Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0531100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26448418:26452961:1 gene:Os08g0531100 gene_biotype:protein_coding transcript_biotype:protein_coding description:MAP65/ASE1 family protein. (Os08t0531100-01)
Sequence	ATGGGATCACTCAAGATGACTGGAAAAGCTCCCTGTGCAGCACTGCCAGAGTCCTCATGT GCCTACCTGCTTCAAGAACTGAAGATGATATGGGATGAAGTTGGGCAAGAAGAAAATGAA AGAGAGAGAATACTTCAAGAGATAGAGCAGGAATGCCAGGAAGTTTATAGGAGAAAAGTA AATAGTGCAAATATGTCTCGGATTCAACTGCATCAAGCGTTGGCTGAATCCGAGGCAGAA TTTACCAACCTACTTCTTTCTCTTGGAGAAAGATCATTCCCAGGCCGACCTGAGAAAATG ACAGGTACGCTAAAGGAGCAGCTGAATTCCATCACACCAGCCCTGCAAGAAATGCAGATG AGAAAAGAAGCCAGACTGAAGCAGTTCAGAGAGGTTCAAACTGAGATACAAAGAATTGCC TCTGAAATAGCAGGACGCCCTGAGAATGAAGCCATCACAGTGAATCAAGAAGATCTGTCA CTAAAGAAACTCGAGGAGCACCAAAGTGAACTGCAAAGGCTTAAAAGAGAAAAGAGTGAT CGCCTGTGCAAAGTTGAAGAGTACAAGGTTCTCATTCACAACTACGCAAAGATTATGGGG ATGGATCCCTCAAAGATCCTCTCTAATGTCCACACAAGCTTGTTAGATGGCGCAAATGAT CAACAAACAAAAAACATCAGTGATGACATTCTTAACAAGCTCAACACCATGGTCCAGCAA CTTAAAGAAGAGAAGAACCAGAGAATGGACAAGCTCCATAGCCTTGGGAAAGCATTGACA AAATTATGGAATATTCTGGATACTAACATGGAAGAGCGCAGGCCATATGGTGAAATTAAG ATATATTCAATGACTTCAGGAAGCAGTATGCTAGGCCCAGGAAGCCTCACACTCGAGACA ATTCAGAAGATCGAATCTGAAGTTCAGCGACTAGACCATCTAAAGGCAAGCAAAATGAAA GAGCTCTTCATGATAAAGCAAACCGAGATAAAGGAAATTTGCAAGAAGTCACACATGGAT ATGCCTTACCAGACAGAGATGAACAAAATAATGGATGTGATAATGTCAGGGGATGTGGAC CATGATGATCTACTAAAGACAATGGATGAATATATATACAAAGTAAAAGAGGAGGCAACA AGTCGTAAAGAAATAATGGACAAGGTTGAAAAATGGATGGCTTCATGTGATGAAGAGAGA TGGCTAGAAGAATACAGCAGGGATGAGAGAAGGTATTCGATAAGCAGAGGAGCACATAAG CATTTGAAGCGTGCAGAGCGTGCTAGAATCATTGTGAACAAAATCCCAGGCCTGGTAGAA CTCTTAATGGCAAAGACAGAGATCTGGGAACAAGAGAGGGAAAAGGTCTTTCTACTACGA CGAGCTTCCCCTATTGGCCATGCTGAAAGACTACATGCTAACACTGAAGGAAAAGGAAGA GGAAAAATACAGGCAATGGGAGAATAA

Peptide Sequence

PEP ID	Os08t0531100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26448418:26452961:1 gene:Os08g0531100 transcript:Os08t0531100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:MAP65/ASE1 family protein. (Os08t0531100-01)
Sequence	MGSLKMTGKAPCAALPESSCAYLLQELKMIWDEVGQEENERERILQEIEQECQEVYRRKV NSANMSRIQLHQALAESEAEFTNLLLSLGERSFPGRPEKMTGTLKEQLNSITPALQEMQM RKEARLKQFREVQTEIQRIASEIAGRPENEAITVNQEDLSLKKLEEHQSELQRLKREKSD RLCKVEEYKVLIHNYAKIMGMDPSKILSNVHTSLLDGANDQQTKNISDDILNKLNTMVQQ LKEEKNQRMDKLHSLGKALTKLWNILDTNMEERRPYGEIKIYSMTSGSSMLGPGSLTLET IQKIESEVQRLDHLKASKMKELFMIKQTEIKEICKKSHMDMPYQTEMNKIMDVIMSGDVD HDDLLKTMDEYIYKVKEEATSRKEIMDKVEKWMASCDEERWLEEYSRDERRYSISRGAHK HLKRAERARIIVNKIPGLVELLMAKTEIWEQEREKVFLLRRASPIGHAERLHANTEGKGR GKIQAMGE

Transcript Sequence

Transcript ID	Os08t0531100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26448418:26452961:1 gene:Os08g0531100 gene_biotype:protein_coding transcript_biotype:protein_coding description:MAP65/ASE1 family protein. (Os08t0531100-01)
Sequence	AGCTTTTTCTGCCACACACTCACTACTTACACACATCTCTGCGCTCCAATGCATCCCCTA ACCAAGTAGTGCATCCAACTAAATTGCTCCCAGCAATCTTCGCCTTGGGATTTCCAGAAG ATGGGATCACTCAAGATGACTGGAAAAGCTCCCTGTGCAGCACTGCCAGAGTCCTCATGT GCCTACCTGCTTCAAGAACTGAAGATGATATGGGATGAAGTTGGGCAAGAAGAAAATGAA AGAGAGAGAATACTTCAAGAGATAGAGCAGGAATGCCAGGAAGTTTATAGGAGAAAAGTA AATAGTGCAAATATGTCTCGGATTCAACTGCATCAAGCGTTGGCTGAATCCGAGGCAGAA TTTACCAACCTACTTCTTTCTCTTGGAGAAAGATCATTCCCAGGCCGACCTGAGAAAATG ACAGGTACGCTAAAGGAGCAGCTGAATTCCATCACACCAGCCCTGCAAGAAATGCAGATG AGAAAAGAAGCCAGACTGAAGCAGTTCAGAGAGGTTCAAACTGAGATACAAAGAATTGCC TCTGAAATAGCAGGACGCCCTGAGAATGAAGCCATCACAGTGAATCAAGAAGATCTGTCA CTAAAGAAACTCGAGGAGCACCAAAGTGAACTGCAAAGGCTTAAAAGAGAAAAGAGTGAT CGCCTGTGCAAAGTTGAAGAGTACAAGGTTCTCATTCACAACTACGCAAAGATTATGGGG ATGGATCCCTCAAAGATCCTCTCTAATGTCCACACAAGCTTGTTAGATGGCGCAAATGAT CAACAAACAAAAAACATCAGTGATGACATTCTTAACAAGCTCAACACCATGGTCCAGCAA CTTAAAGAAGAGAAGAACCAGAGAATGGACAAGCTCCATAGCCTTGGGAAAGCATTGACA AAATTATGGAATATTCTGGATACTAACATGGAAGAGCGCAGGCCATATGGTGAAATTAAG ATATATTCAATGACTTCAGGAAGCAGTATGCTAGGCCCAGGAAGCCTCACACTCGAGACA ATTCAGAAGATCGAATCTGAAGTTCAGCGACTAGACCATCTAAAGGCAAGCAAAATGAAA GAGCTCTTCATGATAAAGCAAACCGAGATAAAGGAAATTTGCAAGAAGTCACACATGGAT ATGCCTTACCAGACAGAGATGAACAAAATAATGGATGTGATAATGTCAGGGGATGTGGAC CATGATGATCTACTAAAGACAATGGATGAATATATATACAAAGTAAAAGAGGAGGCAACA AGTCGTAAAGAAATAATGGACAAGGTTGAAAAATGGATGGCTTCATGTGATGAAGAGAGA TGGCTAGAAGAATACAGCAGGGATGAGAGAAGGTATTCGATAAGCAGAGGAGCACATAAG CATTTGAAGCGTGCAGAGCGTGCTAGAATCATTGTGAACAAAATCCCAGGCCTGGTAGAA CTCTTAATGGCAAAGACAGAGATCTGGGAACAAGAGAGGGAAAAGGTCTTTCTACTACGA CGAGCTTCCCCTATTGGCCATGCTGAAAGACTACATGCTAACACTGAAGGAAAAGGAAGA GGAAAAATACAGGCAATGGGAGAATAAAAAGGTACAGACTCAACTTGCAAGGAGGCATGA GAATTCATTTATATTAAGACCCAACACAAGCTGCAGTCGTCCATCAAGCAGAGGCTTCAA TACCAGCCCTGGCTCAAGTACTATTTGGAGCAGCAGACTTCCTACTATGGTTCAACAACC TAGTGCAGATAATTCCTCAGCTGAAAAAGATGTGCATATAAGAAAAGTTAGGAACAGAAG TATGCAGCGCGCGCTAGGAAATAACAGAAGCATCTCAATCTCTTATGAAGATAAAACACC AAGTCTCTCCGCAATAAAACAAGGCGTTTCACCAATTTGATTTTTTTTCCAAGTTCTTAT TTGGTCCATTAGATGTCTACGGTAAGTTATGTCTGGTGTGTGAAGATAGCACCATTGTTC GAAGCTTAAAAATGAATAGCAGTAGACACTAGACAATGTGTGCATTGATACCATAACCAT GTAATTATTGCCTTAATGCCTTGTCATACAGTAATCCTTTTATCCTTACACTTTTAGCTA TTTTTTAATGGTTCCCTTATCTGTTTTTGTACCAGCTAATTGCAAGTTCAACAACATCAG AAAGCACAAAAGAATAACTTACATTTCATTCT