Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os08t0528500-01
CDS Infomation

cds chromosome:IRGSP-1.0:8:26307444:26310379:-1 gene:Os08g0528500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os08t0528500-01)
Sequence

ATGGCTAGACGCGTCAGCACCACCCGCCTCCTCCTCCTCCTCCTCCTCGTCGCCGCCGCG
GCGGCGGCGGCGGCGGCCGGAGACCAGGAGGACCCGCGTGGCGGCGGCGACAACGGCACC
GCCCGCTTGGATCGCCGCACCAAGATGTTCCTGCACGCGGCGCGGGCGAGCGACGGCGGC
GCCACGGGGATGGAGAAGGCCGGGCTGGGTCTCTTCGACGCCTTCTTCGCTAGCTTGTCC
ATGATTCTGGTCAGCGAGATTGGGGATGAGACCTTCATCATCGCCGCGCTGATGGCGATG
CGCCACCCCAAATCCACCGTGCTCTCAGGCGCTCTGTCGGCGCTGGTCGTTATGACCATC
TTGTCCACCGGGCTTGGCAGAATCGTTCCAAATTTGATATCCAGGAAGCACACTAACAGC
GCAGCAACTGTCCTTTATGCGTTCTTTGGGCTACGGCTGCTGTACATTGCTTGGAGGTCA
GATTCTAAGGCATCACAAAAGAAGGAAATTGAAGAAGTAGAGGAAAAGCTGGAAGCAGGA
CAAGGGAAATCAACATTTAGACGCATCTTCTCAAGGTTCTGTACTCCTATTTTTTTGGAG
TCGTTTGTGTTGACCTTCCTGGCGGAGTGGGGCGACCGAAGTCAGATTGCCACAATTGCG
TTGGCCACTCACAAAAATGCGGTAGGGGTCGCTGTGGGAGCAACCTTGGGGCACACCATC
TGCACATCGTTCGCTGTGGTGGGTGGCAGCATGCTGGCATCCAAGATATCTCAGGGCACA
GTGGCCACCATTGGAGGCCTCCTCTTCCTTGGCTTCTCTCTGTCATCATATTTCTACCCA
CCATTGTGA

Peptide Sequence

PEP ID

Os08t0528500-01
PEP Infomation

pep chromosome:IRGSP-1.0:8:26307444:26310379:-1 gene:Os08g0528500 transcript:Os08t0528500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os08t0528500-01)
Sequence

MARRVSTTRLLLLLLLVAAAAAAAAAGDQEDPRGGGDNGTARLDRRTKMFLHAARASDGG
ATGMEKAGLGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTI
LSTGLGRIVPNLISRKHTNSAATVLYAFFGLRLLYIAWRSDSKASQKKEIEEVEEKLEAG
QGKSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNAVGVAVGATLGHTI
CTSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL

Transcript Sequence

Transcript ID

Os08t0528500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:8:26307444:26310379:-1 gene:Os08g0528500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0016 domain containing protein. (Os08t0528500-01)
Sequence

AATCCATCTCAAACACTGGCGCGTCGGCGGTCAGTGGCCCGTCCACTCGGCCCCTCCTCT
TTTTAACTCTCTCTCTCTCTCTCTCCGGCCGCCACCCCCTCGCCGCGCCGACGTCTCGCC
TCCGCCGCCTCGTTCTCGTTCCGATGGCTAGACGCGTCAGCACCACCCGCCTCCTCCTCC
TCCTCCTCCTCGTCGCCGCCGCGGCGGCGGCGGCGGCGGCCGGAGACCAGGAGGACCCGC
GTGGCGGCGGCGACAACGGCACCGCCCGCTTGGATCGCCGCACCAAGATGTTCCTGCACG
CGGCGCGGGCGAGCGACGGCGGCGCCACGGGGATGGAGAAGGCCGGGCTGGGTCTCTTCG
ACGCCTTCTTCGCTAGCTTGTCCATGATTCTGGTCAGCGAGATTGGGGATGAGACCTTCA
TCATCGCCGCGCTGATGGCGATGCGCCACCCCAAATCCACCGTGCTCTCAGGCGCTCTGT
CGGCGCTGGTCGTTATGACCATCTTGTCCACCGGGCTTGGCAGAATCGTTCCAAATTTGA
TATCCAGGAAGCACACTAACAGCGCAGCAACTGTCCTTTATGCGTTCTTTGGGCTACGGC
TGCTGTACATTGCTTGGAGGTCAGATTCTAAGGCATCACAAAAGAAGGAAATTGAAGAAG
TAGAGGAAAAGCTGGAAGCAGGACAAGGGAAATCAACATTTAGACGCATCTTCTCAAGGT
TCTGTACTCCTATTTTTTTGGAGTCGTTTGTGTTGACCTTCCTGGCGGAGTGGGGCGACC
GAAGTCAGATTGCCACAATTGCGTTGGCCACTCACAAAAATGCGGTAGGGGTCGCTGTGG
GAGCAACCTTGGGGCACACCATCTGCACATCGTTCGCTGTGGTGGGTGGCAGCATGCTGG
CATCCAAGATATCTCAGGGCACAGTGGCCACCATTGGAGGCCTCCTCTTCCTTGGCTTCT
CTCTGTCATCATATTTCTACCCACCATTGTGAATTTTGTGATGAACTGATGACATCCTAC
CAAGGGGGTGTATATTCCGTTGCAGCCAAGCATGCTGGCTTGAAATATAAACGCAGGCGC
TACAT