Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0529100-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26342353:26344538:1 gene:Os08g0529100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6). (Os08t0529100-01)
Sequence	ATGGCGAGGTTCGAGGTGTACGAGAACAACGGCGGCACGTGCGTGGCCGTCGCCGGCGCC GACTACTGCGTGGTCGCCGCCGACACGCGCCTCTCCGTCGGATACAGCATCCTCAGCCGC GACAGCTCCAAGATCGCCCACCTAGCGGATAAATGTGTTTTGGCCTCATCTGGATTTCAA GGTGATGTTAAAGCTTTGCAGAGGAACCTTACTGCCAAGGAATTGCTTTATGAACACAAC CATAACAAGAAAATGAGCTGCCCTGCGATGGCGCAATTACTGTCCAACACGCTCTACTAC AAAAGGTTCTTCCCATACTATGCCTTCAATGTGTTGGGTGGACTTGACAGCGAAGGTAAA GGATGTGTCTTCACATATGATGCTGTTGGGTCTTATGAAAGGACAGGTTATAGTGCTCAG GGGACAGGTGCAGCTTTGATGATGCCTGTTCTGGACAATCAGCTAAAATCTCCTAGCCCA TTACTACTTCCAGCTCGGGATGCAGTGACACCATTATCTCAATCAGATGCTGTCGATCTG GTTAAGGACGTTTTTGCATCAGCCACAGAACGAGACATATACACTGGAGATAAACTGGAG ATTGTTGTCATCAACAGCGCCGGCTCTCACCGTGAGTTCATTGAGCTAAGGAAGGATTAG

Peptide Sequence

PEP ID	Os08t0529100-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26342353:26344538:1 gene:Os08g0529100 transcript:Os08t0529100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6). (Os08t0529100-01)
Sequence	MARFEVYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQ GDVKALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGK GCVFTYDAVGSYERTGYSAQGTGAALMMPVLDNQLKSPSPLLLPARDAVTPLSQSDAVDL VKDVFASATERDIYTGDKLEIVVINSAGSHREFIELRKD

Transcript Sequence

Transcript ID	Os08t0529100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26342353:26344538:1 gene:Os08g0529100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteasome subunit beta type 1 (EC 3.4.25.1) (20S proteasome alpha subunit F) (20S proteasome subunit beta-6). (Os08t0529100-01)
Sequence	GCCTCCCCGCGACGCCGCGCCGCCCCGCCCCGCCCGATCGCCGCCGCACTCGCCGCCCGT CCGCCTCGCCGCAACGCACCGCGCCACCGCGCCGCGCCAGCCTGAGGGAGAGAGAGAGAC GCCGAGGTTTGAGGTTGGTGAGGGAGCTGAGGCGGCGGGAGAAGGAGGAGGAGCGAGAGC GAGGGAGAGAGATCGATGGCGAGGTTCGAGGTGTACGAGAACAACGGCGGCACGTGCGTG GCCGTCGCCGGCGCCGACTACTGCGTGGTCGCCGCCGACACGCGCCTCTCCGTCGGATAC AGCATCCTCAGCCGCGACAGCTCCAAGATCGCCCACCTAGCGGATAAATGTGTTTTGGCC TCATCTGGATTTCAAGGTGATGTTAAAGCTTTGCAGAGGAACCTTACTGCCAAGGAATTG CTTTATGAACACAACCATAACAAGAAAATGAGCTGCCCTGCGATGGCGCAATTACTGTCC AACACGCTCTACTACAAAAGGTTCTTCCCATACTATGCCTTCAATGTGTTGGGTGGACTT GACAGCGAAGGTAAAGGATGTGTCTTCACATATGATGCTGTTGGGTCTTATGAAAGGACA GGTTATAGTGCTCAGGGGACAGGTGCAGCTTTGATGATGCCTGTTCTGGACAATCAGCTA AAATCTCCTAGCCCATTACTACTTCCAGCTCGGGATGCAGTGACACCATTATCTCAATCA GATGCTGTCGATCTGGTTAAGGACGTTTTTGCATCAGCCACAGAACGAGACATATACACT GGAGATAAACTGGAGATTGTTGTCATCAACAGCGCCGGCTCTCACCGTGAGTTCATTGAG CTAAGGAAGGATTAGCGTGGGATACTATCAAACCACCTCGTACCTGTGCAACAACAATAC CATTCAGTTACTAGCAGAATGTGCCTTTTCCTTGCCAGATGTATTTAAATTACCGTTGTA TTATTCAGTGTTCACCATTATTACGGAAGTGGTTACGTAAGACATTTTGTAGTCTTTCTA TCTGAACTATGCGTATCTGAATTGCTCACTGAATTTTTCTTGC