Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0531200-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26452131:26462511:-1 gene:Os08g0531200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-163 description:WD40 repeat domain containing protein. (Os08t0531200-01)
Sequence	ATGCCGGAGCCGCAGGCCATCCTCCCGCTCCGCGCGCTCCCGCCGGACGCGCCGCTCCCG CCCCCGCTCCCGGCGCCGTTCCACTCCCCGTCCACCCCCGCCGCCGCCACCGCCACCGCC ACCGCCACGCCCGCCACCGCCACAGCCACGCCGGCCACGCCCCCCAACCCGCCCGCTCCC CCCGCCGCGCCGCCGCCCACCTTCTCCTCCTCGCGGCCCCCGCACCCATGGGAGATCGCC GCGCGCGCCTGGCTCGAGTCCTTCCCCGACGGCCGCCCGCCCACCGAGGCCGAGGTCGAC GCCTACATCGACGTCCACCGCCCCGAGCTCCCCTCCCTCCCCCGCTCCCAGCTCCACCAG CGCCTCCTCGCCCTCCGCGGCGACCAGGTTTTAGATGCAGACCAAAGTGCTTTCCCGTAT AGGTTCCAGCGGACTGATCTTTGGAAGCCTGTGTACAAGTGGTTGGAATCTCTTGAGCTA GAGTCGCTAGTTACATCAAAGGAGATATCGGAGTGGCTTACATCAAACCCACAGATAATG GACAGGTTGGTTGAGAAGCATTCAAAATATCATTTGATACACTACACCCAGAGGATGCAC TTGAAGCTTCTGAAGAAGAGGGGGAAGATACCGAAGAGTCTACAACTTTCTGCGGCTAGA GCCACGGTCCCAGCGAGTGCTTCTCCAGTTACCCCACAAGAAAGCACACCAACTGTGAGG AAATCTCTACCTCCAGTGACAGGTGTTAGTGCAAGCAGATTTGTGGGCGGCGATGCTCCT ATAAGGGACAAGAAGATGTCACTATCCAAAAAAAAGGAAGCTTTCCTTAAATATGAACTT TTGACAGACTTGCAGAATCAGTTGACCAGTGTGTTGTTAAAGAATCGCCGCACTGTTGCT ATTAAAGAAACAGATTTTCAGAAGCCAGAGACTAATGTAAGTATGCAAGAAGGGGCTGCT ACTGCAAGCACATCAACCCCTACAGAGGTGACGAAGATTTATTGCAACGAACAGCCAAAC CAAGGAGCAGCAGACAATGAATTTGGCCAGAAGAGAAAAAGGAACCCTATAATTGTAACA CCTGCTTGGTGTTATAGTGAAGCTACAACAGGAACTTTGCAGCATGAGCAAAATTCTAGT TCACATAGCAATGGTGCAAGAAGTTATGATATTTGGAAGGGACATGTTAATCCATCGTTT CCACAAAGATCCATTAAGAAAAACATACTGTTCTGTCTAGAAGGGCGTGAAGCTGGTGCC AACTGGTCTCAAACTTGTTCAAATGGAGGTCACGCTGGAAGGAATTGTGAAAGATGGAGC CCCTTTCTTGAAGGATGGAATTCACCTGCGGTCCAGTTTGAAGGTCCTGCTGTACATGTC GTGAAACAAAGTTACCTATCTTGGTGTCCGACTTCATGTGCTTATACGTCAAGCGCTCCT TCTGCTCAGCCTCATGACAGGCAAGGTGTACGCAAAGTTCTTGATGTAAAGTTTCATCCA GAAGGGTTGCCTCAGCTTGTCTCTTGCTCTAATGAGGCACCGAATGAATTGTTGCTTTTC AATCTTCTTTCTGGAAGAGCTACTCAACTTAGAGGCCACAATACCAAGATCCAGGCTACC GCATTTGCGGTGAAAGGAGCAAGCATAGTATCTTGTGGTTCTAATCTATTAAAGGTATGG GATTGCATTACAGGGTCTTGCCTCTATACCTTAGGTGGTGACGATCACAATTCAGTGGGA CATACTCAAAAAATTAATGCTATGGCTGTTAATAAATGGCAATCCTGTCTTGTTGTCACT AGTGGAGCAAAAGGTGATGGTAAGCTTCTACTGTGGAATGCTTTGAGAGGAGAACTCGCT TCTGATCTAAATTCAAACTTGAGGTCCCAGGATATGGTCTATCCTTCAATTGATACAATG GAGTTCTGTAGTGAAAATCTTCTAGCATGTGGAAGTGATTGTGAATATGGAGGTTCAGCT GTGGTACAATTGTGGGATATTGAGTCTCCAGAATCGTACCTATCTTTCTCTGCCAGTGAT TCTTATATTACTTCCCTTAAAACCAACCCTGCTGGCAACACCATTATCACAGGTTCTGGT GATGGGACTATTGGTCTTTTTGATATCCGTGCTTGTTCTGCAATTAATCATTTGTCAGTG GGACCTGGTTGTGAGGTCACATCTGTTTCATTTAGCAACTGTGGTACCTATTTTTCGGCT TCTAGCACATCAAACAACACACTGGTTTGGGACACAAGAATAGTTCCATTAAACCAAAGC AGGGATGTTTCACGAAGTAAAGACATGCGTTTTTTCCGGCCTTTGCATTGCCTGAGCCAC GGCAAGCAGATGCCTACTGCAGAATATACAAGTCAACTGCCCGGCCATGTTGATGAGGGT GATCAGGGGGTGAATGCGATGCAGTGGTTGCATAAAGAACCTGTACTTGTTACTGTAAGC GGTGATGGCAGTGTTGGAATGTGGGATGTTACTTTAGGTCAACCTTGTGTCAGACATATC TTAACGCATAATCGATGTGCTAATGCGGTTGCTGTTGCTCCTAATGACGAATACATTTCC ACAGGGGGAAGTGACCAAAAAGTTGTTTTATATCATAGTAAAAGTGGGTGTGCCCACCTT AATTGGCGTCTCACATATCCTCTCCCAGGAAATGATTAA

Peptide Sequence

PEP ID	Os08t0531200-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26452131:26462511:-1 gene:Os08g0531200 transcript:Os08t0531200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-163 description:WD40 repeat domain containing protein. (Os08t0531200-01)
Sequence	MPEPQAILPLRALPPDAPLPPPLPAPFHSPSTPAAATATATATPATATATPATPPNPPAP PAAPPPTFSSSRPPHPWEIAARAWLESFPDGRPPTEAEVDAYIDVHRPELPSLPRSQLHQ RLLALRGDQVLDADQSAFPYRFQRTDLWKPVYKWLESLELESLVTSKEISEWLTSNPQIM DRLVEKHSKYHLIHYTQRMHLKLLKKRGKIPKSLQLSAARATVPASASPVTPQESTPTVR KSLPPVTGVSASRFVGGDAPIRDKKMSLSKKKEAFLKYELLTDLQNQLTSVLLKNRRTVA IKETDFQKPETNVSMQEGAATASTSTPTEVTKIYCNEQPNQGAADNEFGQKRKRNPIIVT PAWCYSEATTGTLQHEQNSSSHSNGARSYDIWKGHVNPSFPQRSIKKNILFCLEGREAGA NWSQTCSNGGHAGRNCERWSPFLEGWNSPAVQFEGPAVHVVKQSYLSWCPTSCAYTSSAP SAQPHDRQGVRKVLDVKFHPEGLPQLVSCSNEAPNELLLFNLLSGRATQLRGHNTKIQAT AFAVKGASIVSCGSNLLKVWDCITGSCLYTLGGDDHNSVGHTQKINAMAVNKWQSCLVVT SGAKGDGKLLLWNALRGELASDLNSNLRSQDMVYPSIDTMEFCSENLLACGSDCEYGGSA VVQLWDIESPESYLSFSASDSYITSLKTNPAGNTIITGSGDGTIGLFDIRACSAINHLSV GPGCEVTSVSFSNCGTYFSASSTSNNTLVWDTRIVPLNQSRDVSRSKDMRFFRPLHCLSH GKQMPTAEYTSQLPGHVDEGDQGVNAMQWLHKEPVLVTVSGDGSVGMWDVTLGQPCVRHI LTHNRCANAVAVAPNDEYISTGGSDQKVVLYHSKSGCAHLNWRLTYPLPGND

Transcript Sequence

Transcript ID	Os08t0531200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26452131:26462511:-1 gene:Os08g0531200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-163 description:WD40 repeat domain containing protein. (Os08t0531200-01)
Sequence	CTCCGACTCTCCGGCCACCGCCCGCCGCCGGCCGCCCTAGCCGGCGCAAATGCCGGAGCC GCAGGCCATCCTCCCGCTCCGCGCGCTCCCGCCGGACGCGCCGCTCCCGCCCCCGCTCCC GGCGCCGTTCCACTCCCCGTCCACCCCCGCCGCCGCCACCGCCACCGCCACCGCCACGCC CGCCACCGCCACAGCCACGCCGGCCACGCCCCCCAACCCGCCCGCTCCCCCCGCCGCGCC GCCGCCCACCTTCTCCTCCTCGCGGCCCCCGCACCCATGGGAGATCGCCGCGCGCGCCTG GCTCGAGTCCTTCCCCGACGGCCGCCCGCCCACCGAGGCCGAGGTCGACGCCTACATCGA CGTCCACCGCCCCGAGCTCCCCTCCCTCCCCCGCTCCCAGCTCCACCAGCGCCTCCTCGC CCTCCGCGGCGACCAGGTTTTAGATGCAGACCAAAGTGCTTTCCCGTATAGGTTCCAGCG GACTGATCTTTGGAAGCCTGTGTACAAGTGGTTGGAATCTCTTGAGCTAGAGTCGCTAGT TACATCAAAGGAGATATCGGAGTGGCTTACATCAAACCCACAGATAATGGACAGGTTGGT TGAGAAGCATTCAAAATATCATTTGATACACTACACCCAGAGGATGCACTTGAAGCTTCT GAAGAAGAGGGGGAAGATACCGAAGAGTCTACAACTTTCTGCGGCTAGAGCCACGGTCCC AGCGAGTGCTTCTCCAGTTACCCCACAAGAAAGCACACCAACTGTGAGGAAATCTCTACC TCCAGTGACAGGTGTTAGTGCAAGCAGATTTGTGGGCGGCGATGCTCCTATAAGGGACAA GAAGATGTCACTATCCAAAAAAAAGGAAGCTTTCCTTAAATATGAACTTTTGACAGACTT GCAGAATCAGTTGACCAGTGTGTTGTTAAAGAATCGCCGCACTGTTGCTATTAAAGAAAC AGATTTTCAGAAGCCAGAGACTAATGTAAGTATGCAAGAAGGGGCTGCTACTGCAAGCAC ATCAACCCCTACAGAGGTGACGAAGATTTATTGCAACGAACAGCCAAACCAAGGAGCAGC AGACAATGAATTTGGCCAGAAGAGAAAAAGGAACCCTATAATTGTAACACCTGCTTGGTG TTATAGTGAAGCTACAACAGGAACTTTGCAGCATGAGCAAAATTCTAGTTCACATAGCAA TGGTGCAAGAAGTTATGATATTTGGAAGGGACATGTTAATCCATCGTTTCCACAAAGATC CATTAAGAAAAACATACTGTTCTGTCTAGAAGGGCGTGAAGCTGGTGCCAACTGGTCTCA AACTTGTTCAAATGGAGGTCACGCTGGAAGGAATTGTGAAAGATGGAGCCCCTTTCTTGA AGGATGGAATTCACCTGCGGTCCAGTTTGAAGGTCCTGCTGTACATGTCGTGAAACAAAG TTACCTATCTTGGTGTCCGACTTCATGTGCTTATACGTCAAGCGCTCCTTCTGCTCAGCC TCATGACAGGCAAGGTGTACGCAAAGTTCTTGATGTAAAGTTTCATCCAGAAGGGTTGCC TCAGCTTGTCTCTTGCTCTAATGAGGCACCGAATGAATTGTTGCTTTTCAATCTTCTTTC TGGAAGAGCTACTCAACTTAGAGGCCACAATACCAAGATCCAGGCTACCGCATTTGCGGT GAAAGGAGCAAGCATAGTATCTTGTGGTTCTAATCTATTAAAGGTATGGGATTGCATTAC AGGGTCTTGCCTCTATACCTTAGGTGGTGACGATCACAATTCAGTGGGACATACTCAAAA AATTAATGCTATGGCTGTTAATAAATGGCAATCCTGTCTTGTTGTCACTAGTGGAGCAAA AGGTGATGGTAAGCTTCTACTGTGGAATGCTTTGAGAGGAGAACTCGCTTCTGATCTAAA TTCAAACTTGAGGTCCCAGGATATGGTCTATCCTTCAATTGATACAATGGAGTTCTGTAG TGAAAATCTTCTAGCATGTGGAAGTGATTGTGAATATGGAGGTTCAGCTGTGGTACAATT GTGGGATATTGAGTCTCCAGAATCGTACCTATCTTTCTCTGCCAGTGATTCTTATATTAC TTCCCTTAAAACCAACCCTGCTGGCAACACCATTATCACAGGTTCTGGTGATGGGACTAT TGGTCTTTTTGATATCCGTGCTTGTTCTGCAATTAATCATTTGTCAGTGGGACCTGGTTG TGAGGTCACATCTGTTTCATTTAGCAACTGTGGTACCTATTTTTCGGCTTCTAGCACATC AAACAACACACTGGTTTGGGACACAAGAATAGTTCCATTAAACCAAAGCAGGGATGTTTC ACGAAGTAAAGACATGCGTTTTTTCCGGCCTTTGCATTGCCTGAGCCACGGCAAGCAGAT GCCTACTGCAGAATATACAAGTCAACTGCCCGGCCATGTTGATGAGGGTGATCAGGGGGT GAATGCGATGCAGTGGTTGCATAAAGAACCTGTACTTGTTACTGTAAGCGGTGATGGCAG TGTTGGAATGTGGGATGTTACTTTAGGTCAACCTTGTGTCAGACATATCTTAACGCATAA TCGATGTGCTAATGCGGTTGCTGTTGCTCCTAATGACGAATACATTTCCACAGGGGGAAG TGACCAAAAAGTTGTTTTATATCATAGTAAAAGTGGGTGTGCCCACCTTAATTGGCGTCT CACATATCCTCTCCCAGGAAATGATTAATGTACTGCCATAATTTGTAGAATGAAATCTGA GGAATTATCTGCACTAGGTTGTTGAACCATAGTAGGAAGTCTGCTGCTCCAAATAGTACT TGAGCCAGGGCTGGTATTGAAGCCTCTGCTTGATGGACGACTGCAGCTTGTGTTGGGTCT TAATATAAATGAATTCTCATGCCTCCTTGCAAGTTGAGTCTGTACCTTTTTATTCTCCTG TAAAGAGAATCTTGATGAATTAAACAACAATTTGACTGATAATTTTCTGTATCACCAATC GATTAATAACTACTTACCCATTGCCTGTATTTTTCCTCTTCCTTTTCCTTCAGTGTTAGC ATGTAGTCTTTCAGCATGGCCAATAGGGGAAGCTGCAAAACTGAATGTTAAAAAGTCTTG TTCAAGAAATTAAGGGACTTCTATCATTTGAAACC