGAAGAGTGTTTCTCGCATAACGTGGAGTATGAGGGGGATACTGTTCATGTATCGTT
CGTGGTGATCAAGGCTGACACCCCATGGCATTATAGCGAGGACGGAGTGGATCTTGTGGT
TAAGGATCCTAATGGTGCTCAAGTCCGTGATTCTCGTGACAAGACTAGTGATAAGTTTGA
GTTCATAGTTCAGAAGAGAGGCGTACATCGCTTCTGCTTCACCAATAAATCCCCATACCA
TGAAACTGTAGATTTTGATGTGCATGTTGGCCATTTTTCGTACTTTGATCAGCATGCGAA
AGATGAACATTTTGCTCCTTTGTTTGAACAAATAGCAAAATTAGATGAAGCGCTTTACAA
CATTCAGTTCGAGCAGCACTGGCTAGAGGCCCAAACTGACCGACAAGCTATATTGAACGA
AAACATGAGCAGGAGGGCTGTCCACAAGGCTCTATTGGAGTCAGCAGCGCTGATTGCAGC
TAGCGTCATTCAAGTCTATCTATTGCGCCGCCTCTTTGAGCGCAAGTTGGGGACATCCAG
GGTCTAAATACTCCAAAAGTAGCAGCTCCTCCTAATTTACACTCTCGTCATCCCAACTAA
AGCTGTAATTCCGAACTGTATTGGTTGCTAGATCTGCTGTTTACATGCTGTGGGTTGCTG
TCACATAGACCTTTAATTATTATGATTCCATTAGATGTTTTCCTTGAAACTATACTATCA
GGACCACATACTCGCATCAGCTTCACTATGCAGCTTCCATCTACAGCTGCAACGGTCCCA
TGAATGTTCTCTTCGATTGG