Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0527400-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26253487:26256814:-1 gene:Os08g0527400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os08t0527400-01)
Sequence	ATGACTCGTCGCCGATCGCGCCCTCGCCGATTCGGAGCCATCCCCGCGTATTCCGGCGCG ATGGAAGAGGAGAAGAGGGCAAGGGCGGCGGAAAGGGATAGGGCTATCGTCAGGAGCCCG CGGAAAGGGAAAGCCCCGCGGATCGAGCCGCTGGATGCGGATGATTCTGGATGGGGCGGC GATGCCTCGCTGGAGGTGTACAGGGAGGCCGCGGCGGTGGCAACCAGAGGCGGCGCCGGC GGCGGCGGCGAGCGGTGCGAGCACATGACCTGCAGCGAGCATGACGTTGCGGAAATCGTG TCCAAGATTGCGTCCTGGGGCGACCCGGTGTGCCAGGATGAAACCTGTATGTGCACCGAG AGGCACCTCATGATGGTGTGCGTGGAATGCGATATGCATTTCTGCATTGGAAGGTTTGCC AAGAAGTCTAAGCCGCGAGGACACATCGAGGAGCATGCGTTCGACGATGGGCATCCGGTT GCGCTGTGGTACGAAGATCCGTATACTGGTTACTGCTTTGAGTGTGAGGATCCCTTGACC ATTGGTGGTGAGGAGGGTGATAAGGGAATGAAGGTCAAAGGCGAGGAAGGCTGTCGCGCA TCTGGGTCTGATAGTGGGCATGGCTGTGTCATCGGCGCATCTGGGTCTGGTAGTGGGCAT GGCTGTGCCATCAGAGGGATACCGAATTTTGGAAACACTTGCTACTTGAATGCGGTGTTG CAGTGCCTCCTTGTGCTTGGAAAGCTGCGGGCAAGGATGTCTGGACCGGACGCTCCGCCT CCATCGGGGATGCTTGGTATAATACTGCATGATCTCTTTGTTGCTACAGAAAGTGTGAGC TATACACGAGACCTGCTGGACCCAGTGATGCTCTTGGGTTGTGTGCGCCACTATAAATCA GAGTTCCAAGGCAATACTATGCAAGACAGCCATGAATTGCTTTGCTGTTTGCGTGATAGT TTGATTGAGGAGGAAAGTAAAACGAGGCCTGATAACATGCAACAGGATGCTCCTAGTGCT GTGGTTCCTACAGTTATTGATTCCATATTTCGTGGTCAGCTGTTTGTTACCACTCTGTGC AAATATTGCTCATTTGAGTCAGTTTCACAGGGTTCACAGGATGCATTCTATGATCTCTGT GTGGCATTACCACTACAGAATGAAAGATGCATATCTCAACAGAAGATTGCCATCGAACAA TTTCCAACAATTGACAAGACTAACACCGAAAAGATTCATGCAATTTCTGGAGGCAGTGAT CCTCAGGTTCCCGCTTCAGAATTGGGAGATATGGTCATGGTGAAAACATCAGAGCCTTTG GTAGTTGGTAAGTTTATGTGTTCCTGTACCTAA

Peptide Sequence

PEP ID	Os08t0527400-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26253487:26256814:-1 gene:Os08g0527400 transcript:Os08t0527400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os08t0527400-01)
Sequence	MTRRRSRPRRFGAIPAYSGAMEEEKRARAAERDRAIVRSPRKGKAPRIEPLDADDSGWGG DASLEVYREAAAVATRGGAGGGGERCEHMTCSEHDVAEIVSKIASWGDPVCQDETCMCTE RHLMMVCVECDMHFCIGRFAKKSKPRGHIEEHAFDDGHPVALWYEDPYTGYCFECEDPLT IGGEEGDKGMKVKGEEGCRASGSDSGHGCVIGASGSGSGHGCAIRGIPNFGNTCYLNAVL QCLLVLGKLRARMSGPDAPPPSGMLGIILHDLFVATESVSYTRDLLDPVMLLGCVRHYKS EFQGNTMQDSHELLCCLRDSLIEEESKTRPDNMQQDAPSAVVPTVIDSIFRGQLFVTTLC KYCSFESVSQGSQDAFYDLCVALPLQNERCISQQKIAIEQFPTIDKTNTEKIHAISGGSD PQVPASELGDMVMVKTSEPLVVGKFMCSCT

Transcript Sequence

Transcript ID	Os08t0527400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26253487:26256814:-1 gene:Os08g0527400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ubiquitin carboxyl-terminal hydrolase. (Os08t0527400-01)
Sequence	AAAAACCTCTCGTGATCTCGTCGGCGTTGTCGTCGCGGGCGCCGCAGCGTCGATGACTCG TCGCCGATCGCGCCCTCGCCGATTCGGAGCCATCCCCGCGTATTCCGGCGCGATGGAAGA GGAGAAGAGGGCAAGGGCGGCGGAAAGGGATAGGGCTATCGTCAGGAGCCCGCGGAAAGG GAAAGCCCCGCGGATCGAGCCGCTGGATGCGGATGATTCTGGATGGGGCGGCGATGCCTC GCTGGAGGTGTACAGGGAGGCCGCGGCGGTGGCAACCAGAGGCGGCGCCGGCGGCGGCGG CGAGCGGTGCGAGCACATGACCTGCAGCGAGCATGACGTTGCGGAAATCGTGTCCAAGAT TGCGTCCTGGGGCGACCCGGTGTGCCAGGATGAAACCTGTATGTGCACCGAGAGGCACCT CATGATGGTGTGCGTGGAATGCGATATGCATTTCTGCATTGGAAGGTTTGCCAAGAAGTC TAAGCCGCGAGGACACATCGAGGAGCATGCGTTCGACGATGGGCATCCGGTTGCGCTGTG GTACGAAGATCCGTATACTGGTTACTGCTTTGAGTGTGAGGATCCCTTGACCATTGGTGG TGAGGAGGGTGATAAGGGAATGAAGGTCAAAGGCGAGGAAGGCTGTCGCGCATCTGGGTC TGATAGTGGGCATGGCTGTGTCATCGGCGCATCTGGGTCTGGTAGTGGGCATGGCTGTGC CATCAGAGGGATACCGAATTTTGGAAACACTTGCTACTTGAATGCGGTGTTGCAGTGCCT CCTTGTGCTTGGAAAGCTGCGGGCAAGGATGTCTGGACCGGACGCTCCGCCTCCATCGGG GATGCTTGGTATAATACTGCATGATCTCTTTGTTGCTACAGAAAGTGTGAGCTATACACG AGACCTGCTGGACCCAGTGATGCTCTTGGGTTGTGTGCGCCACTATAAATCAGAGTTCCA AGGCAATACTATGCAAGACAGCCATGAATTGCTTTGCTGTTTGCGTGATAGTTTGATTGA GGAGGAAAGTAAAACGAGGCCTGATAACATGCAACAGGATGCTCCTAGTGCTGTGGTTCC TACAGTTATTGATTCCATATTTCGTGGTCAGCTGTTTGTTACCACTCTGTGCAAATATTG CTCATTTGAGTCAGTTTCACAGGGTTCACAGGATGCATTCTATGATCTCTGTGTGGCATT ACCACTACAGAATGAAAGATGCATATCTCAACAGAAGATTGCCATCGAACAATTTCCAAC AATTGACAAGACTAACACCGAAAAGATTCATGCAATTTCTGGAGGCAGTGATCCTCAGGT TCCCGCTTCAGAATTGGGAGATATGGTCATGGTGAAAACATCAGAGCCTTTGGTAGTTGG TAAGTTTATGTGTTCCTGTACCTAACTAAATAAAGGAAAATGATGTTGAACAGGCCTGAA AACGTGCGTGTGAATTGGAAGACGGAACATTTTGTTGATGGTTGCGGCAAACTGTGATAC TACCACTATTGTTTGTTATTTTGTTGCTCAACATGAGAAAAAGGATATTTTAGGAGCAGC ACTCTTTTGGTAGCTAAATAGAGAAAATTGCTTAAGGTATGATTCATGCATGGACTGCAG AAATACCAGAACCTTCAGAATGTCAGCATTATACAAACAGGATGTTCCAGCAGTTTCAGC ATGGCAAACAGTTTGCTACAGTGTTTCATCAATAGCTCAGGGTGTTGAATCCTTGTCATA TAATTAATTTTACTCCGAATTGTTGGTTAGCTTAAGTACATGCAGAGATCCTTGAAGAAA ATAGTCTTTCAAATAATCAAATGTAGGGGATAAAGATTCTCAAACCATGTAGAGAACAAT GGTTGCTGGTTTCATGAAGTTATTGATGAGGAGAATACCTAAAACTTATATGCTTGATTC TGCAGATTCTAACCCATTGGACCAGATCGCACAAAGCAAGGATGATGTACATTGTCCTTT GCAGAGTCCAATAAGGAAGGAGAATGTGCTGATAACATCAGACCGTGAATTAGAGAGAAC TAAGAGTGCTATTCTTGATAGCATCAAGCCAGAAGATAGTATAGAAGCCAAGATGGACAC TTTGTCAGGAGAAGTTACTACAGAAGACAAGGGGAAAGATCGAAATTGTGATGTAGTTTA TGATGAGGCAGATGATATCAACTCTCTTGCGTCAATTGAGGAGTTATTGGGATTGCATTT CAAAGAGATGGTAGAAAAGAGGTGTGAGAACTGTTCCAATGTCGCTCAGAAGGCAAGCCC TATAAGTGGTAAAGATGGTGAACAGACGGTGGCATGTACCAATGTGAATAGGACAGTTGA TGGAGACCAGGCTGAACAGTCAGAGAGGAAAACATGCCAAAGTGAGCAATCTAGCGATTT GGTCAGATTGGATGGGGAATGCAGTTCTTCAAGTAGGCAGCCACATGTTGCTGATGCACA GCATCAAGTTATGCCAACAGAGGACACTATGACCAAAGGAGACATTTCAGGGATGAGTCA CGGTGAAAAAGACTCATCCTCTTTCAGCATAGTCAATCAAAAACCTGAATGTCTTGAGTG TGCCCAAGAAGATGTACCTGACTGCCATCTAGGTGAGAAGCCAGTCAACCTGTCGAGTGG CCAGTGCCAAAATGCCAACACTGAAGATCAGGGAAGGAGGAAGCAAGTAAATCTACACCA AGTGGAAGAAAACCAATATGATCAGCAAGATAGGAACGAAGGTGCGATTAAGACATCTCT TATTAGCAAGCTGCCACCTGTGTTAGTCATCCAGCTCAAGAGAAATACGGGGCCTATTAA AGTGAGGCGACACGTGAGCTTCAAGGAGATCCTTGATGTGGGACTGTTCCTGCACCCCAG GTACTGAGTAATTTAGTCTGTCCTTTTTTGTTGCACTCTTGTTATGAGCATGTGGGCTAC CGTATACTGTGTGCGCATTTGTTTTTGTTTATCGAATTGAACCAGAAAAGCAAAACAAGC ATGCAGCCATCGATATGTAAAAATGAATTTACCTGGCATGGTGACTTGGTGAGCT