Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os08t0526500-01
CDS Infomation	cds chromosome:IRGSP-1.0:8:26198221:26201552:1 gene:Os08g0526500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SOX-1 protein. (Os08t0526500-01)
Sequence	ATGTACTCCGATAGTGTCTCCGGGCGGAAGCGCTCCGTCATGGACCGCCTCGGATCGGGC GGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGAGGCGGCGGAGGCTCTCGCCCG CGGCCTGACTCCGTGAAGAGGTTTCGTCAGGCAGATGGGACTTGGAGACGTGAACTTTAT ATGGACTCTGTGGGAGTTCAAAGTTCATCTGGAGTTCCTTCCAGAAATATCCAAGGAAAC CAGAAACCACATTTGCAGCAAAACACTCAGGTTATGAGGAAATCATCAGTTCCAGATCTT CGTGAAAAATTGTCTGGAGTTCAGCGGCCTCAGTTGAATAGTACTGTACAGATCCCAAAG TCTGTACCGGAGATATCAACGAGCGCTAAACCTGTTCAAAAGAGGGAACCTGTCCAAAAG AGGGAACCCCCTGTTAATGCGGCCCTTCCTGCTACTAAGAAAGTGAACGAACCATCTGCA CCAAAGCAATGCCAGGAAAAGACTGATTCCTCTCTTGATAGATTACTGAAGTCTCTTGAT GTAGAGAAGTACTCAATAAATTTTCAGGCTGAAGAGGTTGATATGAAGGCTCTGCTTCAC ATGAATGAGGAAGACATGAAGTCTTTAGGAATTCCAATGGGGCCTCGGAAAAAGATATTG TCAGCATTGGCTTCCAAGAAGAAGAAATTATCAAAATCATTACCTACCAGTTGA

Peptide Sequence

PEP ID	Os08t0526500-01
PEP Infomation	pep chromosome:IRGSP-1.0:8:26198221:26201552:1 gene:Os08g0526500 transcript:Os08t0526500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SOX-1 protein. (Os08t0526500-01)
Sequence	MYSDSVSGRKRSVMDRLGSGGGGGGGGGGGGGGGGGGSRPRPDSVKRFRQADGTWRRELY MDSVGVQSSSGVPSRNIQGNQKPHLQQNTQVMRKSSVPDLREKLSGVQRPQLNSTVQIPK SVPEISTSAKPVQKREPVQKREPPVNAALPATKKVNEPSAPKQCQEKTDSSLDRLLKSLD VEKYSINFQAEEVDMKALLHMNEEDMKSLGIPMGPRKKILSALASKKKKLSKSLPTS

Transcript Sequence

Transcript ID	Os08t0526500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:8:26198221:26201552:1 gene:Os08g0526500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SOX-1 protein. (Os08t0526500-01)
Sequence	ATTCCGCCTCCTCCGGCCTCTCCACCGCTGCCCCCCTCGCCGCCGACGAAAACCCTAGCG GCATCGCCTCCGCCGCCGCCGCGATGTACTCCGATAGTGTCTCCGGGCGGAAGCGCTCCG TCATGGACCGCCTCGGATCGGGCGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTGGCGGTG GAGGCGGCGGAGGCTCTCGCCCGCGGCCTGACTCCGTGAAGAGGTTTCGTCAGGCAGATG GGACTTGGAGACGTGAACTTTATATGGACTCTGTGGGAGTTCAAAGTTCATCTGGAGTTC CTTCCAGAAATATCCAAGGAAACCAGAAACCACATTTGCAGCAAAACACTCAGGTTATGA GGAAATCATCAGTTCCAGATCTTCGTGAAAAATTGTCTGGAGTTCAGCGGCCTCAGTTGA ATAGTACTGTACAGATCCCAAAGTCTGTACCGGAGATATCAACGAGCGCTAAACCTGTTC AAAAGAGGGAACCTGTCCAAAAGAGGGAACCCCCTGTTAATGCGGCCCTTCCTGCTACTA AGAAAGTGAACGAACCATCTGCACCAAAGCAATGCCAGGAAAAGACTGATTCCTCTCTTG ATAGATTACTGAAGTCTCTTGATGTAGAGAAGTACTCAATAAATTTTCAGGCTGAAGAGG TTGATATGAAGGCTCTGCTTCACATGAATGAGGAAGACATGAAGTCTTTAGGAATTCCAA TGGGGCCTCGGAAAAAGATATTGTCAGCATTGGCTTCCAAGAAGAAGAAATTATCAAAAT CATTACCTACCAGTTGAATAGTTGATGCATCTTTAAACGTAGTAGCTAGATGACATGTTG ATTTGGATGTGTGCACTGCCAGGATCAACCCAAGTAACCCCATTTCTTGTATAAGATTTC CATCGAGATGATGTACAAATAGAGAACTGTGATCTAGCAGTGCTGTTGTGAGGCAATTAA CAGCTTGTCAATAGGAGTTATGTTCTGATATTATGCGGATATTTAGATGCCAACATATGA TGCATCGGAATTATTTTCCCGTATCATGTAAACCCAGCCCATTATTAGCGTGCACAGCTA GGGAGATAAGGAGATTTTATTTGTATCGGCTTTTGGGGGTTTC