Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0529000-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26331939:26335725:-1 gene:Os08g0529000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 5B description:Auxin efflux carrier, Auxin homeostasis, transport and distribution (Os08t0529000-01)
Sequence	ATGATAGGATGGGGAGATGTGTACAAGGTGGTGGGGGCAATGGCGCCGCTGTACTTCGCG CTGGGGCTAGGGTACGGGTCGGTGAGGTGGTGGAGGTTCTTCACGGCGGAGCAGTGCGCC GCCATCAACACCATGGTGGTCTACTTCTCCATGCCCTTCTTCACCTTCGACTTCGTCGTC CGCACCGACCCGTTCGCCATGAACTACCGCGTCATCGCCGCCGACGCGGTGTCCAAGGCG ATCGCCATCGCCGCCATGGCGGCGTGGGCGCGCACGCGCTGCGGCTGCGCCGCCGCCAAG GCCGGGGCGCAGTCGTGGTCCATCACCGGGTTCTCCCTCGCCGCGCTCAACAACACGCTC GTCGTCGGCGTGCCGCTGCTCGACGCCATGTACGGGAGGTGGGCGCAGGACCTCGTGGTG CAGATCGCCGTCGTGCAGTCCATGGTGTGGTTCCCGCTCCTGCTCATGGCGTTCGAGCTC CGCAAGGCCTGGGTCGTCGGCGGCGGCGGCGGCGTCGGGCCGGCGGTGATGTCGTCGTCG TCGCCGCCGGAGAAGCAGAGCGACGTCGAGATGAACGGCGCCGTCGTCGCGGCGCCGGGC GGCGGCGGCGGCGTCCGGCTACCGTTCTGGGCGACGGCGAGGACGGTGGGGCTGAAGCTG GCGAGGAACCCGAACGTGTACGCCAGCGTTCTCGGCGTCGTGTGGGCGTGCATCGCGTAC AGGTGGCACCTGAGCTTGCCGGGGATCGTGACGGGGTCGCTGCAGGTGATGTCCAGGACT GGCACGGGGATGTCCATGTTCAGCATGGGGTTGTTCATGGGGCAGCAGGAGAGGGTGATA GCGTGCGGGGCGGGGCTGACGGCGCTGGGGATGGCGCTGCGGTTCGTCGCCGGTCCGCTC GCCACGCTCGTCGGCGCCGCCGCCCTCGGCCTCCGCGGCGACGTCCTGCACCTCGCCATC ATACAGGCCGCACTGCCTCAATCGATTGCTTCCTTCGTTTTCGCAAAGGAGTATGGGCTT CATGCCGATGTACTCAGCACGGCGGTTATATTCGGAACATTGATCTCTCTGCCGATTCTG ATTGCATATTACGCGGTTCTGGGCTTTGTCTAA

Peptide Sequence

PEP ID	Os08t0529000-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26331939:26335725:-1 gene:Os08g0529000 transcript:Os08t0529000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 5B description:Auxin efflux carrier, Auxin homeostasis, transport and distribution (Os08t0529000-01)
Sequence	MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVV RTDPFAMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTL VVGVPLLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKAWVVGGGGGVGPAVMSSS SPPEKQSDVEMNGAVVAAPGGGGGVRLPFWATARTVGLKLARNPNVYASVLGVVWACIAY RWHLSLPGIVTGSLQVMSRTGTGMSMFSMGLFMGQQERVIACGAGLTALGMALRFVAGPL ATLVGAAALGLRGDVLHLAIIQAALPQSIASFVFAKEYGLHADVLSTAVIFGTLISLPIL IAYYAVLGFV

Transcript Sequence

Transcript ID	Os08t0529000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26331939:26335725:-1 gene:Os08g0529000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 5B description:Auxin efflux carrier, Auxin homeostasis, transport and distribution (Os08t0529000-01)
Sequence	ATGAATTCCCAGTTCAGAGTTTCAGGTACTCTCAATCTGAAACATATAGAGGAGCTAGTA GCAAAGAGAAGTAATTAGAGTGAGCTTAAGTAGTAATTAATTAGAGGAGGTTAATTAATT AGGGAAGATGATAGGATGGGGAGATGTGTACAAGGTGGTGGGGGCAATGGCGCCGCTGTA CTTCGCGCTGGGGCTAGGGTACGGGTCGGTGAGGTGGTGGAGGTTCTTCACGGCGGAGCA GTGCGCCGCCATCAACACCATGGTGGTCTACTTCTCCATGCCCTTCTTCACCTTCGACTT CGTCGTCCGCACCGACCCGTTCGCCATGAACTACCGCGTCATCGCCGCCGACGCGGTGTC CAAGGCGATCGCCATCGCCGCCATGGCGGCGTGGGCGCGCACGCGCTGCGGCTGCGCCGC CGCCAAGGCCGGGGCGCAGTCGTGGTCCATCACCGGGTTCTCCCTCGCCGCGCTCAACAA CACGCTCGTCGTCGGCGTGCCGCTGCTCGACGCCATGTACGGGAGGTGGGCGCAGGACCT CGTGGTGCAGATCGCCGTCGTGCAGTCCATGGTGTGGTTCCCGCTCCTGCTCATGGCGTT CGAGCTCCGCAAGGCCTGGGTCGTCGGCGGCGGCGGCGGCGTCGGGCCGGCGGTGATGTC GTCGTCGTCGCCGCCGGAGAAGCAGAGCGACGTCGAGATGAACGGCGCCGTCGTCGCGGC GCCGGGCGGCGGCGGCGGCGTCCGGCTACCGTTCTGGGCGACGGCGAGGACGGTGGGGCT GAAGCTGGCGAGGAACCCGAACGTGTACGCCAGCGTTCTCGGCGTCGTGTGGGCGTGCAT CGCGTACAGGTGGCACCTGAGCTTGCCGGGGATCGTGACGGGGTCGCTGCAGGTGATGTC CAGGACTGGCACGGGGATGTCCATGTTCAGCATGGGGTTGTTCATGGGGCAGCAGGAGAG GGTGATAGCGTGCGGGGCGGGGCTGACGGCGCTGGGGATGGCGCTGCGGTTCGTCGCCGG TCCGCTCGCCACGCTCGTCGGCGCCGCCGCCCTCGGCCTCCGCGGCGACGTCCTGCACCT CGCCATCATACAGGCCGCACTGCCTCAATCGATTGCTTCCTTCGTTTTCGCAAAGGAGTA TGGGCTTCATGCCGATGTACTCAGCACGGCGGTTATATTCGGAACATTGATCTCTCTGCC GATTCTGATTGCATATTACGCGGTTCTGGGCTTTGTCTAACATGCATTTACAGCACGGCA TGCTTACTTATATTAGATTTGCTTCGGTCCAACAAAAATTATCTCGAGATACCGATACCT CACGGTACCGATAACTCATCTGCTCAGCTAGATCCAACGATCGAAAATAATTTGGTACCG TGAGGTACCGGTATTTCGAGATACTTTTTGTTGGACGATAACAAACCTCTAATTACATTG GATGCTGAGATCTAAACCAATGTGGAGCGTCAATGACGCAACAGAAGGATGTTAATTAAT CAGAGTACTTCAGCAATAGAGAGTTTCAGTGTTGCAAGCTCTGATTAATGATCTAATATT CCAATTAGTCGATATTGTATTTCGAGCAAAGTAAATAATAAAGTTTTCAACAGTTTTGCT ACCT