Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0528100-00
CDS Infomation	cds chromosome:IRGSP-1.0:8:26293690:26297999:-1 gene:Os08g0528100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os08t0528100-00)
Sequence	ATGAACGAGGAGAAGAGGGCGAGGGTGGGGGATACTGCCGAGACCCCGCGGAAATCCCCT CGCCTGGATCGGCCAGCTGCGGCGGCGGCGGCGGCGGCGCCGTTAACCAGCAACGGCGTG ATGGGCGAGAAGAAGAAGAAGAATGCGACGCGGGATGTGAGCGATTGGTGTTGGTGGGGG AAAGCGGCGGCATTACTATCCGGCGGCGACCGCCGTACTCGACGGTGCCGCCATGTCTTG TGTGAGCAGGCTGACATTGATGTGGCCATAACACTGATCAAGACCCGCGTTGACACCCCG GTGTGTTGTGTTAACAAGTGTGATGATACTGAGGGGAGGGAAATCTCGGTGTGTTTGGAT TGCCAGTTGAGTTTCTGCACGGCACACGGGAAGCCGCACGTCTTTATGAACGACCATTGG ATTGCTCTGGTGTACAAGAGGCCCAATGTGGCGCATTGCTTCGCGTGTGAAGAGTGCTAT TTCATCAGAACCGACAGTCTCGGGGAGGGAATGGCGGTCGGTGAGAATGGCTTCTCCATC GGTACCCATAAGAAGGATGAGAAGGGAATGACGACGGTCAACAATGAGGCAGGTGTTCAT GCATCTATGGTGTCTGATTATGAAAGCGCCCTCATGGTGGCTTTACTCAGTGATGTCGGT ACTCCACGGTGCAGGCATGACATGTATAACAAGGATGAGGTTGATTTGGTCCAAAGACGG ATCATGTTCTGCGATATCACCAGAATGTGTAGTGATTGTGACAACATCAGTGTGCTTATG ATCTTTGTGTGCTTGGGATGTGAAAAGCCTTTCTGCACTGTACACTCCAGTTTACATGCT GAGAGCACCAAGCATTTGGTTGGTCTGGTGTACCATAACCCGTATGTGGCGTGCTGCTTC CTGTGTAGTGAAACCTTTGTCCTCATTGGTGAGGGGGATAAGAGGATGCCAGTTGACAAA GCGGCAGGTGGTTATGCATCTGAGTCAGTTATTGGGCATGCCCATGCTATCAAAGGGATA CCGAATCTTGGAAACACTTGCTACTTGAATTCATTGATGCAGTGCCTCCTTGTGCTTGGA AAACTGCGGGCAAGGATGTTAGGACCGGACGCTCCATCAGGGACCCTTGGTACTGCATTG CATGACCTCTTTGAGCAAACATACAGTGTGAATAATGCAACAGGCCTGCTGGAGACGTCA TTGCTCTTGGATTGTGTATGCAATTTGGACCCACAGTTCGTAGGAGGTTTTATGCATGAT AACCATGAATTGCTTTGCTGTTTACGTAAAAATTTGGATGAGGAGGAGAGGATGAGGACG CCTCCTAACATGCAAGACAGTTCTGCTGGTGCAGTGCCTCCTACGGTTTTTAATTCCATT TTCGGTGGTCAGCTATTTGTTACCAGATCGTGCAAATGTTGCTCGTTTTGTTCAGTTTCC CACGCTGTATTCTATGATCTCTCAGTACCAGTACCACCGAAGAAGCCTCCAGCCAAAAGT GTTGAATCAACACCATGGATTGAAGGTCACAGATCTCAACCGAAGATTTGTATCAACCAG TTTGAAGCAATACATAAGAGGAACACAGAAAAGACTCATAGAATTGTTGAAGATGCCGAT TCTGATCCTGCTTCAGAATTGAAAGATATGGTCATGGTGAAAACATCAGAGCCATTGGAA GTTGATTATACTGAAGTGGAACAGATCTCACAAAGCAAGGACTATGTACAAGATCCTCAA AATGTGTTGGCTGATGTCAAAACTGCAGGAATGGATGCGACAACAACAGATACCCGCATT CCAGAATATATAGGGCCACATCCACCTGTCTCTCAATTAAGGGAAGAGAATGCACAGTTA GAATCATGCAATGATGTGGGGAAAGATGGCAATGCTATTCTCGAAGTTAGTTCAGAACAC AAGATAGACACTTTCTCAGCAGAAGTTACTACAGAAGACAAGGGGAAAACTTGCAGTAGT GACGTTGTTTGTGGAAAGGCACAGGATATCGACTCTCTTCCATCGATTACGAAGATGATA GAATGGACCTGTGAGAACTGCTCCAAAGGTGCTCGGAAGTCAGATGTCACTGAAGGTACA TACAGTGAACAGATGCTGTCAAGTACTAATGAGGACACAGCAGTTGGTGGATACCAGAGG GAACAGTCAGAGAAGATAACATGCCAAAGTGAGCAATCCAACAAAAAACCTGAATGCCCT GAAGGTGTTCAAGACGCTGTACCTCATTGTGTCCCAGCTGAGAGACAGGACAACCTGTTG AGCAGTCAGGATCAAAATGCCACCACACTAGATGAAGGAAGGGGTAAGCAAAAGCTTCAT CATAGTGCACACCAAGTCGAAGAATGCCAAAATGAGCAGAAAGATAGGAATAAAGGTGCT ACTCAAACACGGATTAGCAAGTTGCCACTTGTGTTAACCATTCATCTGATGAGATCTTTG TTGGGGCCTGATAAGGTGATGGGACATGTGAGCTTTAAGGAAATCCTTGATATGGGACTG TTCATGGACCCCAGCTCTGAAGACAAAGATAATTCCATTTATCGTCTAGCTGGTGTTATT GAGCACCATGGCCGCGGCAAAGATTCAGGGCACTTTGTTGCTTATGTGAGACCAAGTCCT CGGCAGCAGACCAATGGTTCTTCCTCATGGTTTTGTGCAAGTGATACCGACATCAGAGAA GTCTCTTTAGAAGAAGTTCTCAAGTGCGAGGCTTACCTTCTTTTCTACGAGAGGATGGAA GGCTGA

Peptide Sequence

PEP ID	Os08t0528100-00
PEP Infomation	pep chromosome:IRGSP-1.0:8:26293690:26297999:-1 gene:Os08g0528100 transcript:Os08t0528100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os08t0528100-00)
Sequence	MNEEKRARVGDTAETPRKSPRLDRPAAAAAAAAPLTSNGVMGEKKKKNATRDVSDWCWWG KAAALLSGGDRRTRRCRHVLCEQADIDVAITLIKTRVDTPVCCVNKCDDTEGREISVCLD CQLSFCTAHGKPHVFMNDHWIALVYKRPNVAHCFACEECYFIRTDSLGEGMAVGENGFSI GTHKKDEKGMTTVNNEAGVHASMVSDYESALMVALLSDVGTPRCRHDMYNKDEVDLVQRR IMFCDITRMCSDCDNISVLMIFVCLGCEKPFCTVHSSLHAESTKHLVGLVYHNPYVACCF LCSETFVLIGEGDKRMPVDKAAGGYASESVIGHAHAIKGIPNLGNTCYLNSLMQCLLVLG KLRARMLGPDAPSGTLGTALHDLFEQTYSVNNATGLLETSLLLDCVCNLDPQFVGGFMHD NHELLCCLRKNLDEEERMRTPPNMQDSSAGAVPPTVFNSIFGGQLFVTRSCKCCSFCSVS HAVFYDLSVPVPPKKPPAKSVESTPWIEGHRSQPKICINQFEAIHKRNTEKTHRIVEDAD SDPASELKDMVMVKTSEPLEVDYTEVEQISQSKDYVQDPQNVLADVKTAGMDATTTDTRI PEYIGPHPPVSQLREENAQLESCNDVGKDGNAILEVSSEHKIDTFSAEVTTEDKGKTCSS DVVCGKAQDIDSLPSITKMIEWTCENCSKGARKSDVTEGTYSEQMLSSTNEDTAVGGYQR EQSEKITCQSEQSNKKPECPEGVQDAVPHCVPAERQDNLLSSQDQNATTLDEGRGKQKLH HSAHQVEECQNEQKDRNKGATQTRISKLPLVLTIHLMRSLLGPDKVMGHVSFKEILDMGL FMDPSSEDKDNSIYRLAGVIEHHGRGKDSGHFVAYVRPSPRQQTNGSSSWFCASDTDIRE VSLEEVLKCEAYLLFYERMEG

Transcript Sequence

Transcript ID	Os08t0528100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26293690:26297999:-1 gene:Os08g0528100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os08t0528100-00)
Sequence	ATGAACGAGGAGAAGAGGGCGAGGGTGGGGGATACTGCCGAGACCCCGCGGAAATCCCCT CGCCTGGATCGGCCAGCTGCGGCGGCGGCGGCGGCGGCGCCGTTAACCAGCAACGGCGTG ATGGGCGAGAAGAAGAAGAAGAATGCGACGCGGGATGTGAGCGATTGGTGTTGGTGGGGG AAAGCGGCGGCATTACTATCCGGCGGCGACCGCCGTACTCGACGGTGCCGCCATGTCTTG TGTGAGCAGGCTGACATTGATGTGGCCATAACACTGATCAAGACCCGCGTTGACACCCCG GTGTGTTGTGTTAACAAGTGTGATGATACTGAGGGGAGGGAAATCTCGGTGTGTTTGGAT TGCCAGTTGAGTTTCTGCACGGCACACGGGAAGCCGCACGTCTTTATGAACGACCATTGG ATTGCTCTGGTGTACAAGAGGCCCAATGTGGCGCATTGCTTCGCGTGTGAAGAGTGCTAT TTCATCAGAACCGACAGTCTCGGGGAGGGAATGGCGGTCGGTGAGAATGGCTTCTCCATC GGTACCCATAAGAAGGATGAGAAGGGAATGACGACGGTCAACAATGAGGCAGGTGTTCAT GCATCTATGGTGTCTGATTATGAAAGCGCCCTCATGGTGGCTTTACTCAGTGATGTCGGT ACTCCACGGTGCAGGCATGACATGTATAACAAGGATGAGGTTGATTTGGTCCAAAGACGG ATCATGTTCTGCGATATCACCAGAATGTGTAGTGATTGTGACAACATCAGTGTGCTTATG ATCTTTGTGTGCTTGGGATGTGAAAAGCCTTTCTGCACTGTACACTCCAGTTTACATGCT GAGAGCACCAAGCATTTGGTTGGTCTGGTGTACCATAACCCGTATGTGGCGTGCTGCTTC CTGTGTAGTGAAACCTTTGTCCTCATTGGTGAGGGGGATAAGAGGATGCCAGTTGACAAA GCGGCAGGTGGTTATGCATCTGAGTCAGTTATTGGGCATGCCCATGCTATCAAAGGGATA CCGAATCTTGGAAACACTTGCTACTTGAATTCATTGATGCAGTGCCTCCTTGTGCTTGGA AAACTGCGGGCAAGGATGTTAGGACCGGACGCTCCATCAGGGACCCTTGGTACTGCATTG CATGACCTCTTTGAGCAAACATACAGTGTGAATAATGCAACAGGCCTGCTGGAGACGTCA TTGCTCTTGGATTGTGTATGCAATTTGGACCCACAGTTCGTAGGAGGTTTTATGCATGAT AACCATGAATTGCTTTGCTGTTTACGTAAAAATTTGGATGAGGAGGAGAGGATGAGGACG CCTCCTAACATGCAAGACAGTTCTGCTGGTGCAGTGCCTCCTACGGTTTTTAATTCCATT TTCGGTGGTCAGCTATTTGTTACCAGATCGTGCAAATGTTGCTCGTTTTGTTCAGTTTCC CACGCTGTATTCTATGATCTCTCAGTACCAGTACCACCGAAGAAGCCTCCAGCCAAAAGT GTTGAATCAACACCATGGATTGAAGGTCACAGATCTCAACCGAAGATTTGTATCAACCAG TTTGAAGCAATACATAAGAGGAACACAGAAAAGACTCATAGAATTGTTGAAGATGCCGAT TCTGATCCTGCTTCAGAATTGAAAGATATGGTCATGGTGAAAACATCAGAGCCATTGGAA GTTGATTATACTGAAGTGGAACAGATCTCACAAAGCAAGGACTATGTACAAGATCCTCAA AATGTGTTGGCTGATGTCAAAACTGCAGGAATGGATGCGACAACAACAGATACCCGCATT CCAGAATATATAGGGCCACATCCACCTGTCTCTCAATTAAGGGAAGAGAATGCACAGTTA GAATCATGCAATGATGTGGGGAAAGATGGCAATGCTATTCTCGAAGTTAGTTCAGAACAC AAGATAGACACTTTCTCAGCAGAAGTTACTACAGAAGACAAGGGGAAAACTTGCAGTAGT GACGTTGTTTGTGGAAAGGCACAGGATATCGACTCTCTTCCATCGATTACGAAGATGATA GAATGGACCTGTGAGAACTGCTCCAAAGGTGCTCGGAAGTCAGATGTCACTGAAGGTACA TACAGTGAACAGATGCTGTCAAGTACTAATGAGGACACAGCAGTTGGTGGATACCAGAGG GAACAGTCAGAGAAGATAACATGCCAAAGTGAGCAATCCAACAAAAAACCTGAATGCCCT GAAGGTGTTCAAGACGCTGTACCTCATTGTGTCCCAGCTGAGAGACAGGACAACCTGTTG AGCAGTCAGGATCAAAATGCCACCACACTAGATGAAGGAAGGGGTAAGCAAAAGCTTCAT CATAGTGCACACCAAGTCGAAGAATGCCAAAATGAGCAGAAAGATAGGAATAAAGGTGCT ACTCAAACACGGATTAGCAAGTTGCCACTTGTGTTAACCATTCATCTGATGAGATCTTTG TTGGGGCCTGATAAGGTGATGGGACATGTGAGCTTTAAGGAAATCCTTGATATGGGACTG TTCATGGACCCCAGCTCTGAAGACAAAGATAATTCCATTTATCGTCTAGCTGGTGTTATT GAGCACCATGGCCGCGGCAAAGATTCAGGGCACTTTGTTGCTTATGTGAGACCAAGTCCT CGGCAGCAGACCAATGGTTCTTCCTCATGGTTTTGTGCAAGTGATACCGACATCAGAGAA GTCTCTTTAGAAGAAGTTCTCAAGTGCGAGGCTTACCTTCTTTTCTACGAGAGGATGGAA GGCTGA